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The map label for this gene is yrbE [H]

Identifier: 150009242

GI number: 150009242

Start: 3123415

End: 3125073

Strand: Reverse

Name: yrbE [H]

Synonym: BDI_2644

Alternate gene names: 150009242

Gene position: 3125073-3123415 (Counterclockwise)

Preceding gene: 150009243

Following gene: 150009241

Centisome position: 64.95

GC content: 46.05

Gene sequence:

>1659_bases
ATGGCAACAGAAGATGCAAAGAATACTCCTTCTCAGGAGCAAATGCCCGATAAAGGACGTCGGGACACATTGAAGACATT
GGCTACAGTGCCTATCTTAGGTGCTTTGGCATATGGCGTTTACCAAAAAAGGAAAGACGCTTTAAGAGGCCGTAACATAT
CAGATGTATTTCAGGTAAGTAACAGACAGGCCTCCTATTTAGAGCCGCAAGGCGATGGCAAGAAGATCCGTATCGGTTTG
ATAGGCTTCGGTATTCGTGGAAAGCAATTGATGCGTGCCGCAGGTTTCGCTGAGCCTTCTTGGATCGATAAGATGAAAGA
GGCTAATAAGTTGAATAAGAAAGACACGCGTTATCAACAATATATGGAGCAAGATGATCTGAATATCGAGATAACCGCTG
TTTGTGATATATTTGATGTATATGGTGAAGCCGCAGTGTTGACCGGCTCCAATATCCATCGTGAGGGTAGCGACGGTAAG
TTCGGGCCTGCTCCGAAGCGTTACCGGACTTATCAAGAGCTGGTAACGGCTCCGGATGTGGATGCCGTTATTATCGCTGG
TCCGGACCACTGGCATAGCACGATCGCTATGGCTGCGGCACGTGCCGGAAAGCATGTATATTGCGAGAAACCGTTATCAT
GGACGGTTCCTGAGACGTATATGGTTCGCCAAGTGATCAAAGAGACCGGCGTTGTATTTCAGTTAGGTCACCAAGGACGT
CAGACCGATTGCTATCAGAAGGCCGAGGAGATTATCGGTAACGGATTATTAGGCCCTGTTAACTTGATCGAGGTTTGTAC
GAACCGTAACTCTCCAAATGGTGCTTGGGTATATGATATTATCGAAGGCTCTAATCCGAATACGATTGATTGGAAGCAGT
TCGAGGGTGATCCTGAGCGTATTAAGGAATATATGGATTATATGACATCCAATAAGCTTGAAAGATATATCGGTCCGGAC
GAGCGTAGCAAGTTTAGTCTGGAACGTTTCTTCCGCTGGCGTTGCTGGTGGGATTATAGTACAGGTCTTTCCGGTGACTT
GTTGACACATGAGTACGACGCTGTCAACCAGATCATGCATGTAGGTATACCTCATTCTGCTACTTCATCCGGTGGTGTTT
ATTTCTTCAAGGACGGACGTACGGTACCTGATGTATTGCAGACTACTTTCGAGTGGCCGGATCGTGACTTGACGATGTTG
TATAGCGCTACATTGGCAAGTAGCCGTAACCGTGGCAAGGTGTTCATGGGGCATGATGCTTCTATGGAGGTTTCCAATAT
CTTGGCTATTACGGTTGACCAAGATTCCACTCGTTATGCGGATAAGATCAAGGAAGGTATTATTCCTACAGATACCCCGT
TCTATACCTATGTACCGGGACAAAATAGCTCGGATTCCGTTACATCTCCTACGGAGTTGTATTTTGCTAAACGTGGTTTG
CTGTATACGTATGTAAATGGTAAACGTTATGATACGACTCACTTGCATATCCGTGAGTGGCTAGAATGTATCCGTCAAGG
CAAGACTCCTAGTTGTAATATCGACGCCGCTTTTCAAGAGGCTATGACCGCTCATATGGGTACTCGCGCTTATCTGGAAG
GACGTACGATGTATTGGGATAAGGACAAAGAAGAGATCGTAAGAGGTGAACTTGCGTAA

Upstream 100 bases:

>100_bases
GCTTGATGTGCGTATTCCCTACATCACAAATCATAGGATTCGATCGTGTGTTAGGACGTGTGTGTCCGATATTGCATAAA
CTTAAATTTATTTGATACCC

Downstream 100 bases:

>100_bases
GTATCTAAAAAGACGATAAATAACTTTCCCAAGAAGCGAACTTCATAAATGGATGGAGTTCGCTTCTTTTATTTGTGCAT
GTATAAAATTTCTTCTCTTT

Product: putative oxidoreductase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 552; Mature: 551

Protein sequence:

>552_residues
MATEDAKNTPSQEQMPDKGRRDTLKTLATVPILGALAYGVYQKRKDALRGRNISDVFQVSNRQASYLEPQGDGKKIRIGL
IGFGIRGKQLMRAAGFAEPSWIDKMKEANKLNKKDTRYQQYMEQDDLNIEITAVCDIFDVYGEAAVLTGSNIHREGSDGK
FGPAPKRYRTYQELVTAPDVDAVIIAGPDHWHSTIAMAAARAGKHVYCEKPLSWTVPETYMVRQVIKETGVVFQLGHQGR
QTDCYQKAEEIIGNGLLGPVNLIEVCTNRNSPNGAWVYDIIEGSNPNTIDWKQFEGDPERIKEYMDYMTSNKLERYIGPD
ERSKFSLERFFRWRCWWDYSTGLSGDLLTHEYDAVNQIMHVGIPHSATSSGGVYFFKDGRTVPDVLQTTFEWPDRDLTML
YSATLASSRNRGKVFMGHDASMEVSNILAITVDQDSTRYADKIKEGIIPTDTPFYTYVPGQNSSDSVTSPTELYFAKRGL
LYTYVNGKRYDTTHLHIREWLECIRQGKTPSCNIDAAFQEAMTAHMGTRAYLEGRTMYWDKDKEEIVRGELA

Sequences:

>Translated_552_residues
MATEDAKNTPSQEQMPDKGRRDTLKTLATVPILGALAYGVYQKRKDALRGRNISDVFQVSNRQASYLEPQGDGKKIRIGL
IGFGIRGKQLMRAAGFAEPSWIDKMKEANKLNKKDTRYQQYMEQDDLNIEITAVCDIFDVYGEAAVLTGSNIHREGSDGK
FGPAPKRYRTYQELVTAPDVDAVIIAGPDHWHSTIAMAAARAGKHVYCEKPLSWTVPETYMVRQVIKETGVVFQLGHQGR
QTDCYQKAEEIIGNGLLGPVNLIEVCTNRNSPNGAWVYDIIEGSNPNTIDWKQFEGDPERIKEYMDYMTSNKLERYIGPD
ERSKFSLERFFRWRCWWDYSTGLSGDLLTHEYDAVNQIMHVGIPHSATSSGGVYFFKDGRTVPDVLQTTFEWPDRDLTML
YSATLASSRNRGKVFMGHDASMEVSNILAITVDQDSTRYADKIKEGIIPTDTPFYTYVPGQNSSDSVTSPTELYFAKRGL
LYTYVNGKRYDTTHLHIREWLECIRQGKTPSCNIDAAFQEAMTAHMGTRAYLEGRTMYWDKDKEEIVRGELA
>Mature_551_residues
ATEDAKNTPSQEQMPDKGRRDTLKTLATVPILGALAYGVYQKRKDALRGRNISDVFQVSNRQASYLEPQGDGKKIRIGLI
GFGIRGKQLMRAAGFAEPSWIDKMKEANKLNKKDTRYQQYMEQDDLNIEITAVCDIFDVYGEAAVLTGSNIHREGSDGKF
GPAPKRYRTYQELVTAPDVDAVIIAGPDHWHSTIAMAAARAGKHVYCEKPLSWTVPETYMVRQVIKETGVVFQLGHQGRQ
TDCYQKAEEIIGNGLLGPVNLIEVCTNRNSPNGAWVYDIIEGSNPNTIDWKQFEGDPERIKEYMDYMTSNKLERYIGPDE
RSKFSLERFFRWRCWWDYSTGLSGDLLTHEYDAVNQIMHVGIPHSATSSGGVYFFKDGRTVPDVLQTTFEWPDRDLTMLY
SATLASSRNRGKVFMGHDASMEVSNILAITVDQDSTRYADKIKEGIIPTDTPFYTYVPGQNSSDSVTSPTELYFAKRGLL
YTYVNGKRYDTTHLHIREWLECIRQGKTPSCNIDAAFQEAMTAHMGTRAYLEGRTMYWDKDKEEIVRGELA

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the gfo/idh/mocA family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR016040
- InterPro:   IPR000683
- InterPro:   IPR004104 [H]

Pfam domain/function: PF01408 GFO_IDH_MocA; PF02894 GFO_IDH_MocA_C [H]

EC number: 1.-.-.- [C]

Molecular weight: Translated: 62561; Mature: 62430

Theoretical pI: Translated: 6.39; Mature: 6.39

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.3 %Cys     (Translated Protein)
2.9 %Met     (Translated Protein)
4.2 %Cys+Met (Translated Protein)
1.3 %Cys     (Mature Protein)
2.7 %Met     (Mature Protein)
4.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MATEDAKNTPSQEQMPDKGRRDTLKTLATVPILGALAYGVYQKRKDALRGRNISDVFQVS
CCCCCCCCCCCHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHC
NRQASYLEPQGDGKKIRIGLIGFGIRGKQLMRAAGFAEPSWIDKMKEANKLNKKDTRYQQ
CCCCCCCCCCCCCCEEEEEEEEECCCHHHHHHHHCCCCHHHHHHHHHHHHCCCHHHHHHH
YMEQDDLNIEITAVCDIFDVYGEAAVLTGSNIHREGSDGKFGPAPKRYRTYQELVTAPDV
HHHHCCCCEEEEEEHHHHHHHCCEEEEECCCCCCCCCCCCCCCCCHHHHHHHHHHCCCCC
DAVIIAGPDHWHSTIAMAAARAGKHVYCEKPLSWTVPETYMVRQVIKETGVVFQLGHQGR
CEEEEECCCHHHHHHHHHHHHCCCEEEECCCCCCCCCHHHHHHHHHHHCCCEEEECCCCC
QTDCYQKAEEIIGNGLLGPVNLIEVCTNRNSPNGAWVYDIIEGSNPNTIDWKQFEGDPER
CCHHHHHHHHHHCCCCCCHHHHHHHHHCCCCCCCCEEEEEEECCCCCCCCHHHCCCCHHH
IKEYMDYMTSNKLERYIGPDERSKFSLERFFRWRCWWDYSTGLSGDLLTHEYDAVNQIMH
HHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHEEEEEEECCCCCCCCCHHHHHHHHHHHHH
VGIPHSATSSGGVYFFKDGRTVPDVLQTTFEWPDRDLTMLYSATLASSRNRGKVFMGHDA
CCCCCCCCCCCCEEEEECCCCHHHHHHHHHCCCCCCHHHHHHHHHHCCCCCCCEEECCCC
SMEVSNILAITVDQDSTRYADKIKEGIIPTDTPFYTYVPGQNSSDSVTSPTELYFAKRGL
CCEECEEEEEEECCCCHHHHHHHHHCCCCCCCCEEEECCCCCCCCCCCCCHHHHHHHCCE
LYTYVNGKRYDTTHLHIREWLECIRQGKTPSCNIDAAFQEAMTAHMGTRAYLEGRTMYWD
EEEEECCCCCCCHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHCCCCEEECCCEEEEC
KDKEEIVRGELA
CCHHHHHHCCCC
>Mature Secondary Structure 
ATEDAKNTPSQEQMPDKGRRDTLKTLATVPILGALAYGVYQKRKDALRGRNISDVFQVS
CCCCCCCCCCHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHC
NRQASYLEPQGDGKKIRIGLIGFGIRGKQLMRAAGFAEPSWIDKMKEANKLNKKDTRYQQ
CCCCCCCCCCCCCCEEEEEEEEECCCHHHHHHHHCCCCHHHHHHHHHHHHCCCHHHHHHH
YMEQDDLNIEITAVCDIFDVYGEAAVLTGSNIHREGSDGKFGPAPKRYRTYQELVTAPDV
HHHHCCCCEEEEEEHHHHHHHCCEEEEECCCCCCCCCCCCCCCCCHHHHHHHHHHCCCCC
DAVIIAGPDHWHSTIAMAAARAGKHVYCEKPLSWTVPETYMVRQVIKETGVVFQLGHQGR
CEEEEECCCHHHHHHHHHHHHCCCEEEECCCCCCCCCHHHHHHHHHHHCCCEEEECCCCC
QTDCYQKAEEIIGNGLLGPVNLIEVCTNRNSPNGAWVYDIIEGSNPNTIDWKQFEGDPER
CCHHHHHHHHHHCCCCCCHHHHHHHHHCCCCCCCCEEEEEEECCCCCCCCHHHCCCCHHH
IKEYMDYMTSNKLERYIGPDERSKFSLERFFRWRCWWDYSTGLSGDLLTHEYDAVNQIMH
HHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHEEEEEEECCCCCCCCCHHHHHHHHHHHHH
VGIPHSATSSGGVYFFKDGRTVPDVLQTTFEWPDRDLTMLYSATLASSRNRGKVFMGHDA
CCCCCCCCCCCCEEEEECCCCHHHHHHHHHCCCCCCHHHHHHHHHHCCCCCCCEEECCCC
SMEVSNILAITVDQDSTRYADKIKEGIIPTDTPFYTYVPGQNSSDSVTSPTELYFAKRGL
CCEECEEEEEEECCCCHHHHHHHHHCCCCCCCCEEEECCCCCCCCCCCCCHHHHHHHCCE
LYTYVNGKRYDTTHLHIREWLECIRQGKTPSCNIDAAFQEAMTAHMGTRAYLEGRTMYWD
EEEEECCCCCCCHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHCCCCEEECCCEEEEC
KDKEEIVRGELA
CCHHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 9384377; 9025289 [H]