Click here to switch to the map view.

The map label for this gene is rprY [H]

Identifier: 150009413

GI number: 150009413

Start: 3363579

End: 3364262

Strand: Reverse

Name: rprY [H]

Synonym: BDI_2821

Alternate gene names: 150009413

Gene position: 3364262-3363579 (Counterclockwise)

Preceding gene: 150009414

Following gene: 150009412

Centisome position: 69.92

GC content: 49.27

Gene sequence:

>684_bases
ATGAAATCGACATTGAAAATACTTTTCGCTGACGATGACTTTAAGTATTCCCTCGTCTTGAAGCGATTCTTGGAACGGGA
GGGGTATGAGGTGACTTATACCGGCAATGGTACCATGGCTTTGAAGCAATTCCCGGTCGTGAAACCGGATCTGGTCTTGC
TGGATATCAACATGCCCGGCCTAAACGGTTTCGAGGTAGCGGAAAAGATCCGTGAGCAAGACCGTCATGTCTTGATCTTT
TTCCTTTCCGACCGTTCCGATAAGAACGACCGTTTGAAAGGTTTTAGCTTGCGCGGAAACGATTACTTGGCGAAACCCTT
CTATCCGGAAGAGCTGATCGCCCGTATCAAGGACCGTTTTGAGATCGGTGTCCATGAAAGCGTGCAGGAGGAGAGTTTCC
ATTTCGGAAACACGACCTTCAACTACACCACGAACGAGATCCGTACGGGTAATAACAAGGTATTGATCACTTCCCGCCAA
GCGGATCTTCTGCGAATCCTGGCGACAAACCTGAATCTGGCGGTGGATCGTGACCTTCTGTTGGAAACCGTCTGGGGAAC
TAGCTCATACGCCAACTCCCTGGCCTTGAATGTGCAGGTCACCTATCTCCGTAAAGCGCTTCATAACGATCCGTCTACCG
GCATCGTATCCTTGCCGAAGAAAGGATATATGCTAAGAGGATAG

Upstream 100 bases:

>100_bases
ACGTTCGCCAAATAGTAGAGGCGCATCATGGTTCAGTATCCCTGCGAAGTGAATTAGGTGAAGGCACTCGAATTACTATA
AATCTACCTACTGCAGCTTT

Downstream 100 bases:

>100_bases
AATTTATCCGGTAGAATTGGGTTTCTGATCCGTAAGCATTATCTTTGTCCCACAAAGTATTCACAGAAAGAAAATGAATC
ATATATGAACTTCAGCGAAC

Product: two-component system response regulator

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 227; Mature: 227

Protein sequence:

>227_residues
MKSTLKILFADDDFKYSLVLKRFLEREGYEVTYTGNGTMALKQFPVVKPDLVLLDINMPGLNGFEVAEKIREQDRHVLIF
FLSDRSDKNDRLKGFSLRGNDYLAKPFYPEELIARIKDRFEIGVHESVQEESFHFGNTTFNYTTNEIRTGNNKVLITSRQ
ADLLRILATNLNLAVDRDLLLETVWGTSSYANSLALNVQVTYLRKALHNDPSTGIVSLPKKGYMLRG

Sequences:

>Translated_227_residues
MKSTLKILFADDDFKYSLVLKRFLEREGYEVTYTGNGTMALKQFPVVKPDLVLLDINMPGLNGFEVAEKIREQDRHVLIF
FLSDRSDKNDRLKGFSLRGNDYLAKPFYPEELIARIKDRFEIGVHESVQEESFHFGNTTFNYTTNEIRTGNNKVLITSRQ
ADLLRILATNLNLAVDRDLLLETVWGTSSYANSLALNVQVTYLRKALHNDPSTGIVSLPKKGYMLRG
>Mature_227_residues
MKSTLKILFADDDFKYSLVLKRFLEREGYEVTYTGNGTMALKQFPVVKPDLVLLDINMPGLNGFEVAEKIREQDRHVLIF
FLSDRSDKNDRLKGFSLRGNDYLAKPFYPEELIARIKDRFEIGVHESVQEESFHFGNTTFNYTTNEIRTGNNKVLITSRQ
ADLLRILATNLNLAVDRDLLLETVWGTSSYANSLALNVQVTYLRKALHNDPSTGIVSLPKKGYMLRG

Specific function: Member of the two-component regulatory system rprX/rprY [H]

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 response regulatory domain [H]

Homologues:

Organism=Escherichia coli, GI1789809, Length=217, Percent_Identity=27.1889400921659, Blast_Score=105, Evalue=3e-24,
Organism=Escherichia coli, GI1786599, Length=204, Percent_Identity=27.4509803921569, Blast_Score=96, Evalue=3e-21,
Organism=Escherichia coli, GI1786784, Length=222, Percent_Identity=25.6756756756757, Blast_Score=87, Evalue=6e-19,
Organism=Escherichia coli, GI1786911, Length=206, Percent_Identity=27.6699029126214, Blast_Score=86, Evalue=2e-18,
Organism=Escherichia coli, GI1790860, Length=223, Percent_Identity=25.1121076233184, Blast_Score=84, Evalue=1e-17,
Organism=Escherichia coli, GI87082012, Length=222, Percent_Identity=23.8738738738739, Blast_Score=80, Evalue=8e-17,
Organism=Escherichia coli, GI1790552, Length=203, Percent_Identity=27.0935960591133, Blast_Score=79, Evalue=3e-16,
Organism=Escherichia coli, GI1787229, Length=224, Percent_Identity=24.5535714285714, Blast_Score=77, Evalue=1e-15,
Organism=Escherichia coli, GI1790863, Length=237, Percent_Identity=27.8481012658228, Blast_Score=75, Evalue=4e-15,
Organism=Escherichia coli, GI2367329, Length=229, Percent_Identity=30.5676855895196, Blast_Score=75, Evalue=4e-15,
Organism=Escherichia coli, GI1789402, Length=206, Percent_Identity=24.2718446601942, Blast_Score=74, Evalue=1e-14,
Organism=Escherichia coli, GI145693140, Length=230, Percent_Identity=26.0869565217391, Blast_Score=72, Evalue=3e-14,
Organism=Escherichia coli, GI1788394, Length=116, Percent_Identity=31.0344827586207, Blast_Score=70, Evalue=1e-13,
Organism=Escherichia coli, GI1788713, Length=103, Percent_Identity=39.8058252427184, Blast_Score=65, Evalue=3e-12,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR011006
- InterPro:   IPR001867
- InterPro:   IPR001789
- InterPro:   IPR011991 [H]

Pfam domain/function: PF00072 Response_reg; PF00486 Trans_reg_C [H]

EC number: NA

Molecular weight: Translated: 25960; Mature: 25960

Theoretical pI: Translated: 8.70; Mature: 8.70

Prosite motif: PS50110 RESPONSE_REGULATORY

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
1.8 %Met     (Translated Protein)
1.8 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
1.8 %Met     (Mature Protein)
1.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKSTLKILFADDDFKYSLVLKRFLEREGYEVTYTGNGTMALKQFPVVKPDLVLLDINMPG
CCCEEEEEEECCCCCHHHHHHHHHHHCCCEEEEECCCEEEEEECCCCCCCEEEEEECCCC
LNGFEVAEKIREQDRHVLIFFLSDRSDKNDRLKGFSLRGNDYLAKPFYPEELIARIKDRF
CCHHHHHHHHHHCCCEEEEEEEECCCCCCCCEEEEEECCCCEEECCCCHHHHHHHHHHHH
EIGVHESVQEESFHFGNTTFNYTTNEIRTGNNKVLITSRQADLLRILATNLNLAVDRDLL
CCCCCCCHHHCCEECCCEEEEEECCEEECCCCEEEEEECCHHHHHHHHHCCCEEECHHHH
LETVWGTSSYANSLALNVQVTYLRKALHNDPSTGIVSLPKKGYMLRG
HHHHCCCCCCCCEEEEEEEHHHHHHHHCCCCCCCEEECCCCCCEECC
>Mature Secondary Structure
MKSTLKILFADDDFKYSLVLKRFLEREGYEVTYTGNGTMALKQFPVVKPDLVLLDINMPG
CCCEEEEEEECCCCCHHHHHHHHHHHCCCEEEEECCCEEEEEECCCCCCCEEEEEECCCC
LNGFEVAEKIREQDRHVLIFFLSDRSDKNDRLKGFSLRGNDYLAKPFYPEELIARIKDRF
CCHHHHHHHHHHCCCEEEEEEEECCCCCCCCEEEEEECCCCEEECCCCHHHHHHHHHHHH
EIGVHESVQEESFHFGNTTFNYTTNEIRTGNNKVLITSRQADLLRILATNLNLAVDRDLL
CCCCCCCHHHCCEECCCEEEEEECCEEECCCCEEEEEECCHHHHHHHHHCCCEEECHHHH
LETVWGTSSYANSLALNVQVTYLRKALHNDPSTGIVSLPKKGYMLRG
HHHHCCCCCCCCEEEEEEEHHHHHHHHCCCCCCCEEECCCCCCEECC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 8469117 [H]