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The map label for this gene is ybjE [H]

Identifier: 150009325

GI number: 150009325

Start: 3244644

End: 3245270

Strand: Reverse

Name: ybjE [H]

Synonym: BDI_2727

Alternate gene names: 150009325

Gene position: 3245270-3244644 (Counterclockwise)

Preceding gene: 150009326

Following gene: 150009323

Centisome position: 67.45

GC content: 47.69

Gene sequence:

>627_bases
ATGAAAGGGAGTTTGATCGTCGTGGGCTTCTTTGCCTTGGGGTGCTTGCTGGGATGGAGCGGTTATCTGCCCGGGGTCAT
TATCGAGAATGATATAACGGTTTATGTACTTTACCTCTTGATGTTTCAAGTAGGGATTAGCATAGGAAGCGATAAGAAAC
TGAAAGAGATTTTGTCGAGCATACGGCCGAAACTCTTATTGGTGCCTCTGGCTACTATTATCGGGACGTTGAGCTTCTCG
GCCTTGATCAGCCTTGCTCTTACCAAATGGAGCGTGTTCGATTGTTTGGCGGTCGGAAGCGGTTTCGCCTATTATTCATT
ATCCTCCATCTTGATAACAGAGCTAAAAGAACCGACGCTGGGGGCTCAATTGGCGGCGGAGTTAGGAACGATCGCCTTGA
TCGCTAATATTATCCGTGAGATATTCGCCTTGCTGGGCGCTCCGTTGTTCGTTAGATATTTCGGAAGGCTATCTCCGATC
TGCGCGGGAGGAGCTACTACGATGGATACGACATTGCCGATTATCACCCGTTATTGCGGAAAGGATTTGGTCTTTGTCTC
CATTTTTCACGGGATCTTGGTGGACTTCACGGTTCCGTTTTTCGTTTCTTTCTTCTGTTCGATGTGA

Upstream 100 bases:

>100_bases
TGGGCGGGCAAGCCTTGTTGATTGCTTCGGCCGGTACGTTGGGGAGCGTCTTGGCGGCGTGGGGAGTTTATCATTTCTTT
TTTAAGGAAAGGAGCCGGGG

Downstream 100 bases:

>100_bases
GTGAAAGAGGCTTCCGAGATCTCGGAAACCACCTTGCAAGGTTGAAAAGTCGTTTCCGAGGCCTCGGAAGGCATTTTACA
AGGTTGAAAAGTCATTTCCG

Product: putative surface protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 208; Mature: 208

Protein sequence:

>208_residues
MKGSLIVVGFFALGCLLGWSGYLPGVIIENDITVYVLYLLMFQVGISIGSDKKLKEILSSIRPKLLLVPLATIIGTLSFS
ALISLALTKWSVFDCLAVGSGFAYYSLSSILITELKEPTLGAQLAAELGTIALIANIIREIFALLGAPLFVRYFGRLSPI
CAGGATTMDTTLPIITRYCGKDLVFVSIFHGILVDFTVPFFVSFFCSM

Sequences:

>Translated_208_residues
MKGSLIVVGFFALGCLLGWSGYLPGVIIENDITVYVLYLLMFQVGISIGSDKKLKEILSSIRPKLLLVPLATIIGTLSFS
ALISLALTKWSVFDCLAVGSGFAYYSLSSILITELKEPTLGAQLAAELGTIALIANIIREIFALLGAPLFVRYFGRLSPI
CAGGATTMDTTLPIITRYCGKDLVFVSIFHGILVDFTVPFFVSFFCSM
>Mature_208_residues
MKGSLIVVGFFALGCLLGWSGYLPGVIIENDITVYVLYLLMFQVGISIGSDKKLKEILSSIRPKLLLVPLATIIGTLSFS
ALISLALTKWSVFDCLAVGSGFAYYSLSSILITELKEPTLGAQLAAELGTIALIANIIREIFALLGAPLFVRYFGRLSPI
CAGGATTMDTTLPIITRYCGKDLVFVSIFHGILVDFTVPFFVSFFCSM

Specific function: Unknown

COG id: COG2431

COG function: function code S; Predicted membrane protein

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: To H.influenzae HI_1452 [H]

Homologues:

Organism=Escherichia coli, GI87081795, Length=207, Percent_Identity=31.8840579710145, Blast_Score=78, Evalue=4e-16,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR005642
- ProDom:   PD022789 [H]

Pfam domain/function: PF03956 DUF340 [H]

EC number: NA

Molecular weight: Translated: 22454; Mature: 22454

Theoretical pI: Translated: 7.82; Mature: 7.82

Prosite motif: PS00013 PROKAR_LIPOPROTEIN

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.4 %Cys     (Translated Protein)
1.9 %Met     (Translated Protein)
4.3 %Cys+Met (Translated Protein)
2.4 %Cys     (Mature Protein)
1.9 %Met     (Mature Protein)
4.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKGSLIVVGFFALGCLLGWSGYLPGVIIENDITVYVLYLLMFQVGISIGSDKKLKEILSS
CCCCEEEHHHHHHHHHHHHCCCCCCEEEECCHHHHHHHHHHHHHCCCCCCCHHHHHHHHH
IRPKLLLVPLATIIGTLSFSALISLALTKWSVFDCLAVGSGFAYYSLSSILITELKEPTL
HCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHCCCCH
GAQLAAELGTIALIANIIREIFALLGAPLFVRYFGRLSPICAGGATTMDTTLPIITRYCG
HHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHCCCHHCCCCCHHHHHHHHHHHHHC
KDLVFVSIFHGILVDFTVPFFVSFFCSM
CHHHHHHHHHHHHHHHHHHHHHHHHHCC
>Mature Secondary Structure
MKGSLIVVGFFALGCLLGWSGYLPGVIIENDITVYVLYLLMFQVGISIGSDKKLKEILSS
CCCCEEEHHHHHHHHHHHHCCCCCCEEEECCHHHHHHHHHHHHHCCCCCCCHHHHHHHHH
IRPKLLLVPLATIIGTLSFSALISLALTKWSVFDCLAVGSGFAYYSLSSILITELKEPTL
HCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHCCCCH
GAQLAAELGTIALIANIIREIFALLGAPLFVRYFGRLSPICAGGATTMDTTLPIITRYCG
HHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHCCCHHCCCCCHHHHHHHHHHHHHC
KDLVFVSIFHGILVDFTVPFFVSFFCSM
CHHHHHHHHHHHHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 8905232; 9278503 [H]