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The map label for this gene is ycfF [C]

Identifier: 150009349

GI number: 150009349

Start: 3285412

End: 3285807

Strand: Reverse

Name: ycfF [C]

Synonym: BDI_2757

Alternate gene names: 150009349

Gene position: 3285807-3285412 (Counterclockwise)

Preceding gene: 150009350

Following gene: 150009346

Centisome position: 68.29

GC content: 46.46

Gene sequence:

>396_bases
ATGGCAACTATTTTCAGTAGAATCGTGGCGGGTGAGATCCCTAGCCACAAGGTTGCGGAAGACGATGAGTTTTTTGCTTT
CCTCGATATCAATCCGGTAGCCTTGGGGCATACCTTGGTAATTCCTAAGAAGGAGGTCGATTATATCTTTGATATCGATG
ATCCGATGCTGGGACGGATGGTAGCTTTCGCTAAACGGGTAGCTCGTGCTCAAGAGACCGCTATCGAGTGTAAGCGTGTA
GGATTGGCTGTCATGGGTTTGGAAGTGCCCCATGCGCATATCCATTTGATTCCTATCACGAAGGAGTCCGATATGTATTT
CGGCGGGAAGAAATTGGCTGTAAGTCAAGAAGAATTGGCCGAGATCGCCGCTAAGATTAGAAAAGAATTCAAATAA

Upstream 100 bases:

>100_bases
TGATGGGAAAGAAGGTAGGGGATGTCGTTGAGATCCGTGTGCCTTCCGGCTTGATGACGTTTGAGATTATGGATATTTCA
ATTTAAAAACAGAAAGACGT

Downstream 100 bases:

>100_bases
TTGAATATAATTTTTTAATTATAAAAAATTGGTTATATTTGTACCCGCTGTTTTATGCGTGACAATATCATGCAAAGGGG
ACAGCAAATCATTAATATGA

Product: histidine triad (HIT) family protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 131; Mature: 130

Protein sequence:

>131_residues
MATIFSRIVAGEIPSHKVAEDDEFFAFLDINPVALGHTLVIPKKEVDYIFDIDDPMLGRMVAFAKRVARAQETAIECKRV
GLAVMGLEVPHAHIHLIPITKESDMYFGGKKLAVSQEELAEIAAKIRKEFK

Sequences:

>Translated_131_residues
MATIFSRIVAGEIPSHKVAEDDEFFAFLDINPVALGHTLVIPKKEVDYIFDIDDPMLGRMVAFAKRVARAQETAIECKRV
GLAVMGLEVPHAHIHLIPITKESDMYFGGKKLAVSQEELAEIAAKIRKEFK
>Mature_130_residues
ATIFSRIVAGEIPSHKVAEDDEFFAFLDINPVALGHTLVIPKKEVDYIFDIDDPMLGRMVAFAKRVARAQETAIECKRVG
LAVMGLEVPHAHIHLIPITKESDMYFGGKKLAVSQEELAEIAAKIRKEFK

Specific function: Unknown

COG id: COG0537

COG function: function code FGR; Diadenosine tetraphosphate (Ap4A) hydrolase and other HIT family hydrolases

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 HIT domain [H]

Homologues:

Organism=Saccharomyces cerevisiae, GI6320078, Length=99, Percent_Identity=42.4242424242424, Blast_Score=69, Evalue=3e-13,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR011146
- InterPro:   IPR011151
- InterPro:   IPR019808
- InterPro:   IPR001310 [H]

Pfam domain/function: PF01230 HIT [H]

EC number: NA

Molecular weight: Translated: 14606; Mature: 14475

Theoretical pI: Translated: 6.35; Mature: 6.35

Prosite motif: PS51084 HIT_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.8 %Cys     (Translated Protein)
3.8 %Met     (Translated Protein)
4.6 %Cys+Met (Translated Protein)
0.8 %Cys     (Mature Protein)
3.1 %Met     (Mature Protein)
3.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MATIFSRIVAGEIPSHKVAEDDEFFAFLDINPVALGHTLVIPKKEVDYIFDIDDPMLGRM
CHHHHHHHHHCCCCCCCCCCCCCEEEEEECCCEEECEEEEECCCCCCEEEECCCHHHHHH
VAFAKRVARAQETAIECKRVGLAVMGLEVPHAHIHLIPITKESDMYFGGKKLAVSQEELA
HHHHHHHHHHHHHHHHHHHHCEEEEEEECCCCEEEEEEECCCCCCEECCEEEEECHHHHH
EIAAKIRKEFK
HHHHHHHHHCC
>Mature Secondary Structure 
ATIFSRIVAGEIPSHKVAEDDEFFAFLDINPVALGHTLVIPKKEVDYIFDIDDPMLGRM
HHHHHHHHHCCCCCCCCCCCCCEEEEEECCCEEECEEEEECCCCCCEEEECCCHHHHHH
VAFAKRVARAQETAIECKRVGLAVMGLEVPHAHIHLIPITKESDMYFGGKKLAVSQEELA
HHHHHHHHHHHHHHHHHHHHCEEEEEEECCCCEEEEEEECCCCCCEECCEEEEECHHHHH
EIAAKIRKEFK
HHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 12788972 [H]