| Definition | Parabacteroides distasonis ATCC 8503 chromosome, complete genome. |
|---|---|
| Accession | NC_009615 |
| Length | 4,811,379 |
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The map label for this gene is 150009363
Identifier: 150009363
GI number: 150009363
Start: 3305277
End: 3305858
Strand: Direct
Name: 150009363
Synonym: BDI_2771
Alternate gene names: NA
Gene position: 3305277-3305858 (Clockwise)
Preceding gene: 150009362
Following gene: 150009364
Centisome position: 68.7
GC content: 48.8
Gene sequence:
>582_bases ATGGGAAACAACAAAATTATAGGCGCGAAAATTAAAAATATCCGGGAATCGAAACAACTCTCTATCGAGGAGGTAGCCGA ACGCTCCGGGTTAGGTATCGAACAGATCGAACGTATCGAGGGTAACTTGGATTTTCCATCTTTGGCCCCTCTTATCAAAA TAGCACGGGTATTAGGGGTACGTTTGGGTACATTCTTGGATGACCAAGCGGAGCTAGGCCCGGTCGTATGCCGCAAAAAG GACAGCGAGGCCGATGGTATCGGGTTCACGAACAACGCGACACAAGGGCACAAGCATATGGATTACCACTCGCTCTCGCA AGATAAGTCCGGCCGCCATATGGAACCCTTCTTGATCGAGATCGCTCCCTCCGAGGAAGGCGAGGATTTCATCCTGTCCA CGCATGAGGGAGAGGAGTTTATCTACGTATTGAATGGCGTCGTAGAGATCAATTACGGAAAGAACACCTATATCCTAGAG GAAGGCGATAGCATCTATTATGATTCCATCGTGGCGCATCATGTACATGCGGCAGCCGACAACAAGGCCCGAATCCTAGG AGTTGTCTATACACCTTATTAA
Upstream 100 bases:
>100_bases TTTGTCTTAATCCTAGATATAATAAAATATTAATGTAAATTTGCGCCGTTTAGTATCAAATTATCAAACATTACAGGACT ATAAATAACAAATCATACAC
Downstream 100 bases:
>100_bases ATCCAGCGTTTTATGGAATTACATAACAGAACCCTTGGCCAATGGCTGGAACATTGGGCCGAGACTACACCGGACAAGGA ATATATCGTTTATTCGGACC
Product: transcriptional regulator
Products: NA
Alternate protein names: Transcriptional Regulator XRE Family; XRE Family Transcriptional Regulator; MerR Family Transcriptional Regulator; Cupin 2 Domain-Containing Protein; Cro/CI Family Transcriptional Regulator; Transcriptional Regulator MerR Family; HTH-Type Transcriptional Regulator; Transcriptional Regulator Protein; Cupin Domain Protein; Phosphate Butyryltransferase; Cupin 2 Barrel Domain-Containing Protein; Transcriptional Regulator Merr Family; Regulatory Protein; Cupin 2 Conserved Barrel Domain Protein; Transcription Regulator Protein; Cupin Sensor Transcriptional Regulator; Transcriptional Regulator-Like Protein; Cupin 2 Conserved Barrel Domain-Containing Protein; Transcriptional Regulator Cro/CI Family; Transcriptional Regulator Xre Family; Transcription Regulator; XRE Family-Like Protein; Transcriptional Regulator XRE Family With Cupin Sensor; Epoxidase; Helix-Turn-Helix Domain-Containing Protein; Helix-Turn-Helix Domain Protein; Transcriptional Regulator XRE Family Protein; Helix-Turn-Helix Transcriptional Regulator; Phosphotransbutyrylase; Helix-Turn-Helix Family Protein
Number of amino acids: Translated: 193; Mature: 192
Protein sequence:
>193_residues MGNNKIIGAKIKNIRESKQLSIEEVAERSGLGIEQIERIEGNLDFPSLAPLIKIARVLGVRLGTFLDDQAELGPVVCRKK DSEADGIGFTNNATQGHKHMDYHSLSQDKSGRHMEPFLIEIAPSEEGEDFILSTHEGEEFIYVLNGVVEINYGKNTYILE EGDSIYYDSIVAHHVHAAADNKARILGVVYTPY
Sequences:
>Translated_193_residues MGNNKIIGAKIKNIRESKQLSIEEVAERSGLGIEQIERIEGNLDFPSLAPLIKIARVLGVRLGTFLDDQAELGPVVCRKK DSEADGIGFTNNATQGHKHMDYHSLSQDKSGRHMEPFLIEIAPSEEGEDFILSTHEGEEFIYVLNGVVEINYGKNTYILE EGDSIYYDSIVAHHVHAAADNKARILGVVYTPY >Mature_192_residues GNNKIIGAKIKNIRESKQLSIEEVAERSGLGIEQIERIEGNLDFPSLAPLIKIARVLGVRLGTFLDDQAELGPVVCRKKD SEADGIGFTNNATQGHKHMDYHSLSQDKSGRHMEPFLIEIAPSEEGEDFILSTHEGEEFIYVLNGVVEINYGKNTYILEE GDSIYYDSIVAHHVHAAADNKARILGVVYTPY
Specific function: Unknown
COG id: COG1396
COG function: function code K; Predicted transcriptional regulators
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 21425; Mature: 21294
Theoretical pI: Translated: 4.85; Mature: 4.85
Prosite motif: PS50943 HTH_CROC1
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.5 %Cys (Translated Protein) 1.6 %Met (Translated Protein) 2.1 %Cys+Met (Translated Protein) 0.5 %Cys (Mature Protein) 1.0 %Met (Mature Protein) 1.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MGNNKIIGAKIKNIRESKQLSIEEVAERSGLGIEQIERIEGNLDFPSLAPLIKIARVLGV CCCCCEEHHHHHHHHHHHCCCHHHHHHHCCCCHHHHHHHCCCCCCCHHHHHHHHHHHHHH RLGTFLDDQAELGPVVCRKKDSEADGIGFTNNATQGHKHMDYHSLSQDKSGRHMEPFLIE HHHHCCCCCCCCCCEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEE IAPSEEGEDFILSTHEGEEFIYVLNGVVEINYGKNTYILEEGDSIYYDSIVAHHVHAAAD ECCCCCCCEEEEEECCCCEEEEEEEEEEEEEECCCEEEEECCCCEEHHHHHHHHHHHCCC NKARILGVVYTPY CCEEEEEEEECCC >Mature Secondary Structure GNNKIIGAKIKNIRESKQLSIEEVAERSGLGIEQIERIEGNLDFPSLAPLIKIARVLGV CCCCEEHHHHHHHHHHHCCCHHHHHHHCCCCHHHHHHHCCCCCCCHHHHHHHHHHHHHH RLGTFLDDQAELGPVVCRKKDSEADGIGFTNNATQGHKHMDYHSLSQDKSGRHMEPFLIE HHHHCCCCCCCCCCEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEE IAPSEEGEDFILSTHEGEEFIYVLNGVVEINYGKNTYILEEGDSIYYDSIVAHHVHAAAD ECCCCCCCEEEEEECCCCEEEEEEEEEEEEEECCCEEEEECCCCEEHHHHHHHHHHHCCC NKARILGVVYTPY CCEEEEEEEECCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA