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The map label for this gene is rfaQ [C]

Identifier: 150009411

GI number: 150009411

Start: 3361834

End: 3362889

Strand: Reverse

Name: rfaQ [C]

Synonym: BDI_2819

Alternate gene names: 150009411

Gene position: 3362889-3361834 (Counterclockwise)

Preceding gene: 150009412

Following gene: 150009410

Centisome position: 69.89

GC content: 50.85

Gene sequence:

>1056_bases
ATGGCAAATATATTAGTAATACGACTTTCGGCTATCGGGGATGTGGCGATGACCGTTCCCGTTATCTATTCCGCAGCCAA
GGCGAATCCTACGGACTCGTTTACCGTGTTGACGCAAGCGTTCTTGATCCCGGTTTTTATCAACCGCCCGAAGAACGTGA
ACGTGATCGGTATCAATACGAAGAGCACGGAGAAAACGTTGGCGGGATTGCTTCGTTTTGCCTCTGCCTTGGTGAAATAC
GATTTCGATATGGTGCTGGATTTGCACGATGTGTTGCGAACCATGATTATCCGTACGCTGTTCCGCTTGAACGGCAGACG
AGTGTTTGTCGTGGATAAGGCCCGGAAAGATCGTGCCCGGTTGACCGACGCGAAGCATAAACGATTTAAACAACTTCGCC
CGGTGATCGAACGTTATGCGGATGTGTTCCGTAACGCCGGACTTCATTATACGGAATCGTTCACCTCGCTTTATGAGACC
TCGACCCCTGATTTATCCGCCTTGGAACCCCTTGCGGGAACGAAGACGGGCAAATGGATCGGTATCGCCCCCTTCGCCAA
GCACCGGGGAAAGATTTATCCGACCGGGGAGATGGAGCTGGTCATGGCCGAGCTTTCCGATCGAGAGGATTTTACCATCT
TCCTGTTCGGTGGTCGTGGCTACGAGGAGGCGCTCTTGGATCAATGGGCTTTTGAGTATCCCCGGGTAAAAAGCGTGGCG
GGCAAGTATTCCTTGGATCAGGAACTGGCCTTGATCAGCCGGTTGGATCTGTTGATTTGCATGGATTCCGCCAATATGCA
TTTCGCTTCCTTGGTCGGTACACGGGTGCTTTCCGTTTGGGGCGCTACCCATCCCTATGCCGGATTTTACGGATATCATC
AGGATCCGGAAGATTGTATCCAGTTGGACTTACCTTGCCGTCCTTGTTCCGTATTTGGCCAAAAGCCCTGCCTGCGGAAG
GATTGGGCGTGTATGAGACAGCTCAATCCGGATCTAATCATAAACAAGGTATTAACCTCTTTAAATGAAATGGTTTCGGA
TGAAGGAGGTCATTAA

Upstream 100 bases:

>100_bases
TATCCGATATCCGTGACGGTAAGAAATACATGAAGGTCTACAAGCAAATGAAGATGTACAACGACCCGGCCTTGAATCCT
GTGTTGTACGGTAAGAAATA

Downstream 100 bases:

>100_bases
CCCGGCGTACGGGCGATTCGAGGATTTTGTAAGGCGTGTACCTCGTATATTTTCGGAAGAGGGAAAAACGATTTATAAGG
CGAGGAATGAGATCAAGGTT

Product: glycosyltransferase family 9

Products: NA

Alternate protein names: ADP-HeptoseLPS Heptosyltransferase II; Lipopolysaccharide Core Biosynthesis Protein Rfaq; Glycosyl Transferase Family Protein; ADP-Heptose LPS Heptosyltransferase; ADP-HeptoseLPS Heptosyltransferase; Heptosyltransferase Family Protein; ADP-Heptose-LPS Heptosyltransferase; Lipopolysaccharide Heptosyltransferase II; Lipopolysaccharide Heptosyltransferase III; Lipopolysaccharide Core Biosynthesis Protein; Lipopolysaccharide Core Biosynthesis Protein RfaQ; LPS Heptosyltransferase II; Family 9 Glycosyl Transferase

Number of amino acids: Translated: 351; Mature: 350

Protein sequence:

>351_residues
MANILVIRLSAIGDVAMTVPVIYSAAKANPTDSFTVLTQAFLIPVFINRPKNVNVIGINTKSTEKTLAGLLRFASALVKY
DFDMVLDLHDVLRTMIIRTLFRLNGRRVFVVDKARKDRARLTDAKHKRFKQLRPVIERYADVFRNAGLHYTESFTSLYET
STPDLSALEPLAGTKTGKWIGIAPFAKHRGKIYPTGEMELVMAELSDREDFTIFLFGGRGYEEALLDQWAFEYPRVKSVA
GKYSLDQELALISRLDLLICMDSANMHFASLVGTRVLSVWGATHPYAGFYGYHQDPEDCIQLDLPCRPCSVFGQKPCLRK
DWACMRQLNPDLIINKVLTSLNEMVSDEGGH

Sequences:

>Translated_351_residues
MANILVIRLSAIGDVAMTVPVIYSAAKANPTDSFTVLTQAFLIPVFINRPKNVNVIGINTKSTEKTLAGLLRFASALVKY
DFDMVLDLHDVLRTMIIRTLFRLNGRRVFVVDKARKDRARLTDAKHKRFKQLRPVIERYADVFRNAGLHYTESFTSLYET
STPDLSALEPLAGTKTGKWIGIAPFAKHRGKIYPTGEMELVMAELSDREDFTIFLFGGRGYEEALLDQWAFEYPRVKSVA
GKYSLDQELALISRLDLLICMDSANMHFASLVGTRVLSVWGATHPYAGFYGYHQDPEDCIQLDLPCRPCSVFGQKPCLRK
DWACMRQLNPDLIINKVLTSLNEMVSDEGGH
>Mature_350_residues
ANILVIRLSAIGDVAMTVPVIYSAAKANPTDSFTVLTQAFLIPVFINRPKNVNVIGINTKSTEKTLAGLLRFASALVKYD
FDMVLDLHDVLRTMIIRTLFRLNGRRVFVVDKARKDRARLTDAKHKRFKQLRPVIERYADVFRNAGLHYTESFTSLYETS
TPDLSALEPLAGTKTGKWIGIAPFAKHRGKIYPTGEMELVMAELSDREDFTIFLFGGRGYEEALLDQWAFEYPRVKSVAG
KYSLDQELALISRLDLLICMDSANMHFASLVGTRVLSVWGATHPYAGFYGYHQDPEDCIQLDLPCRPCSVFGQKPCLRKD
WACMRQLNPDLIINKVLTSLNEMVSDEGGH

Specific function: Lipopolysaccharide core biosynthesis. [C]

COG id: COG0859

COG function: function code M; ADP-heptose:LPS heptosyltransferase

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: 2.-.-.- [C]

Molecular weight: Translated: 39548; Mature: 39417

Theoretical pI: Translated: 8.55; Mature: 8.55

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.7 %Cys     (Translated Protein)
2.8 %Met     (Translated Protein)
4.6 %Cys+Met (Translated Protein)
1.7 %Cys     (Mature Protein)
2.6 %Met     (Mature Protein)
4.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MANILVIRLSAIGDVAMTVPVIYSAAKANPTDSFTVLTQAFLIPVFINRPKNVNVIGINT
CCCEEEEEECCCCHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHCCCCCCEEEEEECC
KSTEKTLAGLLRFASALVKYDFDMVLDLHDVLRTMIIRTLFRLNGRRVFVVDKARKDRAR
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEECCCHHHHH
LTDAKHKRFKQLRPVIERYADVFRNAGLHYTESFTSLYETSTPDLSALEPLAGTKTGKWI
HHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHCCCCCHHHHCCCCCCCCCCEE
GIAPFAKHRGKIYPTGEMELVMAELSDREDFTIFLFGGRGYEEALLDQWAFEYPRVKSVA
EECCHHHHCCCCCCCCCHHEEEEECCCCCCEEEEEECCCCHHHHHHHHHHHCCCHHHHHH
GKYSLDQELALISRLDLLICMDSANMHFASLVGTRVLSVWGATHPYAGFYGYHQDPEDCI
CCCCCHHHHHHHHHHCEEEEECCCCCHHHHHHHHHHHHHHCCCCCCCCCCCCCCCHHHHE
QLDLPCRPCSVFGQKPCLRKDWACMRQLNPDLIINKVLTSLNEMVSDEGGH
EECCCCCCHHHCCCCCCCHHHHHHHHHCCHHHHHHHHHHHHHHHHCCCCCC
>Mature Secondary Structure 
ANILVIRLSAIGDVAMTVPVIYSAAKANPTDSFTVLTQAFLIPVFINRPKNVNVIGINT
CCEEEEEECCCCHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHCCCCCCEEEEEECC
KSTEKTLAGLLRFASALVKYDFDMVLDLHDVLRTMIIRTLFRLNGRRVFVVDKARKDRAR
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEECCCHHHHH
LTDAKHKRFKQLRPVIERYADVFRNAGLHYTESFTSLYETSTPDLSALEPLAGTKTGKWI
HHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHCCCCCHHHHCCCCCCCCCCEE
GIAPFAKHRGKIYPTGEMELVMAELSDREDFTIFLFGGRGYEEALLDQWAFEYPRVKSVA
EECCHHHHCCCCCCCCCHHEEEEECCCCCCEEEEEECCCCHHHHHHHHHHHCCCHHHHHH
GKYSLDQELALISRLDLLICMDSANMHFASLVGTRVLSVWGATHPYAGFYGYHQDPEDCI
CCCCCHHHHHHHHHHCEEEEECCCCCHHHHHHHHHHHHHHCCCCCCCCCCCCCCCHHHHE
QLDLPCRPCSVFGQKPCLRKDWACMRQLNPDLIINKVLTSLNEMVSDEGGH
EECCCCCCHHHCCCCCCCHHHHHHHHHCCHHHHHHHHHHHHHHHHCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: Glycosyltransferases; Transferring other glycosyl groups [C]

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA