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The map label for this gene is 150009317

Identifier: 150009317

GI number: 150009317

Start: 3228446

End: 3228991

Strand: Reverse

Name: 150009317

Synonym: BDI_2719

Alternate gene names: NA

Gene position: 3228991-3228446 (Counterclockwise)

Preceding gene: 150009318

Following gene: 150009313

Centisome position: 67.11

GC content: 50.0

Gene sequence:

>546_bases
ATGGAACGATTCGCAGCCATTGACTTTGAGACCGCTAATGGAAAGCGGAGCAGTATTTGCAGTATAGGTATCGCCATATT
GGAGGATGACTGGGTAGTAGATAGCATTTATACCTTGGTACGTCCTACCCCTAATTTCTATACCCGTTGGACTACGGCCA
TACATGGATTGACTGCTGAGGATACGAATGACGCGTTATGTTTCGAGGAGGCTTGGGAAAGCATCGCCCCGAAACTAAAG
GATCTCCCCCTTGTTGCCCATAACAGTCCGTTTGATGAGGGATGCCTGAAAGCCGCCCACGAGGTGTATGACTTAGCCTA
TCCGAAATATTCCTTCTATTGCACTTGCCGTCTCTCCCGGAAGATGTACCCATTTCTGGTAAATCATCAGTTGCAGACAG
TAGCCGCCCACTGCGGTTACGACCTTACCCGACATCATAACGCCATGGCCGACGCTTACGCCTGTGCCCATATCGCCCTT
ACGATGATGCGGGAAAAAGAGGTCGATACCTTGGAGGCGCTTATGGCTTCCTGCTACTCTAGGTAA

Upstream 100 bases:

>100_bases
CTGGAGCCATAAATAATGAGAGGTTATTTGTAGAGACGGGGCACGCCCCGTCTCTACAAATAAATAAATAGTAAACGGAT
TAAAAACTAGTAATCTATCT

Downstream 100 bases:

>100_bases
CTATGGGGTGTTTTTCCCGGCTATTTTATCCACCACGACAGCGATAGCGCCATCTCCCGTCACGTTGCAAGCGGTGCCAA
AACTATCCATGGCAATATAA

Product: putative DNA polymerase III subunit epsilon

Products: diphosphate; DNAn+1

Alternate protein names: Exonuclease RNAse T And DNA Polymerase III; DNA Polymerase III Epsilon Subunit; DNA Polymerase III Subunit Epsilon; 3-5' Exonuclease; DNA Polymerase III Alpha Subunit; DNA-Directed DNA Polymerase III Epsilon Chain; DNA-Directed DNA Polymerase; DNAQ Family Exonuclease/DinG Family Helicase; Exonuclease DNA Polymerase III Epsilon Subunit Family; DNA-Directed DNA Polymerase III Epsilon Subunit; DNA Polymerase Subunit III; DNA Polymerase III Epsilon-Like Protein; DNA Polymerase III Alpha Subunit Gram-Positive Type; Exonuclease Family Protein; DNA Polymerase; DNA Polymerase III Alpha Chain; DNA Polymerase Subunit III Alpha; DNA Polymerase III PolC-Type; DNA Polymerase III Subunit Alpha; DNAQ Family Exonuclease; ATP-Dependent DNA Helicase; DNAq Family Exonuclease/Ding Family Helicase; DNA Polymerase III Epsilon Subunit-Like 3-5 Exonuclease; DNA-Directed DNA Polymerase III Subunit Epsilon; DNA Polymerase III PolC; Exonuclease With A BRCT Domain

Number of amino acids: Translated: 181; Mature: 181

Protein sequence:

>181_residues
MERFAAIDFETANGKRSSICSIGIAILEDDWVVDSIYTLVRPTPNFYTRWTTAIHGLTAEDTNDALCFEEAWESIAPKLK
DLPLVAHNSPFDEGCLKAAHEVYDLAYPKYSFYCTCRLSRKMYPFLVNHQLQTVAAHCGYDLTRHHNAMADAYACAHIAL
TMMREKEVDTLEALMASCYSR

Sequences:

>Translated_181_residues
MERFAAIDFETANGKRSSICSIGIAILEDDWVVDSIYTLVRPTPNFYTRWTTAIHGLTAEDTNDALCFEEAWESIAPKLK
DLPLVAHNSPFDEGCLKAAHEVYDLAYPKYSFYCTCRLSRKMYPFLVNHQLQTVAAHCGYDLTRHHNAMADAYACAHIAL
TMMREKEVDTLEALMASCYSR
>Mature_181_residues
MERFAAIDFETANGKRSSICSIGIAILEDDWVVDSIYTLVRPTPNFYTRWTTAIHGLTAEDTNDALCFEEAWESIAPKLK
DLPLVAHNSPFDEGCLKAAHEVYDLAYPKYSFYCTCRLSRKMYPFLVNHQLQTVAAHCGYDLTRHHNAMADAYACAHIAL
TMMREKEVDTLEALMASCYSR

Specific function: Unknown

COG id: COG0847

COG function: function code L; DNA polymerase III, epsilon subunit and related 3'-5' exonucleases

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: 2.7.7.7

Molecular weight: Translated: 20529; Mature: 20529

Theoretical pI: Translated: 5.51; Mature: 5.51

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

4.4 %Cys     (Translated Protein)
3.3 %Met     (Translated Protein)
7.7 %Cys+Met (Translated Protein)
4.4 %Cys     (Mature Protein)
3.3 %Met     (Mature Protein)
7.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MERFAAIDFETANGKRSSICSIGIAILEDDWVVDSIYTLVRPTPNFYTRWTTAIHGLTAE
CCCEEEEEEECCCCCCHHHHHHHEEEEECCHHHHHHHHHHCCCCCHHHHHHHHHCCCCCC
DTNDALCFEEAWESIAPKLKDLPLVAHNSPFDEGCLKAAHEVYDLAYPKYSFYCTCRLSR
CCCCCHHHHHHHHHHCCHHHCCCEEECCCCCHHHHHHHHHHHHHHCCCCEEEEEEEEECC
KMYPFLVNHQLQTVAAHCGYDLTRHHNAMADAYACAHIALTMMREKEVDTLEALMASCYS
CCCHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHC
R
C
>Mature Secondary Structure
MERFAAIDFETANGKRSSICSIGIAILEDDWVVDSIYTLVRPTPNFYTRWTTAIHGLTAE
CCCEEEEEEECCCCCCHHHHHHHEEEEECCHHHHHHHHHHCCCCCHHHHHHHHHCCCCCC
DTNDALCFEEAWESIAPKLKDLPLVAHNSPFDEGCLKAAHEVYDLAYPKYSFYCTCRLSR
CCCCCHHHHHHHHHHCCHHHCCCEEECCCCCHHHHHHHHHHHHHHCCCCEEEEEEEEECC
KMYPFLVNHQLQTVAAHCGYDLTRHHNAMADAYACAHIALTMMREKEVDTLEALMASCYS
CCCHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHC
R
C

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: deoxynucleoside triphosphate; DNAn

Specific reaction: deoxynucleoside triphosphate + DNA(n) = diphosphate + DNA(n+1)

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA