| Definition | Parabacteroides distasonis ATCC 8503 chromosome, complete genome. |
|---|---|
| Accession | NC_009615 |
| Length | 4,811,379 |
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The map label for this gene is 150009305
Identifier: 150009305
GI number: 150009305
Start: 3214140
End: 3216302
Strand: Reverse
Name: 150009305
Synonym: BDI_2707
Alternate gene names: NA
Gene position: 3216302-3214140 (Counterclockwise)
Preceding gene: 150009309
Following gene: 150009304
Centisome position: 66.85
GC content: 41.24
Gene sequence:
>2163_bases ATGAGAAAATTTATATATATCCTGGTCGTTTTTCTTTTTTTTATATCCTGTAATGACGAGACAGGGATATCTGTCGGAAA TGATGTAGGTGGTATAAAAATGAGATTGGTAATAACGAGTCCGTCTTCTACCGTTTATTCTAAGACAAAAGCTGAGATTG ATCAGCCCACTCATGAGTCTTTGATTAGTGAAGTTCAGGTATTGGTATTTGAGGACCAGAAATACCGGTATCGGGTACCT GGCATATCTATCAGTAGTAATATGGCACAAACAACATTCACGGTACTTCTGAAATCAACCTCCTTGCCTGTGGAATTGCT TATTTTGGCAAATACTGACGAAACTGTTGTTTCCAATGAACCGTCGTTGGACGATAGTAAAGAGGTCGTAAAAAAGAAGA TAAATCGGGAGTTTGATAATTTAGTTTCCAATTTCCCGATGTATGGCGAATATAAATTTCCTGCCGGACTGTCATCCACC GAAATGCAAGAAATCACCGGGATAAAGATGTTGCGCTCCATAGCCCGTGTGGATGTTGTTGCTACCGAAGCTGCAAATTT TAAACTGGCGGGAGTAAAAGCATATCGTGCTAATAATTCGCTGCAAGTGATTCCCAATGAAACGGGTTCTATGAAAGTAA CGACACCAAGCGTTCCCGACGGAAGTATGGCAAATGTAAGCAGCCGTATGTTTTCGGTCTCAGAGGAGGATCGGAATGAA TTCTCCGCACAACTTTATTTGCCGGAGGTCAGTTCTCCAGCCGAAGGCGACCGGGTGAGCAGTGCGACGTGTATCGTTGT AGGCGGTTACTATAATGGAAGTGAAAAGATGAGTTATTATCGTATGGATTTTGACCCGGACAATAAAGAGAATGCTTTTG GGCAAATCTTGCGTAATCACAAATATATATTTAATGTGAAAAAGGTTTCCGCTCCCGGATGGGATAATCCTGACGATGCG GCGAACAATCAGTCTGCACATATTGTGGCAGAAGTGCGACAATGGGATGATAATACGATCGATATGTCTTTTGACGGAGA GCATCATTTCGGAGTTTCCTCCCGTGAAATCATATTGAAGAATAAGGCTGGTTCTAAAGCTACTATAGAGGTGTTTACCG ACTTGTCCGACTACACATTACAGTGGGCGGATGAGAATGGTATGCCGATTGGAAGTGAGGGGCAATCATTGTCAAATGAT TATTTTACCGTAGAAAAGAATCTGGACGGCAGCCAGTTAGTTGTAACGGCCTTACAGAATAATATGTCTGGCGATGCTGG GCCGGTCCAGAACTTTGTCATTACTGCTCATCGGTGGAAAATCTTGGTGGCGATCAAGCAAAAATATAGCGTAGCAGCCA ATACGGTAATTAATTTGTTGACATTTAATGTCGGCTTAGGCAGTTTAGGTACTAATATTGTTGCTTCGGTACCTCCCGAC GCACGTGCAGACGGTTTAAGAGGCATATTGGATAATCAAAGTAATTTCGGTCCGAACGGGAATGTCGTCTGTGGAGGGTA TAATCTGATACGGTCCAACGTTAGTAATAATAGATTGACAGATGCCCTTTTTGCTGCTTTTGATGTCGTATATGTCCATT ATATGAGCAATGGTTATTTTGGAAATGAAGATGCGAAGAAAGTACATAATTGGTTGAATGCAAAAAAGAATCGTGTGCTA ATCGCTTCTTATGACGCTGCGGATGTAAGTAAATATCTGATCGATGAATTTTTAGGAGGAAATAGCAATATAAAATTTTT GACTGTCAATAATGGTGAGTTTACCGTAGCTCCATCAAGTGCGGATAATAGTTTCTTCACTTCTACTGGACCTTTTACAA GTGGATCTTATACTCCGGTCTCTTCGAGTTTCTCATTTCGTAACTACGATGCCTATCATGGTGAGATACTTTTGAACACT GAGTCGGCAAAAGGAATCACGCCACTCTTGACTGGGAAGGCTGGTGGTATCGTATTAGGAGTAGACTATTCGAGACGGAT CGTTTATATAGGAGATACGGATTTGGGGAATTCTTCATCTGGGACTGGAGGTACAAAAGATAACCGGATAAATAATACTT CAGGAGAGATAAATAATGATGCTTCCAAATTGATAGCCAATGTTTTTGCATGGATAACCAATGTCGTATTATATGGGGAA TAG
Upstream 100 bases:
>100_bases TAGTTATATTTTCTTGGGAAATGGAAATTCTTTAAAAGACAATGAGTTTGGTTGATGGAACAAAGGGAGGAGGATTTGTG TTCTATCTGAAAAATGCATC
Downstream 100 bases:
>100_bases GGAAAAGACTGAGGATGTATGTCTTTTGTTTGTTCTAAAAAGATTTGAATGAAATAAAAAGTTCTTACAAAATGCTGTTA TACGATTAAAAGCATTACTT
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 720; Mature: 720
Protein sequence:
>720_residues MRKFIYILVVFLFFISCNDETGISVGNDVGGIKMRLVITSPSSTVYSKTKAEIDQPTHESLISEVQVLVFEDQKYRYRVP GISISSNMAQTTFTVLLKSTSLPVELLILANTDETVVSNEPSLDDSKEVVKKKINREFDNLVSNFPMYGEYKFPAGLSST EMQEITGIKMLRSIARVDVVATEAANFKLAGVKAYRANNSLQVIPNETGSMKVTTPSVPDGSMANVSSRMFSVSEEDRNE FSAQLYLPEVSSPAEGDRVSSATCIVVGGYYNGSEKMSYYRMDFDPDNKENAFGQILRNHKYIFNVKKVSAPGWDNPDDA ANNQSAHIVAEVRQWDDNTIDMSFDGEHHFGVSSREIILKNKAGSKATIEVFTDLSDYTLQWADENGMPIGSEGQSLSND YFTVEKNLDGSQLVVTALQNNMSGDAGPVQNFVITAHRWKILVAIKQKYSVAANTVINLLTFNVGLGSLGTNIVASVPPD ARADGLRGILDNQSNFGPNGNVVCGGYNLIRSNVSNNRLTDALFAAFDVVYVHYMSNGYFGNEDAKKVHNWLNAKKNRVL IASYDAADVSKYLIDEFLGGNSNIKFLTVNNGEFTVAPSSADNSFFTSTGPFTSGSYTPVSSSFSFRNYDAYHGEILLNT ESAKGITPLLTGKAGGIVLGVDYSRRIVYIGDTDLGNSSSGTGGTKDNRINNTSGEINNDASKLIANVFAWITNVVLYGE
Sequences:
>Translated_720_residues MRKFIYILVVFLFFISCNDETGISVGNDVGGIKMRLVITSPSSTVYSKTKAEIDQPTHESLISEVQVLVFEDQKYRYRVP GISISSNMAQTTFTVLLKSTSLPVELLILANTDETVVSNEPSLDDSKEVVKKKINREFDNLVSNFPMYGEYKFPAGLSST EMQEITGIKMLRSIARVDVVATEAANFKLAGVKAYRANNSLQVIPNETGSMKVTTPSVPDGSMANVSSRMFSVSEEDRNE FSAQLYLPEVSSPAEGDRVSSATCIVVGGYYNGSEKMSYYRMDFDPDNKENAFGQILRNHKYIFNVKKVSAPGWDNPDDA ANNQSAHIVAEVRQWDDNTIDMSFDGEHHFGVSSREIILKNKAGSKATIEVFTDLSDYTLQWADENGMPIGSEGQSLSND YFTVEKNLDGSQLVVTALQNNMSGDAGPVQNFVITAHRWKILVAIKQKYSVAANTVINLLTFNVGLGSLGTNIVASVPPD ARADGLRGILDNQSNFGPNGNVVCGGYNLIRSNVSNNRLTDALFAAFDVVYVHYMSNGYFGNEDAKKVHNWLNAKKNRVL IASYDAADVSKYLIDEFLGGNSNIKFLTVNNGEFTVAPSSADNSFFTSTGPFTSGSYTPVSSSFSFRNYDAYHGEILLNT ESAKGITPLLTGKAGGIVLGVDYSRRIVYIGDTDLGNSSSGTGGTKDNRINNTSGEINNDASKLIANVFAWITNVVLYGE >Mature_720_residues MRKFIYILVVFLFFISCNDETGISVGNDVGGIKMRLVITSPSSTVYSKTKAEIDQPTHESLISEVQVLVFEDQKYRYRVP GISISSNMAQTTFTVLLKSTSLPVELLILANTDETVVSNEPSLDDSKEVVKKKINREFDNLVSNFPMYGEYKFPAGLSST EMQEITGIKMLRSIARVDVVATEAANFKLAGVKAYRANNSLQVIPNETGSMKVTTPSVPDGSMANVSSRMFSVSEEDRNE FSAQLYLPEVSSPAEGDRVSSATCIVVGGYYNGSEKMSYYRMDFDPDNKENAFGQILRNHKYIFNVKKVSAPGWDNPDDA ANNQSAHIVAEVRQWDDNTIDMSFDGEHHFGVSSREIILKNKAGSKATIEVFTDLSDYTLQWADENGMPIGSEGQSLSND YFTVEKNLDGSQLVVTALQNNMSGDAGPVQNFVITAHRWKILVAIKQKYSVAANTVINLLTFNVGLGSLGTNIVASVPPD ARADGLRGILDNQSNFGPNGNVVCGGYNLIRSNVSNNRLTDALFAAFDVVYVHYMSNGYFGNEDAKKVHNWLNAKKNRVL IASYDAADVSKYLIDEFLGGNSNIKFLTVNNGEFTVAPSSADNSFFTSTGPFTSGSYTPVSSSFSFRNYDAYHGEILLNT ESAKGITPLLTGKAGGIVLGVDYSRRIVYIGDTDLGNSSSGTGGTKDNRINNTSGEINNDASKLIANVFAWITNVVLYGE
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 78656; Mature: 78656
Theoretical pI: Translated: 4.89; Mature: 4.89
Prosite motif: PS00013 PROKAR_LIPOPROTEIN
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.4 %Cys (Translated Protein) 2.1 %Met (Translated Protein) 2.5 %Cys+Met (Translated Protein) 0.4 %Cys (Mature Protein) 2.1 %Met (Mature Protein) 2.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MRKFIYILVVFLFFISCNDETGISVGNDVGGIKMRLVITSPSSTVYSKTKAEIDQPTHES CCHHHHHHHHHHHHEECCCCCCCCCCCCCCCEEEEEEEECCCCCEEHHHHHHCCCCHHHH LISEVQVLVFEDQKYRYRVPGISISSNMAQTTFTVLLKSTSLPVELLILANTDETVVSNE HHHHEEEEEEECCCEEEECCCEEECCCCHHHEEEEEEECCCCCEEEEEEECCCCEEECCC PSLDDSKEVVKKKINREFDNLVSNFPMYGEYKFPAGLSSTEMQEITGIKMLRSIARVDVV CCCCCHHHHHHHHHHHHHHHHHHCCCCCCCEECCCCCCCHHHHHHHHHHHHHHHHHHEEE ATEAANFKLAGVKAYRANNSLQVIPNETGSMKVTTPSVPDGSMANVSSRMFSVSEEDRNE EECCCCEEEEEEEEEECCCCEEEEECCCCCEEEECCCCCCCCHHHHHHHHEECCCHHCCC FSAQLYLPEVSSPAEGDRVSSATCIVVGGYYNGSEKMSYYRMDFDPDNKENAFGQILRNH EEEEEEECCCCCCCCCCCCCCEEEEEEECEECCCCCCEEEEECCCCCCCCHHHHHHHHCC KYIFNVKKVSAPGWDNPDDAANNQSAHIVAEVRQWDDNTIDMSFDGEHHFGVSSREIILK EEEEEEEEECCCCCCCCCCCCCCCCEEEEEEEECCCCCEEEEEECCCCCCCCCCCEEEEE NKAGSKATIEVFTDLSDYTLQWADENGMPIGSEGQSLSNDYFTVEKNLDGSQLVVTALQN CCCCCEEEEEEEECCCCCEEEEECCCCCCCCCCCCCCCCCEEEEECCCCCCCEEEEEHHC NMSGDAGPVQNFVITAHRWKILVAIKQKYSVAANTVINLLTFNVGLGSLGTNIVASVPPD CCCCCCCCCCCEEEEEEEEEEEEEEECHHHHHHHHHEEEEEEECCCCCCCCCEEEECCCC ARADGLRGILDNQSNFGPNGNVVCGGYNLIRSNVSNNRLTDALFAAFDVVYVHYMSNGYF CCCCCCHHHHCCCCCCCCCCCEEECCHHHHHCCCCCCHHHHHHHHHHHHHHEEECCCCEE GNEDAKKVHNWLNAKKNRVLIASYDAADVSKYLIDEFLGGNSNIKFLTVNNGEFTVAPSS CCHHHHHHHHHHCCCCCEEEEEECCHHHHHHHHHHHHHCCCCCEEEEEECCCEEEECCCC ADNSFFTSTGPFTSGSYTPVSSSFSFRNYDAYHGEILLNTESAKGITPLLTGKAGGIVLG CCCCEEECCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEECCCCCCCCEEEECCCCCEEEE VDYSRRIVYIGDTDLGNSSSGTGGTKDNRINNTSGEINNDASKLIANVFAWITNVVLYGE ECCCCEEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHCEEEECC >Mature Secondary Structure MRKFIYILVVFLFFISCNDETGISVGNDVGGIKMRLVITSPSSTVYSKTKAEIDQPTHES CCHHHHHHHHHHHHEECCCCCCCCCCCCCCCEEEEEEEECCCCCEEHHHHHHCCCCHHHH LISEVQVLVFEDQKYRYRVPGISISSNMAQTTFTVLLKSTSLPVELLILANTDETVVSNE HHHHEEEEEEECCCEEEECCCEEECCCCHHHEEEEEEECCCCCEEEEEEECCCCEEECCC PSLDDSKEVVKKKINREFDNLVSNFPMYGEYKFPAGLSSTEMQEITGIKMLRSIARVDVV CCCCCHHHHHHHHHHHHHHHHHHCCCCCCCEECCCCCCCHHHHHHHHHHHHHHHHHHEEE ATEAANFKLAGVKAYRANNSLQVIPNETGSMKVTTPSVPDGSMANVSSRMFSVSEEDRNE EECCCCEEEEEEEEEECCCCEEEEECCCCCEEEECCCCCCCCHHHHHHHHEECCCHHCCC FSAQLYLPEVSSPAEGDRVSSATCIVVGGYYNGSEKMSYYRMDFDPDNKENAFGQILRNH EEEEEEECCCCCCCCCCCCCCEEEEEEECEECCCCCCEEEEECCCCCCCCHHHHHHHHCC KYIFNVKKVSAPGWDNPDDAANNQSAHIVAEVRQWDDNTIDMSFDGEHHFGVSSREIILK EEEEEEEEECCCCCCCCCCCCCCCCEEEEEEEECCCCCEEEEEECCCCCCCCCCCEEEEE NKAGSKATIEVFTDLSDYTLQWADENGMPIGSEGQSLSNDYFTVEKNLDGSQLVVTALQN CCCCCEEEEEEEECCCCCEEEEECCCCCCCCCCCCCCCCCEEEEECCCCCCCEEEEEHHC NMSGDAGPVQNFVITAHRWKILVAIKQKYSVAANTVINLLTFNVGLGSLGTNIVASVPPD CCCCCCCCCCCEEEEEEEEEEEEEEECHHHHHHHHHEEEEEEECCCCCCCCCEEEECCCC ARADGLRGILDNQSNFGPNGNVVCGGYNLIRSNVSNNRLTDALFAAFDVVYVHYMSNGYF CCCCCCHHHHCCCCCCCCCCCEEECCHHHHHCCCCCCHHHHHHHHHHHHHHEEECCCCEE GNEDAKKVHNWLNAKKNRVLIASYDAADVSKYLIDEFLGGNSNIKFLTVNNGEFTVAPSS CCHHHHHHHHHHCCCCCEEEEEECCHHHHHHHHHHHHHCCCCCEEEEEECCCEEEECCCC ADNSFFTSTGPFTSGSYTPVSSSFSFRNYDAYHGEILLNTESAKGITPLLTGKAGGIVLG CCCCEEECCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEECCCCCCCCEEEECCCCCEEEE VDYSRRIVYIGDTDLGNSSSGTGGTKDNRINNTSGEINNDASKLIANVFAWITNVVLYGE ECCCCEEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHCEEEECC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA