| Definition | Parabacteroides distasonis ATCC 8503 chromosome, complete genome. |
|---|---|
| Accession | NC_009615 |
| Length | 4,811,379 |
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The map label for this gene is 150009248
Identifier: 150009248
GI number: 150009248
Start: 3131474
End: 3133069
Strand: Reverse
Name: 150009248
Synonym: BDI_2650
Alternate gene names: NA
Gene position: 3133069-3131474 (Counterclockwise)
Preceding gene: 150009250
Following gene: 150009245
Centisome position: 65.12
GC content: 46.05
Gene sequence:
>1596_bases ATGAACAAGAATTTTATCTCTGTTTTTCTTCTGATGCTCGCTATGGGCGTATCTGTTATGGCCCAGAGTTATGAGGAAGA TTTGGCTTTTTTCAAGGAACGAGTAAAGACTTTAGGCTCGGATGAGTTCGGAGGGCGTAAGCCTTTGACCGAGTATGAGA CGAAAACAATCCATTACATCGCTGATGAATTTAAGAAACTAGGTCTTCAACCTGCTAATGGCGATAGTTATTTCCAGCCG GTGAAGGAAATATCTACTTTTACCCGTCCGGTAAAGGATAAGATCACGGTGAAATGCGCGAAAGGGTCTATGGATTTGAA GTTCTCGGATGATATTGTCGTTTGGACGAACCGGGGAACTGAGCAGGTAGTTATCCCTACTACGGACTATGTGTTCTGTG GGTTTGGCATTAATGCGCCGGAATATGGATGGAACGATTATGCGAATGTAGACGTGAAGGGGAAAATCGTTATCGCTATG GTGAATGATCCCGGTTTTTATGATACGTCTTTGTTCCGTGGAAAGAACATGACTTATTATGGCCGTTGGACTTATAAGTT CGAGGAGGCGCAACGCCAAGGTGCCGCAGGTTTATTGGTTCTTCATAACGAGGCGGCCGCTTCGTATGGTTGGAAGGTCT GTCAGGCTTCTCACGTGCAGACAAATATCGCTCTTTGCTCGGAGACAATGAATGCGGAAGCTTTGGGCATGAAGGGATGG CTCTCGGAGGAGGCTTGCAAGAAAATGTTCGCCCTTAGCGGATTGAATTTTGATGAGACGATTGCCGCGGCGAAGAAACC GGGTTTCAAGAGTTTTACGATGAAGGCGAAAAGTAAGGTTATATTAAATGTAAAGATGACTGTAGGCGAGTCTCATAACG TGGCGGCTGTTTTACCGGGCACGGACCTGAAAGACGAATACTTGGTTTTTACCGCTCACTGGGATCATTTTGGGATCGGC ACGCCGATAGATGGGGACAGTATCTATAATGGCGCTAGCGATAATGCTTCGGGCGTGGCAACCTTAATGTTATTAGCTAA GAAATATCAATCATTGCCTGTTCATCCCCGTCGTTCCATCGTATTCGTGGCGGTGACTTCCGAGGAATGTGGCTTATTAG GTTCTCAGTACTATTGTGAGCATCCTTTGTTCCCTTTATCTAAAACGGCTATTAACTTGAACTTTGACGGCACGGCTCCG CGTGAGCGTACCCATGATGTTTCTCTCCGGGCTGCGGGTAAGACGGATACGGATGCCTTGGTGATCGCTATGGCCTCGGC ACAAGGACGGACCGTGAAGGTTATTACCGAAGATCCTGCGGGTGGTTATTTCCGTTCCGATCATTTTAATTTCGTGAAAA AAGGCGTACCTACGATTTTAGTTGGTGGCGGTAAGGATTACGTGGATAAAGCACGCCATGAGGCTAAACCGAAAGTTTAC CGGTATCACCAACCGAATGATGAGTATGATGAATCTTGGTGGGATTTTGATGGGGCTATGGAAGATATGAACTTAATGTT TAGTATCGGTTTAGTTATCGCCAACAATGATGAGATGCCTAAGTGGACAAAAGAGGCGGACTTCCAAAGGCAATAA
Upstream 100 bases:
>100_bases AAACGGCCAAGCGTGAGCTTCGCCGTTTCCTTTTTTTATTGTTAATTTGAAATCTAAATACCTATATCTAATAAATTATG TCATTTAACAATCTACGATT
Downstream 100 bases:
>100_bases ATTAATGTGCCAATGTAGCAATATGCCAATATGCTAATCTGTCAATTAAGATACTATCACTTGTATTCTCACTGGACATT GACATATTGGCACATTGGCA
Product: hypothetical protein
Products: NA
Alternate protein names: Aminopeptidase; Peptidase; M28 Family Peptidase; Peptidase Family M; Glutamate Carboxypeptidase II; M20/M25/M40 Family Peptidase; M28 Family Aminopeptidase; M23B Family Peptidase; Aminopeptidase Family; Peptidase Family Protein; PDZ Domain-Containing Protein
Number of amino acids: Translated: 531; Mature: 531
Protein sequence:
>531_residues MNKNFISVFLLMLAMGVSVMAQSYEEDLAFFKERVKTLGSDEFGGRKPLTEYETKTIHYIADEFKKLGLQPANGDSYFQP VKEISTFTRPVKDKITVKCAKGSMDLKFSDDIVVWTNRGTEQVVIPTTDYVFCGFGINAPEYGWNDYANVDVKGKIVIAM VNDPGFYDTSLFRGKNMTYYGRWTYKFEEAQRQGAAGLLVLHNEAAASYGWKVCQASHVQTNIALCSETMNAEALGMKGW LSEEACKKMFALSGLNFDETIAAAKKPGFKSFTMKAKSKVILNVKMTVGESHNVAAVLPGTDLKDEYLVFTAHWDHFGIG TPIDGDSIYNGASDNASGVATLMLLAKKYQSLPVHPRRSIVFVAVTSEECGLLGSQYYCEHPLFPLSKTAINLNFDGTAP RERTHDVSLRAAGKTDTDALVIAMASAQGRTVKVITEDPAGGYFRSDHFNFVKKGVPTILVGGGKDYVDKARHEAKPKVY RYHQPNDEYDESWWDFDGAMEDMNLMFSIGLVIANNDEMPKWTKEADFQRQ
Sequences:
>Translated_531_residues MNKNFISVFLLMLAMGVSVMAQSYEEDLAFFKERVKTLGSDEFGGRKPLTEYETKTIHYIADEFKKLGLQPANGDSYFQP VKEISTFTRPVKDKITVKCAKGSMDLKFSDDIVVWTNRGTEQVVIPTTDYVFCGFGINAPEYGWNDYANVDVKGKIVIAM VNDPGFYDTSLFRGKNMTYYGRWTYKFEEAQRQGAAGLLVLHNEAAASYGWKVCQASHVQTNIALCSETMNAEALGMKGW LSEEACKKMFALSGLNFDETIAAAKKPGFKSFTMKAKSKVILNVKMTVGESHNVAAVLPGTDLKDEYLVFTAHWDHFGIG TPIDGDSIYNGASDNASGVATLMLLAKKYQSLPVHPRRSIVFVAVTSEECGLLGSQYYCEHPLFPLSKTAINLNFDGTAP RERTHDVSLRAAGKTDTDALVIAMASAQGRTVKVITEDPAGGYFRSDHFNFVKKGVPTILVGGGKDYVDKARHEAKPKVY RYHQPNDEYDESWWDFDGAMEDMNLMFSIGLVIANNDEMPKWTKEADFQRQ >Mature_531_residues MNKNFISVFLLMLAMGVSVMAQSYEEDLAFFKERVKTLGSDEFGGRKPLTEYETKTIHYIADEFKKLGLQPANGDSYFQP VKEISTFTRPVKDKITVKCAKGSMDLKFSDDIVVWTNRGTEQVVIPTTDYVFCGFGINAPEYGWNDYANVDVKGKIVIAM VNDPGFYDTSLFRGKNMTYYGRWTYKFEEAQRQGAAGLLVLHNEAAASYGWKVCQASHVQTNIALCSETMNAEALGMKGW LSEEACKKMFALSGLNFDETIAAAKKPGFKSFTMKAKSKVILNVKMTVGESHNVAAVLPGTDLKDEYLVFTAHWDHFGIG TPIDGDSIYNGASDNASGVATLMLLAKKYQSLPVHPRRSIVFVAVTSEECGLLGSQYYCEHPLFPLSKTAINLNFDGTAP RERTHDVSLRAAGKTDTDALVIAMASAQGRTVKVITEDPAGGYFRSDHFNFVKKGVPTILVGGGKDYVDKARHEAKPKVY RYHQPNDEYDESWWDFDGAMEDMNLMFSIGLVIANNDEMPKWTKEADFQRQ
Specific function: Unknown
COG id: COG2234
COG function: function code R; Predicted aminopeptidases
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 59153; Mature: 59153
Theoretical pI: Translated: 6.39; Mature: 6.39
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.3 %Cys (Translated Protein) 3.4 %Met (Translated Protein) 4.7 %Cys+Met (Translated Protein) 1.3 %Cys (Mature Protein) 3.4 %Met (Mature Protein) 4.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNKNFISVFLLMLAMGVSVMAQSYEEDLAFFKERVKTLGSDEFGGRKPLTEYETKTIHYI CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCHHCCHHHHHH ADEFKKLGLQPANGDSYFQPVKEISTFTRPVKDKITVKCAKGSMDLKFSDDIVVWTNRGT HHHHHHCCCCCCCCCHHHHHHHHHHHHHCCCCCCEEEEEECCCCCEEECCCEEEEECCCC EQVVIPTTDYVFCGFGINAPEYGWNDYANVDVKGKIVIAMVNDPGFYDTSLFRGKNMTYY CEEEEECCCEEEEECCCCCCCCCCCCCCCEEECCEEEEEEECCCCCCCCCEECCCCEEEE GRWTYKFEEAQRQGAAGLLVLHNEAAASYGWKVCQASHVQTNIALCSETMNAEALGMKGW EEEEEEEHHHHHCCCCEEEEEECCHHHHCCHHHHHHCCCHHHHHHHHHCCCCCCCCCCCC LSEEACKKMFALSGLNFDETIAAAKKPGFKSFTMKAKSKVILNVKMTVGESHNVAAVLPG CCHHHHHHHHHHCCCCHHHHHHHHCCCCCCCEEEECCCEEEEEEEEEECCCCCEEEEECC TDLKDEYLVFTAHWDHFGIGTPIDGDSIYNGASDNASGVATLMLLAKKYQSLPVHPRRSI CCCCCCEEEEEEECCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHCCCCCCCCCE VFVAVTSEECGLLGSQYYCEHPLFPLSKTAINLNFDGTAPRERTHDVSLRAAGKTDTDAL EEEEECCCCCCCCCCCCCCCCCCCCCCCEEEEEEECCCCCCCCCCCEEEEECCCCCCCEE VIAMASAQGRTVKVITEDPAGGYFRSDHFNFVKKGVPTILVGGGKDYVDKARHEAKPKVY EEEEECCCCCEEEEEEECCCCCCEECCCHHHHHCCCCEEEEECCHHHHHHHHHHCCCCEE RYHQPNDEYDESWWDFDGAMEDMNLMFSIGLVIANNDEMPKWTKEADFQRQ EECCCCCCCCCCCCCCCCCHHHCEEEEEEEEEEECCCCCCCCCCCCCCCCC >Mature Secondary Structure MNKNFISVFLLMLAMGVSVMAQSYEEDLAFFKERVKTLGSDEFGGRKPLTEYETKTIHYI CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCHHCCHHHHHH ADEFKKLGLQPANGDSYFQPVKEISTFTRPVKDKITVKCAKGSMDLKFSDDIVVWTNRGT HHHHHHCCCCCCCCCHHHHHHHHHHHHHCCCCCCEEEEEECCCCCEEECCCEEEEECCCC EQVVIPTTDYVFCGFGINAPEYGWNDYANVDVKGKIVIAMVNDPGFYDTSLFRGKNMTYY CEEEEECCCEEEEECCCCCCCCCCCCCCCEEECCEEEEEEECCCCCCCCCEECCCCEEEE GRWTYKFEEAQRQGAAGLLVLHNEAAASYGWKVCQASHVQTNIALCSETMNAEALGMKGW EEEEEEEHHHHHCCCCEEEEEECCHHHHCCHHHHHHCCCHHHHHHHHHCCCCCCCCCCCC LSEEACKKMFALSGLNFDETIAAAKKPGFKSFTMKAKSKVILNVKMTVGESHNVAAVLPG CCHHHHHHHHHHCCCCHHHHHHHHCCCCCCCEEEECCCEEEEEEEEEECCCCCEEEEECC TDLKDEYLVFTAHWDHFGIGTPIDGDSIYNGASDNASGVATLMLLAKKYQSLPVHPRRSI CCCCCCEEEEEEECCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHCCCCCCCCCE VFVAVTSEECGLLGSQYYCEHPLFPLSKTAINLNFDGTAPRERTHDVSLRAAGKTDTDAL EEEEECCCCCCCCCCCCCCCCCCCCCCCEEEEEEECCCCCCCCCCCEEEEECCCCCCCEE VIAMASAQGRTVKVITEDPAGGYFRSDHFNFVKKGVPTILVGGGKDYVDKARHEAKPKVY EEEEECCCCCEEEEEEECCCCCCEECCCHHHHHCCCCEEEEECCHHHHHHHHHHCCCCEE RYHQPNDEYDESWWDFDGAMEDMNLMFSIGLVIANNDEMPKWTKEADFQRQ EECCCCCCCCCCCCCCCCCHHHCEEEEEEEEEEECCCCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA