| Definition | Parabacteroides distasonis ATCC 8503 chromosome, complete genome. |
|---|---|
| Accession | NC_009615 |
| Length | 4,811,379 |
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The map label for this gene is folE
Identifier: 150009291
GI number: 150009291
Start: 3200763
End: 3201353
Strand: Reverse
Name: folE
Synonym: BDI_2693
Alternate gene names: 150009291
Gene position: 3201353-3200763 (Counterclockwise)
Preceding gene: 150009292
Following gene: 150009288
Centisome position: 66.54
GC content: 49.58
Gene sequence:
>591_bases ATGTCAGAAGTAAACGAAGAGACGCTACGTGCCCGGGAAGCTTTGGCCGGCCATTATAAGGAAGTATTGGGTTTGCTGGG TGAGGACGTGGAGCGTGAGGGTCTGCTTAAAACGCCGGAACGTGTAGCGAAAGCGATGCAGTTTTTAACCAAGGGATACC ATGAGGATCCGGAGGCGGTACTCCGTTCCGCCATGTTTCAGGAAGAGGATTACAAACAGATGGTTATCGTGAAAGATATC GATTTCTTCTCCCTTTGTGAGCATCATATGTTGCCTTTCTTTGGCAAGGCCCACGTGGCTTATATCCCCAAGAAATATAT TACGGGCTTAAGCAAGATCCCTAGGGTAGTGGATATCTTCGCCCGCCGCCTTCAGATACAGGAGCGTATGACGATGCAGA TCAAGGATTGCATCCAGAGGACCTTGGACCCGTTGGGCGTGATGGTCGTGATCGAGGCGCAGCATATGTGTATGCAGATG CGTGGCGTGGAGAAACAAAATTCCTTGACGACTACCTCTGATTTCACAGGCTTTTTCCAACAAGCTAAGACGCGCGAGGA GTTTATGAATCTGATCAAGCATAACCGCTGA
Upstream 100 bases:
>100_bases CCTATCATATGATGCGCCTGTTGATGGGTGCTTTCCCGAAATACGGGAAGGAAATGTATATCGTACGAGAAGAGATAAAA ATTCCCCTAAATTAAAGAGA
Downstream 100 bases:
>100_bases TGACTTAATACAAGTCGGCATGCGTACCAGTATCGGTCATGATCAAGACCAGTTCGGTATCGTTTTGTTGCCATATTAAG AGCCAGTCGCTTTTAATATG
Product: GTP cyclohydrolase I
Products: NA
Alternate protein names: GTP cyclohydrolase I; GTP-CH-I
Number of amino acids: Translated: 196; Mature: 195
Protein sequence:
>196_residues MSEVNEETLRAREALAGHYKEVLGLLGEDVEREGLLKTPERVAKAMQFLTKGYHEDPEAVLRSAMFQEEDYKQMVIVKDI DFFSLCEHHMLPFFGKAHVAYIPKKYITGLSKIPRVVDIFARRLQIQERMTMQIKDCIQRTLDPLGVMVVIEAQHMCMQM RGVEKQNSLTTTSDFTGFFQQAKTREEFMNLIKHNR
Sequences:
>Translated_196_residues MSEVNEETLRAREALAGHYKEVLGLLGEDVEREGLLKTPERVAKAMQFLTKGYHEDPEAVLRSAMFQEEDYKQMVIVKDI DFFSLCEHHMLPFFGKAHVAYIPKKYITGLSKIPRVVDIFARRLQIQERMTMQIKDCIQRTLDPLGVMVVIEAQHMCMQM RGVEKQNSLTTTSDFTGFFQQAKTREEFMNLIKHNR >Mature_195_residues SEVNEETLRAREALAGHYKEVLGLLGEDVEREGLLKTPERVAKAMQFLTKGYHEDPEAVLRSAMFQEEDYKQMVIVKDID FFSLCEHHMLPFFGKAHVAYIPKKYITGLSKIPRVVDIFARRLQIQERMTMQIKDCIQRTLDPLGVMVVIEAQHMCMQMR GVEKQNSLTTTSDFTGFFQQAKTREEFMNLIKHNR
Specific function: Tetrahydrofolate biosynthesis; first step. [C]
COG id: COG0302
COG function: function code H; GTP cyclohydrolase I
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the GTP cyclohydrolase I family
Homologues:
Organism=Homo sapiens, GI66932968, Length=180, Percent_Identity=57.2222222222222, Blast_Score=215, Evalue=3e-56, Organism=Homo sapiens, GI4503949, Length=180, Percent_Identity=57.2222222222222, Blast_Score=215, Evalue=3e-56, Organism=Homo sapiens, GI66932972, Length=139, Percent_Identity=56.8345323741007, Blast_Score=169, Evalue=1e-42, Organism=Homo sapiens, GI66932970, Length=139, Percent_Identity=56.8345323741007, Blast_Score=169, Evalue=1e-42, Organism=Escherichia coli, GI1788476, Length=197, Percent_Identity=39.0862944162437, Blast_Score=124, Evalue=6e-30, Organism=Caenorhabditis elegans, GI17560486, Length=182, Percent_Identity=54.3956043956044, Blast_Score=209, Evalue=6e-55, Organism=Saccharomyces cerevisiae, GI6321706, Length=179, Percent_Identity=54.1899441340782, Blast_Score=202, Evalue=2e-53, Organism=Drosophila melanogaster, GI24656782, Length=187, Percent_Identity=54.0106951871658, Blast_Score=194, Evalue=4e-50, Organism=Drosophila melanogaster, GI24656791, Length=187, Percent_Identity=54.0106951871658, Blast_Score=193, Evalue=5e-50, Organism=Drosophila melanogaster, GI24656796, Length=187, Percent_Identity=54.0106951871658, Blast_Score=193, Evalue=7e-50,
Paralogues:
None
Copy number: 420 Molecules/Cell In: Growth-Phase, Minimal-Media (Based on E. coli). [C]
Swissprot (AC and ID): GCH1_PARD8 (A6LFE8)
Other databases:
- EMBL: CP000140 - RefSeq: YP_001304034.1 - ProteinModelPortal: A6LFE8 - SMR: A6LFE8 - STRING: A6LFE8 - GeneID: 5307842 - GenomeReviews: CP000140_GR - KEGG: pdi:BDI_2693 - eggNOG: COG0302 - HOGENOM: HBG370191 - OMA: ARIVEMF - ProtClustDB: PRK09347 - BioCyc: PDIS435591:BDI_2693-MONOMER - GO: GO:0005737 - HAMAP: MF_00223 - InterPro: IPR001474 - InterPro: IPR020602 - InterPro: IPR018234 - TIGRFAMs: TIGR00063
Pfam domain/function: PF01227 GTP_cyclohydroI
EC number: =3.5.4.16
Molecular weight: Translated: 22802; Mature: 22671
Theoretical pI: Translated: 7.20; Mature: 7.20
Prosite motif: PS00859 GTP_CYCLOHYDROL_1_1; PS00860 GTP_CYCLOHYDROL_1_2
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.5 %Cys (Translated Protein) 6.1 %Met (Translated Protein) 7.7 %Cys+Met (Translated Protein) 1.5 %Cys (Mature Protein) 5.6 %Met (Mature Protein) 7.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSEVNEETLRAREALAGHYKEVLGLLGEDVEREGLLKTPERVAKAMQFLTKGYHEDPEAV CCCCHHHHHHHHHHHHHHHHHHHHHHCCCHHHCCCCCCHHHHHHHHHHHHCCCCCCHHHH LRSAMFQEEDYKQMVIVKDIDFFSLCEHHMLPFFGKAHVAYIPKKYITGLSKIPRVVDIF HHHHHHHHHHHHHHHHHCCCCHHHHHHHHHCCHHCCHHHHHCCHHHHHHHHHHHHHHHHH ARRLQIQERMTMQIKDCIQRTLDPLGVMVVIEAQHMCMQMRGVEKQNSLTTTSDFTGFFQ HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHCCCCCHHHHHHHHH QAKTREEFMNLIKHNR HHHHHHHHHHHHHCCC >Mature Secondary Structure SEVNEETLRAREALAGHYKEVLGLLGEDVEREGLLKTPERVAKAMQFLTKGYHEDPEAV CCCHHHHHHHHHHHHHHHHHHHHHHCCCHHHCCCCCCHHHHHHHHHHHHCCCCCCHHHH LRSAMFQEEDYKQMVIVKDIDFFSLCEHHMLPFFGKAHVAYIPKKYITGLSKIPRVVDIF HHHHHHHHHHHHHHHHHCCCCHHHHHHHHHCCHHCCHHHHHCCHHHHHHHHHHHHHHHHH ARRLQIQERMTMQIKDCIQRTLDPLGVMVVIEAQHMCMQMRGVEKQNSLTTTSDFTGFFQ HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHCCCCCHHHHHHHHH QAKTREEFMNLIKHNR HHHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA