Definition Parabacteroides distasonis ATCC 8503 chromosome, complete genome.
Accession NC_009615
Length 4,811,379

Click here to switch to the map view.

The map label for this gene is 150009245

Identifier: 150009245

GI number: 150009245

Start: 3126580

End: 3128070

Strand: Reverse

Name: 150009245

Synonym: BDI_2647

Alternate gene names: NA

Gene position: 3128070-3126580 (Counterclockwise)

Preceding gene: 150009248

Following gene: 150009244

Centisome position: 65.01

GC content: 44.6

Gene sequence:

>1491_bases
ATGTCTAACATTTCTAGAAGATCTTTTCTTCAAAAAGGTACGGCTGCCGCAGCAGCTTTGACTATTGTTCCGAGTGCGGT
CCTAGGTAAAACCCATGGTCATATCGCTCCAACTGATAAATTGAATATTGCCGGTGTTGGTATCGGAGGTATGGGTAACG
CTAACTTAAAGAACATGGAGACTACCGAGAATATCGTAGCTCTTTGTGACATCGACTGGAAGTACTCAAAACCTGTATTC
GACCGTCATCCTCAAGCTAAAAAATACTGGGACTATCGTAAGATGTATGATGAGATGGGTAAATCTATTGACGCTGTGTT
GGTAGCTACCGCTGACCATACTCATGCGATGATCACAGCTGACGCTATGACGCTTGGCAAACACGTATACACTCAGAAAC
CGTTGACTCACTCTGTTTATGAGTCCCGTTTGCTTACGAACTTGGCTAAGAAGTATGACGTAGCTACTCAGATGGGTAAC
CAAGGTTCTTCATTGGCTGAAGGTGTAGATTTGATCTGTGAATGGATTTGGAATGGTGAGATCGGTGAGGTTACTAAAGT
AGAATGCGCTACCAACCGTCCTATCTGGCCGCAAGGTTTGAACGCTCCTGAGAAAGTTGATAAGATTCCTTCTACATTGA
ATTGGGATTTGTTTACGGGTCCTGCTAAATTGAGACCGTTTAATAAGACATATCATCCTTGGAACTGGCGCGGATGGTGG
GATTATGGTACAGGTGCGTTGGGTGATATGGCTTGCCACATCTTACATCCGGTATTCAAAGGCTTGAATTTAGGCTATCC
GACAAGAGTTCAAGGTTCTTCTACATTGTTATTACAAGACTGTGCTCCTAACGCTCAGCATGTTAAGTTGGTATTCCCGG
CTCGTGATAATATGCCAAAGGTAGCTATGCCGGAGGTTGAAGTTCACTGGTATGATGGTGGTATGATGCCGGATCGTCCA
GAAGGATTCCCTCAAGGTAAGGAATTGATGGGTGAAGGTGGTGGATTGTGTATCTTCCATGGTACGAAAGATACATTGAT
CTGTGGTTGCTACGGTGTTAACCCATGGTTGTTATCTGGTCGTAAACCGAACGTTCCTCAAACATTGCGCCGCGTGAAAG
ACGCTATGAAGGGTGGTCACGAACAAGACTGGATTCGTGCTTGTAAGGAAAGCGCAGGCAGCCGTGTTCAGACGAAGTCT
AACTTCTTGGAGGCTGGTCCGTTCAATGAAATGGTTGTAATGGGTGTATTGGCTGTTCGTTTGCAAAGATTGAATAAAGA
ATTGTTGTGGGATGGCCCTAACATGAGATTTACGAATATCGATCCGAATGAGACAATCAAGATCATCAAGAAAGATACAT
TCGAGGTTATCGATGGTGACCCGAAATTCAAGACAGAGTGGACGGATCCAATTAATGCTCAAGAATTTGCCGCAGGCTTG
ATCAAGCACAACTACCGTGAAGGCTGGAAGTTGGTAGATATGCCGAGATAA

Upstream 100 bases:

>100_bases
AATACAGCATTGGCTATATTTGCGACAATTTGTTGCCTGTAAAGGTGTAAAGACACATGAAATATCATTGTTAAGTGCTA
ATCTATAAAAAATTATTACT

Downstream 100 bases:

>100_bases
TAGTTTTAACTCAATAAATAAAATGAAAAAGTCAGTATTATTAGCAAGTGCTGCTATCATGATGTGTTATTTCACATCTT
GTGGTGGTGGAAAGAAAACA

Product: putative dehydrogenase

Products: NA

Alternate protein names: Oxidoreductase Domain-Containing Protein; NADH-Dependent Dehydrogenase; Oxidoreductase; Dehydrogenase; NADH-Dependent Dyhydrogenase; Dehydrogenase-Like Protein; NADH-Dependent Dehydrogenase-Like Protein; NADH-Dependent Dihydrogenase; NADH-Dependent Deydrogenase; Hydrogenase; Dehydrogenase And Relate Protein; Dehydrogenases Related Protein

Number of amino acids: Translated: 496; Mature: 495

Protein sequence:

>496_residues
MSNISRRSFLQKGTAAAAALTIVPSAVLGKTHGHIAPTDKLNIAGVGIGGMGNANLKNMETTENIVALCDIDWKYSKPVF
DRHPQAKKYWDYRKMYDEMGKSIDAVLVATADHTHAMITADAMTLGKHVYTQKPLTHSVYESRLLTNLAKKYDVATQMGN
QGSSLAEGVDLICEWIWNGEIGEVTKVECATNRPIWPQGLNAPEKVDKIPSTLNWDLFTGPAKLRPFNKTYHPWNWRGWW
DYGTGALGDMACHILHPVFKGLNLGYPTRVQGSSTLLLQDCAPNAQHVKLVFPARDNMPKVAMPEVEVHWYDGGMMPDRP
EGFPQGKELMGEGGGLCIFHGTKDTLICGCYGVNPWLLSGRKPNVPQTLRRVKDAMKGGHEQDWIRACKESAGSRVQTKS
NFLEAGPFNEMVVMGVLAVRLQRLNKELLWDGPNMRFTNIDPNETIKIIKKDTFEVIDGDPKFKTEWTDPINAQEFAAGL
IKHNYREGWKLVDMPR

Sequences:

>Translated_496_residues
MSNISRRSFLQKGTAAAAALTIVPSAVLGKTHGHIAPTDKLNIAGVGIGGMGNANLKNMETTENIVALCDIDWKYSKPVF
DRHPQAKKYWDYRKMYDEMGKSIDAVLVATADHTHAMITADAMTLGKHVYTQKPLTHSVYESRLLTNLAKKYDVATQMGN
QGSSLAEGVDLICEWIWNGEIGEVTKVECATNRPIWPQGLNAPEKVDKIPSTLNWDLFTGPAKLRPFNKTYHPWNWRGWW
DYGTGALGDMACHILHPVFKGLNLGYPTRVQGSSTLLLQDCAPNAQHVKLVFPARDNMPKVAMPEVEVHWYDGGMMPDRP
EGFPQGKELMGEGGGLCIFHGTKDTLICGCYGVNPWLLSGRKPNVPQTLRRVKDAMKGGHEQDWIRACKESAGSRVQTKS
NFLEAGPFNEMVVMGVLAVRLQRLNKELLWDGPNMRFTNIDPNETIKIIKKDTFEVIDGDPKFKTEWTDPINAQEFAAGL
IKHNYREGWKLVDMPR
>Mature_495_residues
SNISRRSFLQKGTAAAAALTIVPSAVLGKTHGHIAPTDKLNIAGVGIGGMGNANLKNMETTENIVALCDIDWKYSKPVFD
RHPQAKKYWDYRKMYDEMGKSIDAVLVATADHTHAMITADAMTLGKHVYTQKPLTHSVYESRLLTNLAKKYDVATQMGNQ
GSSLAEGVDLICEWIWNGEIGEVTKVECATNRPIWPQGLNAPEKVDKIPSTLNWDLFTGPAKLRPFNKTYHPWNWRGWWD
YGTGALGDMACHILHPVFKGLNLGYPTRVQGSSTLLLQDCAPNAQHVKLVFPARDNMPKVAMPEVEVHWYDGGMMPDRPE
GFPQGKELMGEGGGLCIFHGTKDTLICGCYGVNPWLLSGRKPNVPQTLRRVKDAMKGGHEQDWIRACKESAGSRVQTKSN
FLEAGPFNEMVVMGVLAVRLQRLNKELLWDGPNMRFTNIDPNETIKIIKKDTFEVIDGDPKFKTEWTDPINAQEFAAGLI
KHNYREGWKLVDMPR

Specific function: Unknown

COG id: COG0673

COG function: function code R; Predicted dehydrogenases and related proteins

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 55402; Mature: 55271

Theoretical pI: Translated: 8.32; Mature: 8.32

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.8 %Cys     (Translated Protein)
3.8 %Met     (Translated Protein)
5.6 %Cys+Met (Translated Protein)
1.8 %Cys     (Mature Protein)
3.6 %Met     (Mature Protein)
5.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSNISRRSFLQKGTAAAAALTIVPSAVLGKTHGHIAPTDKLNIAGVGIGGMGNANLKNME
CCCCHHHHHHHHCHHHHHHHHHHHHHHHCCCCCCCCCCCCEEEEEEEECCCCCCCCCCCC
TTENIVALCDIDWKYSKPVFDRHPQAKKYWDYRKMYDEMGKSIDAVLVATADHTHAMITA
CCCCEEEEEECCCCCCCCHHCCCCCHHHHHHHHHHHHHHCCCEEEEEEEECCCCEEEEEE
DAMTLGKHVYTQKPLTHSVYESRLLTNLAKKYDVATQMGNQGSSLAEGVDLICEWIWNGE
HHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHCCCC
IGEVTKVECATNRPIWPQGLNAPEKVDKIPSTLNWDLFTGPAKLRPFNKTYHPWNWRGWW
CCCEEEEEECCCCCCCCCCCCCHHHHHHCCCCCCCCEEECCHHCCCCCCCCCCCCCCEEE
DYGTGALGDMACHILHPVFKGLNLGYPTRVQGSSTLLLQDCAPNAQHVKLVFPARDNMPK
CCCCCCHHHHHHHHHHHHHHHCCCCCCCEECCCCEEEEECCCCCCCEEEEEECCCCCCCC
VAMPEVEVHWYDGGMMPDRPEGFPQGKELMGEGGGLCIFHGTKDTLICGCYGVNPWLLSG
CCCCCEEEEEECCCCCCCCCCCCCCCHHHHCCCCCEEEEECCCCEEEEEEECCCCEEECC
RKPNVPQTLRRVKDAMKGGHEQDWIRACKESAGSRVQTKSNFLEAGPFNEMVVMGVLAVR
CCCCHHHHHHHHHHHHCCCCHHHHHHHHHHHCCCEEEHHHCCCCCCCCHHHHHHHHHHHH
LQRLNKELLWDGPNMRFTNIDPNETIKIIKKDTFEVIDGDPKFKTEWTDPINAQEFAAGL
HHHHCHHHEECCCCCEEECCCCCCEEEEEECCCEEEECCCCCCCCCCCCCCCHHHHHHHH
IKHNYREGWKLVDMPR
HHHHHHCCCEEECCCC
>Mature Secondary Structure 
SNISRRSFLQKGTAAAAALTIVPSAVLGKTHGHIAPTDKLNIAGVGIGGMGNANLKNME
CCCHHHHHHHHCHHHHHHHHHHHHHHHCCCCCCCCCCCCEEEEEEEECCCCCCCCCCCC
TTENIVALCDIDWKYSKPVFDRHPQAKKYWDYRKMYDEMGKSIDAVLVATADHTHAMITA
CCCCEEEEEECCCCCCCCHHCCCCCHHHHHHHHHHHHHHCCCEEEEEEEECCCCEEEEEE
DAMTLGKHVYTQKPLTHSVYESRLLTNLAKKYDVATQMGNQGSSLAEGVDLICEWIWNGE
HHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHCCCC
IGEVTKVECATNRPIWPQGLNAPEKVDKIPSTLNWDLFTGPAKLRPFNKTYHPWNWRGWW
CCCEEEEEECCCCCCCCCCCCCHHHHHHCCCCCCCCEEECCHHCCCCCCCCCCCCCCEEE
DYGTGALGDMACHILHPVFKGLNLGYPTRVQGSSTLLLQDCAPNAQHVKLVFPARDNMPK
CCCCCCHHHHHHHHHHHHHHHCCCCCCCEECCCCEEEEECCCCCCCEEEEEECCCCCCCC
VAMPEVEVHWYDGGMMPDRPEGFPQGKELMGEGGGLCIFHGTKDTLICGCYGVNPWLLSG
CCCCCEEEEEECCCCCCCCCCCCCCCHHHHCCCCCEEEEECCCCEEEEEEECCCCEEECC
RKPNVPQTLRRVKDAMKGGHEQDWIRACKESAGSRVQTKSNFLEAGPFNEMVVMGVLAVR
CCCCHHHHHHHHHHHHCCCCHHHHHHHHHHHCCCEEEHHHCCCCCCCCHHHHHHHHHHHH
LQRLNKELLWDGPNMRFTNIDPNETIKIIKKDTFEVIDGDPKFKTEWTDPINAQEFAAGL
HHHHCHHHEECCCCCEEECCCCCCEEEEEECCCEEEECCCCCCCCCCCCCCCHHHHHHHH
IKHNYREGWKLVDMPR
HHHHHHCCCEEECCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA