| Definition | Parabacteroides distasonis ATCC 8503 chromosome, complete genome. |
|---|---|
| Accession | NC_009615 |
| Length | 4,811,379 |
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The map label for this gene is 150009245
Identifier: 150009245
GI number: 150009245
Start: 3126580
End: 3128070
Strand: Reverse
Name: 150009245
Synonym: BDI_2647
Alternate gene names: NA
Gene position: 3128070-3126580 (Counterclockwise)
Preceding gene: 150009248
Following gene: 150009244
Centisome position: 65.01
GC content: 44.6
Gene sequence:
>1491_bases ATGTCTAACATTTCTAGAAGATCTTTTCTTCAAAAAGGTACGGCTGCCGCAGCAGCTTTGACTATTGTTCCGAGTGCGGT CCTAGGTAAAACCCATGGTCATATCGCTCCAACTGATAAATTGAATATTGCCGGTGTTGGTATCGGAGGTATGGGTAACG CTAACTTAAAGAACATGGAGACTACCGAGAATATCGTAGCTCTTTGTGACATCGACTGGAAGTACTCAAAACCTGTATTC GACCGTCATCCTCAAGCTAAAAAATACTGGGACTATCGTAAGATGTATGATGAGATGGGTAAATCTATTGACGCTGTGTT GGTAGCTACCGCTGACCATACTCATGCGATGATCACAGCTGACGCTATGACGCTTGGCAAACACGTATACACTCAGAAAC CGTTGACTCACTCTGTTTATGAGTCCCGTTTGCTTACGAACTTGGCTAAGAAGTATGACGTAGCTACTCAGATGGGTAAC CAAGGTTCTTCATTGGCTGAAGGTGTAGATTTGATCTGTGAATGGATTTGGAATGGTGAGATCGGTGAGGTTACTAAAGT AGAATGCGCTACCAACCGTCCTATCTGGCCGCAAGGTTTGAACGCTCCTGAGAAAGTTGATAAGATTCCTTCTACATTGA ATTGGGATTTGTTTACGGGTCCTGCTAAATTGAGACCGTTTAATAAGACATATCATCCTTGGAACTGGCGCGGATGGTGG GATTATGGTACAGGTGCGTTGGGTGATATGGCTTGCCACATCTTACATCCGGTATTCAAAGGCTTGAATTTAGGCTATCC GACAAGAGTTCAAGGTTCTTCTACATTGTTATTACAAGACTGTGCTCCTAACGCTCAGCATGTTAAGTTGGTATTCCCGG CTCGTGATAATATGCCAAAGGTAGCTATGCCGGAGGTTGAAGTTCACTGGTATGATGGTGGTATGATGCCGGATCGTCCA GAAGGATTCCCTCAAGGTAAGGAATTGATGGGTGAAGGTGGTGGATTGTGTATCTTCCATGGTACGAAAGATACATTGAT CTGTGGTTGCTACGGTGTTAACCCATGGTTGTTATCTGGTCGTAAACCGAACGTTCCTCAAACATTGCGCCGCGTGAAAG ACGCTATGAAGGGTGGTCACGAACAAGACTGGATTCGTGCTTGTAAGGAAAGCGCAGGCAGCCGTGTTCAGACGAAGTCT AACTTCTTGGAGGCTGGTCCGTTCAATGAAATGGTTGTAATGGGTGTATTGGCTGTTCGTTTGCAAAGATTGAATAAAGA ATTGTTGTGGGATGGCCCTAACATGAGATTTACGAATATCGATCCGAATGAGACAATCAAGATCATCAAGAAAGATACAT TCGAGGTTATCGATGGTGACCCGAAATTCAAGACAGAGTGGACGGATCCAATTAATGCTCAAGAATTTGCCGCAGGCTTG ATCAAGCACAACTACCGTGAAGGCTGGAAGTTGGTAGATATGCCGAGATAA
Upstream 100 bases:
>100_bases AATACAGCATTGGCTATATTTGCGACAATTTGTTGCCTGTAAAGGTGTAAAGACACATGAAATATCATTGTTAAGTGCTA ATCTATAAAAAATTATTACT
Downstream 100 bases:
>100_bases TAGTTTTAACTCAATAAATAAAATGAAAAAGTCAGTATTATTAGCAAGTGCTGCTATCATGATGTGTTATTTCACATCTT GTGGTGGTGGAAAGAAAACA
Product: putative dehydrogenase
Products: NA
Alternate protein names: Oxidoreductase Domain-Containing Protein; NADH-Dependent Dehydrogenase; Oxidoreductase; Dehydrogenase; NADH-Dependent Dyhydrogenase; Dehydrogenase-Like Protein; NADH-Dependent Dehydrogenase-Like Protein; NADH-Dependent Dihydrogenase; NADH-Dependent Deydrogenase; Hydrogenase; Dehydrogenase And Relate Protein; Dehydrogenases Related Protein
Number of amino acids: Translated: 496; Mature: 495
Protein sequence:
>496_residues MSNISRRSFLQKGTAAAAALTIVPSAVLGKTHGHIAPTDKLNIAGVGIGGMGNANLKNMETTENIVALCDIDWKYSKPVF DRHPQAKKYWDYRKMYDEMGKSIDAVLVATADHTHAMITADAMTLGKHVYTQKPLTHSVYESRLLTNLAKKYDVATQMGN QGSSLAEGVDLICEWIWNGEIGEVTKVECATNRPIWPQGLNAPEKVDKIPSTLNWDLFTGPAKLRPFNKTYHPWNWRGWW DYGTGALGDMACHILHPVFKGLNLGYPTRVQGSSTLLLQDCAPNAQHVKLVFPARDNMPKVAMPEVEVHWYDGGMMPDRP EGFPQGKELMGEGGGLCIFHGTKDTLICGCYGVNPWLLSGRKPNVPQTLRRVKDAMKGGHEQDWIRACKESAGSRVQTKS NFLEAGPFNEMVVMGVLAVRLQRLNKELLWDGPNMRFTNIDPNETIKIIKKDTFEVIDGDPKFKTEWTDPINAQEFAAGL IKHNYREGWKLVDMPR
Sequences:
>Translated_496_residues MSNISRRSFLQKGTAAAAALTIVPSAVLGKTHGHIAPTDKLNIAGVGIGGMGNANLKNMETTENIVALCDIDWKYSKPVF DRHPQAKKYWDYRKMYDEMGKSIDAVLVATADHTHAMITADAMTLGKHVYTQKPLTHSVYESRLLTNLAKKYDVATQMGN QGSSLAEGVDLICEWIWNGEIGEVTKVECATNRPIWPQGLNAPEKVDKIPSTLNWDLFTGPAKLRPFNKTYHPWNWRGWW DYGTGALGDMACHILHPVFKGLNLGYPTRVQGSSTLLLQDCAPNAQHVKLVFPARDNMPKVAMPEVEVHWYDGGMMPDRP EGFPQGKELMGEGGGLCIFHGTKDTLICGCYGVNPWLLSGRKPNVPQTLRRVKDAMKGGHEQDWIRACKESAGSRVQTKS NFLEAGPFNEMVVMGVLAVRLQRLNKELLWDGPNMRFTNIDPNETIKIIKKDTFEVIDGDPKFKTEWTDPINAQEFAAGL IKHNYREGWKLVDMPR >Mature_495_residues SNISRRSFLQKGTAAAAALTIVPSAVLGKTHGHIAPTDKLNIAGVGIGGMGNANLKNMETTENIVALCDIDWKYSKPVFD RHPQAKKYWDYRKMYDEMGKSIDAVLVATADHTHAMITADAMTLGKHVYTQKPLTHSVYESRLLTNLAKKYDVATQMGNQ GSSLAEGVDLICEWIWNGEIGEVTKVECATNRPIWPQGLNAPEKVDKIPSTLNWDLFTGPAKLRPFNKTYHPWNWRGWWD YGTGALGDMACHILHPVFKGLNLGYPTRVQGSSTLLLQDCAPNAQHVKLVFPARDNMPKVAMPEVEVHWYDGGMMPDRPE GFPQGKELMGEGGGLCIFHGTKDTLICGCYGVNPWLLSGRKPNVPQTLRRVKDAMKGGHEQDWIRACKESAGSRVQTKSN FLEAGPFNEMVVMGVLAVRLQRLNKELLWDGPNMRFTNIDPNETIKIIKKDTFEVIDGDPKFKTEWTDPINAQEFAAGLI KHNYREGWKLVDMPR
Specific function: Unknown
COG id: COG0673
COG function: function code R; Predicted dehydrogenases and related proteins
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 55402; Mature: 55271
Theoretical pI: Translated: 8.32; Mature: 8.32
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.8 %Cys (Translated Protein) 3.8 %Met (Translated Protein) 5.6 %Cys+Met (Translated Protein) 1.8 %Cys (Mature Protein) 3.6 %Met (Mature Protein) 5.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSNISRRSFLQKGTAAAAALTIVPSAVLGKTHGHIAPTDKLNIAGVGIGGMGNANLKNME CCCCHHHHHHHHCHHHHHHHHHHHHHHHCCCCCCCCCCCCEEEEEEEECCCCCCCCCCCC TTENIVALCDIDWKYSKPVFDRHPQAKKYWDYRKMYDEMGKSIDAVLVATADHTHAMITA CCCCEEEEEECCCCCCCCHHCCCCCHHHHHHHHHHHHHHCCCEEEEEEEECCCCEEEEEE DAMTLGKHVYTQKPLTHSVYESRLLTNLAKKYDVATQMGNQGSSLAEGVDLICEWIWNGE HHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHCCCC IGEVTKVECATNRPIWPQGLNAPEKVDKIPSTLNWDLFTGPAKLRPFNKTYHPWNWRGWW CCCEEEEEECCCCCCCCCCCCCHHHHHHCCCCCCCCEEECCHHCCCCCCCCCCCCCCEEE DYGTGALGDMACHILHPVFKGLNLGYPTRVQGSSTLLLQDCAPNAQHVKLVFPARDNMPK CCCCCCHHHHHHHHHHHHHHHCCCCCCCEECCCCEEEEECCCCCCCEEEEEECCCCCCCC VAMPEVEVHWYDGGMMPDRPEGFPQGKELMGEGGGLCIFHGTKDTLICGCYGVNPWLLSG CCCCCEEEEEECCCCCCCCCCCCCCCHHHHCCCCCEEEEECCCCEEEEEEECCCCEEECC RKPNVPQTLRRVKDAMKGGHEQDWIRACKESAGSRVQTKSNFLEAGPFNEMVVMGVLAVR CCCCHHHHHHHHHHHHCCCCHHHHHHHHHHHCCCEEEHHHCCCCCCCCHHHHHHHHHHHH LQRLNKELLWDGPNMRFTNIDPNETIKIIKKDTFEVIDGDPKFKTEWTDPINAQEFAAGL HHHHCHHHEECCCCCEEECCCCCCEEEEEECCCEEEECCCCCCCCCCCCCCCHHHHHHHH IKHNYREGWKLVDMPR HHHHHHCCCEEECCCC >Mature Secondary Structure SNISRRSFLQKGTAAAAALTIVPSAVLGKTHGHIAPTDKLNIAGVGIGGMGNANLKNME CCCHHHHHHHHCHHHHHHHHHHHHHHHCCCCCCCCCCCCEEEEEEEECCCCCCCCCCCC TTENIVALCDIDWKYSKPVFDRHPQAKKYWDYRKMYDEMGKSIDAVLVATADHTHAMITA CCCCEEEEEECCCCCCCCHHCCCCCHHHHHHHHHHHHHHCCCEEEEEEEECCCCEEEEEE DAMTLGKHVYTQKPLTHSVYESRLLTNLAKKYDVATQMGNQGSSLAEGVDLICEWIWNGE HHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHCCCC IGEVTKVECATNRPIWPQGLNAPEKVDKIPSTLNWDLFTGPAKLRPFNKTYHPWNWRGWW CCCEEEEEECCCCCCCCCCCCCHHHHHHCCCCCCCCEEECCHHCCCCCCCCCCCCCCEEE DYGTGALGDMACHILHPVFKGLNLGYPTRVQGSSTLLLQDCAPNAQHVKLVFPARDNMPK CCCCCCHHHHHHHHHHHHHHHCCCCCCCEECCCCEEEEECCCCCCCEEEEEECCCCCCCC VAMPEVEVHWYDGGMMPDRPEGFPQGKELMGEGGGLCIFHGTKDTLICGCYGVNPWLLSG CCCCCEEEEEECCCCCCCCCCCCCCCHHHHCCCCCEEEEECCCCEEEEEEECCCCEEECC RKPNVPQTLRRVKDAMKGGHEQDWIRACKESAGSRVQTKSNFLEAGPFNEMVVMGVLAVR CCCCHHHHHHHHHHHHCCCCHHHHHHHHHHHCCCEEEHHHCCCCCCCCHHHHHHHHHHHH LQRLNKELLWDGPNMRFTNIDPNETIKIIKKDTFEVIDGDPKFKTEWTDPINAQEFAAGL HHHHCHHHEECCCCCEEECCCCCCEEEEEECCCEEEECCCCCCCCCCCCCCCHHHHHHHH IKHNYREGWKLVDMPR HHHHHHCCCEEECCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA