| Definition | Parabacteroides distasonis ATCC 8503 chromosome, complete genome. |
|---|---|
| Accession | NC_009615 |
| Length | 4,811,379 |
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The map label for this gene is 150009288
Identifier: 150009288
GI number: 150009288
Start: 3197293
End: 3199452
Strand: Reverse
Name: 150009288
Synonym: BDI_2690
Alternate gene names: NA
Gene position: 3199452-3197293 (Counterclockwise)
Preceding gene: 150009291
Following gene: 150009287
Centisome position: 66.5
GC content: 44.95
Gene sequence:
>2160_bases ATGAGCAGGAATTTTTTTATAGTAGTTCTATTGACAATTGGTTCTTTTAGCGGTTGGGGACAGGTCGATACGATAGCGGA CCAGAAGCTACAGGAGGTGGTGATAATGGCTAAGCTCCCTACGGTAGAGATGAAACCGGGGAAGATGACTTATAGGCTGG ATGCCTCTATCACCCAAAGCCAAGGGAATGTCTACGACGTGTTGACCAGTTTGCCGGGAATCGTGATACAAAACGATGGC ACTATTTTCTTGAATGGTCAAAACGGAGCGAATATCTTGATGGATGGTAAGCCGACCTATTTATCGGGGCAAGATCTTGT CAACCTCTTAAAATCGACTCCTGCCTCCATTACAGATAAAATCGATTTGATTACGCAGCCATCGGCACGTTACGACGCTA GTGGAAACTCCGGTATTATCGATATACGTACGAAGAAGATATTGCGAAGGGGAATGAACCTTTCGGTAAATGGTAGTTAT GACCAAGGTAAATATGGGGAAGGTTTCGCTTCTACTACCTTGAATCTGCGGACGAATAAGTTCAACTTCTATCTCTCTTA TTCCTATTCCCGGAAGAATGATTACGATGATTTGTATGTGGAGAGAAGCTATCTGGAAGGTTGGCGGCCGGAAGGGGAGA CCGGGCAGATGACGCAATCTTCCTATCGAACTTGGAAGAATAAGTCAAACTATTATCGTTTCGGGATCGATTATCAAATG TCGGAAAAGACTACGATAGGGCTTTCCACGGATGGAAATCTGGCGGGTAGCAAGGTTGAGGGAGACATGAACTCATCCAT TCCTAAGCGATCTCCGCAAACCGGAGGTTTGCTTCGTACCTTGAACGACCAGAATCGTTCGCGGGATAATTTTACGGCTG TTTTAAGTTTAACACATACCTTTAACTCCGATGGCGGGGTCTTGGATGCCTCTATGGACTACTTGCGTTATCGATACGAG GAAGATCAATATTTGAATAGCCAAGATACCTTGTTTGGGGATATGGGTGGAGGAATCCATTTATACTCCGGACAAGTGAA TCTGGTGTGGCCTTTCTCGAAATCCTTCACGTTCCATGCGGGCGCCAAGACCTCTTTCGTCTCTATCGATAATAACGCTG ATTATAATCGGCTACAAGGCGACTCTTGGCAGTCGGACCATGACTTGAGTTGTGATTTTCAGTATGACGAGAATATAAAC GCAGGCTATATACAGCTTGACGCCAAATTCTCTTCGGTAAGTCTGGAGGCAGGTCTTCGTCTGGAGAATACCCGTATAGA GGGTGAACAGTCGGGTAACGCTTATCAAAGAGACTCCTCCTTTACCAATCATTATACACATTTATTCCCTACGCTTTCTG TTCAGTATGCCTTGAGGAATGGGAATAGTCTGTCGCTTACTTATGGCAAACGGATTGTCCGTCCGAATTACCGGGACCTG AATCCGTTTGTATATATCCACGATGAGTATACGTATGATAAAGGTAACACCTTATTACGCCCGGAATTATCCGATAATCT GGAACTGGCCTATATATATGGCGATTTATTCCGGGTGGGGCTTGCTTTCAATTATACGAAGGATGTAATTATCAAGAGCT ATTTGGATCAAGGGAACTATGTTGTTTATGTCTCACCGGAAAATCTCTCTTCCCGCGTCAGCGTAGGTCCTCGGCTCAGT ACCTCCCAGTTACCGCTAACCTCATTTTGGAACGTGAACGTCAGCGCATCCTGGATCTATAACCGGTATCGTTTGCCGGA GAATTATCAAGTAAAGGTGAATGAGAGATGGACACCGAATATCGGGATCTCGAATCAGTTTAACTTTGCCCGGACTTGGA GCGCTGAACTTATCGGTTTCTATAATGGGAAAATGGCGGCGGGACAAGCTACGATCTATCCGTTATGGCAAATAAATGCC GGTATCCAGAAGAAGATATGGAAAGGCCGGGGAACGATCCAGTTATTCGCACGGGATATTTTCCATTCAAATGTATCGAG AATGAGCGTGATGACTCCCACCCAGCACGCTTTTATAAAAGAGCGGATGAACCGGACGGTAGTCGGTATTTCATTGACCT ATCGTATAAATCGTGGTTTGGAGGTGAAAGAATCTCGCCGGAAGCATAGCGTAGATGAAAGTAAAAGAATAAATTTGTGA
Upstream 100 bases:
>100_bases CAAAAGTAGGAGATTTTACCTTTCATCCCCCGGATACTTCCGTTGGTCACAATAATTTGATTGGATATTCCTGCTGATGT AATTTTGATATAAAAACGAC
Downstream 100 bases:
>100_bases AACCTCTAGACAAATGGTTTATGAAAAAGATATATAAGTGGGTATATGCCATGATTTTTGCGGTCTCTTTGTATTCTTGT ATCCGCTGGGTAACGGATTA
Product: hypothetical protein
Products: NA
Alternate protein names: NB-Dependent Receptor Plug; NB-Dependent Outer Membrane Receptor; Nb-Dependent Receptor Plug; Nb-Dependent Receptor; NB Dependent Receptor; NB-Dependent Receptor Exported Protein; NB-Dependent Receptor Domain-Containing Protein; NB Dependent/Ligand-Gated Channel; Outer Membrane Receptor Family Transporter; Nb-Dependent Outer Membrane Receptor; Outer Membrane Receptor For Ferrienterochelin And Colicin; Outer Membrane Receptor Protein Mostly Fe Transport; Protein Containing nB-Dependent Receptor Plug Domain
Number of amino acids: Translated: 719; Mature: 718
Protein sequence:
>719_residues MSRNFFIVVLLTIGSFSGWGQVDTIADQKLQEVVIMAKLPTVEMKPGKMTYRLDASITQSQGNVYDVLTSLPGIVIQNDG TIFLNGQNGANILMDGKPTYLSGQDLVNLLKSTPASITDKIDLITQPSARYDASGNSGIIDIRTKKILRRGMNLSVNGSY DQGKYGEGFASTTLNLRTNKFNFYLSYSYSRKNDYDDLYVERSYLEGWRPEGETGQMTQSSYRTWKNKSNYYRFGIDYQM SEKTTIGLSTDGNLAGSKVEGDMNSSIPKRSPQTGGLLRTLNDQNRSRDNFTAVLSLTHTFNSDGGVLDASMDYLRYRYE EDQYLNSQDTLFGDMGGGIHLYSGQVNLVWPFSKSFTFHAGAKTSFVSIDNNADYNRLQGDSWQSDHDLSCDFQYDENIN AGYIQLDAKFSSVSLEAGLRLENTRIEGEQSGNAYQRDSSFTNHYTHLFPTLSVQYALRNGNSLSLTYGKRIVRPNYRDL NPFVYIHDEYTYDKGNTLLRPELSDNLELAYIYGDLFRVGLAFNYTKDVIIKSYLDQGNYVVYVSPENLSSRVSVGPRLS TSQLPLTSFWNVNVSASWIYNRYRLPENYQVKVNERWTPNIGISNQFNFARTWSAELIGFYNGKMAAGQATIYPLWQINA GIQKKIWKGRGTIQLFARDIFHSNVSRMSVMTPTQHAFIKERMNRTVVGISLTYRINRGLEVKESRRKHSVDESKRINL
Sequences:
>Translated_719_residues MSRNFFIVVLLTIGSFSGWGQVDTIADQKLQEVVIMAKLPTVEMKPGKMTYRLDASITQSQGNVYDVLTSLPGIVIQNDG TIFLNGQNGANILMDGKPTYLSGQDLVNLLKSTPASITDKIDLITQPSARYDASGNSGIIDIRTKKILRRGMNLSVNGSY DQGKYGEGFASTTLNLRTNKFNFYLSYSYSRKNDYDDLYVERSYLEGWRPEGETGQMTQSSYRTWKNKSNYYRFGIDYQM SEKTTIGLSTDGNLAGSKVEGDMNSSIPKRSPQTGGLLRTLNDQNRSRDNFTAVLSLTHTFNSDGGVLDASMDYLRYRYE EDQYLNSQDTLFGDMGGGIHLYSGQVNLVWPFSKSFTFHAGAKTSFVSIDNNADYNRLQGDSWQSDHDLSCDFQYDENIN AGYIQLDAKFSSVSLEAGLRLENTRIEGEQSGNAYQRDSSFTNHYTHLFPTLSVQYALRNGNSLSLTYGKRIVRPNYRDL NPFVYIHDEYTYDKGNTLLRPELSDNLELAYIYGDLFRVGLAFNYTKDVIIKSYLDQGNYVVYVSPENLSSRVSVGPRLS TSQLPLTSFWNVNVSASWIYNRYRLPENYQVKVNERWTPNIGISNQFNFARTWSAELIGFYNGKMAAGQATIYPLWQINA GIQKKIWKGRGTIQLFARDIFHSNVSRMSVMTPTQHAFIKERMNRTVVGISLTYRINRGLEVKESRRKHSVDESKRINL >Mature_718_residues SRNFFIVVLLTIGSFSGWGQVDTIADQKLQEVVIMAKLPTVEMKPGKMTYRLDASITQSQGNVYDVLTSLPGIVIQNDGT IFLNGQNGANILMDGKPTYLSGQDLVNLLKSTPASITDKIDLITQPSARYDASGNSGIIDIRTKKILRRGMNLSVNGSYD QGKYGEGFASTTLNLRTNKFNFYLSYSYSRKNDYDDLYVERSYLEGWRPEGETGQMTQSSYRTWKNKSNYYRFGIDYQMS EKTTIGLSTDGNLAGSKVEGDMNSSIPKRSPQTGGLLRTLNDQNRSRDNFTAVLSLTHTFNSDGGVLDASMDYLRYRYEE DQYLNSQDTLFGDMGGGIHLYSGQVNLVWPFSKSFTFHAGAKTSFVSIDNNADYNRLQGDSWQSDHDLSCDFQYDENINA GYIQLDAKFSSVSLEAGLRLENTRIEGEQSGNAYQRDSSFTNHYTHLFPTLSVQYALRNGNSLSLTYGKRIVRPNYRDLN PFVYIHDEYTYDKGNTLLRPELSDNLELAYIYGDLFRVGLAFNYTKDVIIKSYLDQGNYVVYVSPENLSSRVSVGPRLST SQLPLTSFWNVNVSASWIYNRYRLPENYQVKVNERWTPNIGISNQFNFARTWSAELIGFYNGKMAAGQATIYPLWQINAG IQKKIWKGRGTIQLFARDIFHSNVSRMSVMTPTQHAFIKERMNRTVVGISLTYRINRGLEVKESRRKHSVDESKRINL
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 81600; Mature: 81469
Theoretical pI: Translated: 9.08; Mature: 9.08
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.1 %Cys (Translated Protein) 2.1 %Met (Translated Protein) 2.2 %Cys+Met (Translated Protein) 0.1 %Cys (Mature Protein) 1.9 %Met (Mature Protein) 2.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSRNFFIVVLLTIGSFSGWGQVDTIADQKLQEVVIMAKLPTVEMKPGKMTYRLDASITQS CCCCEEEEEEEEECCCCCCCCCHHHHHHHHHHEEEEEECCCEEECCCEEEEEEECEEECC QGNVYDVLTSLPGIVIQNDGTIFLNGQNGANILMDGKPTYLSGQDLVNLLKSTPASITDK CCCCHHHHHHCCCEEEECCCEEEEECCCCCEEEECCCCCEECHHHHHHHHHCCCCCCCCC IDLITQPSARYDASGNSGIIDIRTKKILRRGMNLSVNGSYDQGKYGEGFASTTLNLRTNK EEEEECCCCCCCCCCCCCEEEEEHHHHHHCCCCEEECCCCCCCCCCCCEEEEEEEEEEEE FNFYLSYSYSRKNDYDDLYVERSYLEGWRPEGETGQMTQSSYRTWKNKSNYYRFGIDYQM EEEEEEEEECCCCCCCHHEEEHHHHCCCCCCCCCCCCCHHHHHHHCCCCCEEEEEEEEEE SEKTTIGLSTDGNLAGSKVEGDMNSSIPKRSPQTGGLLRTLNDQNRSRDNFTAVLSLTHT CCCEEEEECCCCCCCCCEECCCCCCCCCCCCCCCCCEEEECCCCCCCCCCEEEEEEEEEE FNSDGGVLDASMDYLRYRYEEDQYLNSQDTLFGDMGGGIHLYSGQVNLVWPFSKSFTFHA ECCCCCEEECCHHHHHEECCCHHCCCCCCCEEECCCCCEEEEECEEEEEEECCCCEEEEC GAKTSFVSIDNNADYNRLQGDSWQSDHDLSCDFQYDENINAGYIQLDAKFSSVSLEAGLR CCCEEEEEECCCCCCCCCCCCCCCCCCCCEEEEEECCCCCCCEEEEECEECEEEEECCCE LENTRIEGEQSGNAYQRDSSFTNHYTHLFPTLSVQYALRNGNSLSLTYGKRIVRPNYRDL EEEEEECCCCCCCCEECCCCCCCCEEEEECCEEEEEEECCCCEEEEECCCEEECCCCCCC NPFVYIHDEYTYDKGNTLLRPELSDNLELAYIYGDLFRVGLAFNYTKDVIIKSYLDQGNY CCEEEEEEEEEECCCCEEECCCCCCCEEEEEEEECHHHEEEEECCHHHHHHHHHHCCCCE VVYVSPENLSSRVSVGPRLSTSQLPLTSFWNVNVSASWIYNRYRLPENYQVKVNERWTPN EEEECCCCCCCCEECCCCCCCCCCCCEEEEEECEEEEEEEEEEECCCCCEEEECCCCCCC IGISNQFNFARTWSAELIGFYNGKMAAGQATIYPLWQINAGIQKKIWKGRGTIQLFARDI CCCCCCCCEEEECCEEEEEEECCEEECCCEEEEEEEEECCCHHHHHHCCCCEEEEEEHHH FHSNVSRMSVMTPTQHAFIKERMNRTVVGISLTYRINRGLEVKESRRKHSVDESKRINL HHCCCCEEEEECCCHHHHHHHHCCCEEEEEEEEEEECCCCCCHHHHHHCCCCCHHCCCC >Mature Secondary Structure SRNFFIVVLLTIGSFSGWGQVDTIADQKLQEVVIMAKLPTVEMKPGKMTYRLDASITQS CCCEEEEEEEEECCCCCCCCCHHHHHHHHHHEEEEEECCCEEECCCEEEEEEECEEECC QGNVYDVLTSLPGIVIQNDGTIFLNGQNGANILMDGKPTYLSGQDLVNLLKSTPASITDK CCCCHHHHHHCCCEEEECCCEEEEECCCCCEEEECCCCCEECHHHHHHHHHCCCCCCCCC IDLITQPSARYDASGNSGIIDIRTKKILRRGMNLSVNGSYDQGKYGEGFASTTLNLRTNK EEEEECCCCCCCCCCCCCEEEEEHHHHHHCCCCEEECCCCCCCCCCCCEEEEEEEEEEEE FNFYLSYSYSRKNDYDDLYVERSYLEGWRPEGETGQMTQSSYRTWKNKSNYYRFGIDYQM EEEEEEEEECCCCCCCHHEEEHHHHCCCCCCCCCCCCCHHHHHHHCCCCCEEEEEEEEEE SEKTTIGLSTDGNLAGSKVEGDMNSSIPKRSPQTGGLLRTLNDQNRSRDNFTAVLSLTHT CCCEEEEECCCCCCCCCEECCCCCCCCCCCCCCCCCEEEECCCCCCCCCCEEEEEEEEEE FNSDGGVLDASMDYLRYRYEEDQYLNSQDTLFGDMGGGIHLYSGQVNLVWPFSKSFTFHA ECCCCCEEECCHHHHHEECCCHHCCCCCCCEEECCCCCEEEEECEEEEEEECCCCEEEEC GAKTSFVSIDNNADYNRLQGDSWQSDHDLSCDFQYDENINAGYIQLDAKFSSVSLEAGLR CCCEEEEEECCCCCCCCCCCCCCCCCCCCEEEEEECCCCCCCEEEEECEECEEEEECCCE LENTRIEGEQSGNAYQRDSSFTNHYTHLFPTLSVQYALRNGNSLSLTYGKRIVRPNYRDL EEEEEECCCCCCCCEECCCCCCCCEEEEECCEEEEEEECCCCEEEEECCCEEECCCCCCC NPFVYIHDEYTYDKGNTLLRPELSDNLELAYIYGDLFRVGLAFNYTKDVIIKSYLDQGNY CCEEEEEEEEEECCCCEEECCCCCCCEEEEEEEECHHHEEEEECCHHHHHHHHHHCCCCE VVYVSPENLSSRVSVGPRLSTSQLPLTSFWNVNVSASWIYNRYRLPENYQVKVNERWTPN EEEECCCCCCCCEECCCCCCCCCCCCEEEEEECEEEEEEEEEEECCCCCEEEECCCCCCC IGISNQFNFARTWSAELIGFYNGKMAAGQATIYPLWQINAGIQKKIWKGRGTIQLFARDI CCCCCCCCEEEECCEEEEEEECCEEECCCEEEEEEEEECCCHHHHHHCCCCEEEEEEHHH FHSNVSRMSVMTPTQHAFIKERMNRTVVGISLTYRINRGLEVKESRRKHSVDESKRINL HHCCCCEEEEECCCHHHHHHHHCCCEEEEEEEEEEECCCCCCHHHHHHCCCCCHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA