| Definition | Parabacteroides distasonis ATCC 8503 chromosome, complete genome. |
|---|---|
| Accession | NC_009615 |
| Length | 4,811,379 |
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The map label for this gene is 150009193
Identifier: 150009193
GI number: 150009193
Start: 3071844
End: 3073292
Strand: Reverse
Name: 150009193
Synonym: BDI_2595
Alternate gene names: NA
Gene position: 3073292-3071844 (Counterclockwise)
Preceding gene: 150009194
Following gene: 150009191
Centisome position: 63.88
GC content: 45.89
Gene sequence:
>1449_bases ATGAGACATTTATTGAGTATATGTATCGCTTTATTGTTCCTCGGAGGTGTGAGCCTACAGGCACAGAACGGTGTGCGGGG AACTGTTAGTTTCGAGAATGTAAGCGCAAAGAAGGACGGAAGCCAGCTTATGATGAATTTTACGACCAATCTGAGTAATC TGCGTTTGAAATCCCAAGAGATGGTCATACTGACACCGGTATTGCAATCGGTGGATAAATCGCAGTCTTACCAGTTTAAC CCGATCGTGATTACCGGGCGGGCACGTATGAAGGCGTTGAACCGTGAGTTGGGTTTCGATAGTTATGAATTTCCCCAAAC TCCTAGCTTGATTATCCGTCAGACGAAGAAGGGGCCGGAATTGATTCCGGTGGAATTGTCCGTACCCTATGCGGGATGGA TGCGAAACGCTACCTTGATGGTGGATGAGAATACCACGGGATGCGCTTCTTGTGAGGTCTCAAATGACATCTATGGGGTG ATGAGCCGTGTATTGCCTCCGTTAGCCCCTCCCGTTTATGAGCTTAGCTATGTTACTCCTCCGGTAGAACCTGTGAAACA ACGGAGCGAGACGCATTCCGCTTATTTAAACTTTGAGGTAGGCAAGTCCGTATTGTTACGTGATTTCAAAGATAACGCTA CCGTGCTGAATGAGGTGAATAAGATTGTAACGGAAGTCCGTAACGATAAGAATCTAAGCTTTACCGAATTTAAGGTTACC GGATACGCTTCCCCGGAAGGTGGCTACGATTATAATATGAGATTGTCCGAGAGTCGTGCCAAGGCTTTTGTCGCTTACAT GAAAGATAAGGAGAAGATGGATCCTTCCTTGATGAAAGTGAATTGGATGGGTGAGGATTGGATCGGATTGCGTCAAGAGG TTACGAAATCAGATTTGGCGAATAAGAAGGAGATTCTGGAGATCTTGGATATTCAAGATATAAACAAGCGCAAGGCTAAA CTACATGCCTTGAACGGAGGTCGGACTTATAAGATATTATTGGATAAATACTATCCTCCTTTAAGACGTATTGATTATAC CTTGGCTTATATCGCACGTCCGTTCGACGTGAACGAGGCCAAGCAAGTGATCAAAACGAAACCTCAATATTTAAGTTTGA ATGAGATGTTCTTGGTAGCCAATTCTTATGATAAAGGTAGCGATCAGTTCAAGGAGGTATTCGATATCGCCGTTCGTCTT TATCCGACCGACCCGATCGCTCAATTAAATACGGCGGCCCTTGAGATTGAGACTGGTGCTTACGATCCGGCCATCAGTCG TTTGCAAGGTATTAATTTGCCGGAAGCATGGAATAACCTAGGTGTCGCTTATGCGATGAAGAAGGATTATACGACCGCTA TGCAATATTTCGATCAAGCTGCCCAAGCCGGCATGCAGGATGCCGCCGCGAACCGGGATGAGCTGGCCGCTTGGTTGGCC GAGCAATAA
Upstream 100 bases:
>100_bases TGGCTCCAAGATCGAGACCAAGAACTCGAACTATTGGGGTGTAACGAAAGCGGCCCTTTCTATCATTTATTTTATCCACT AAAAAACGATCTAGAGAGAT
Downstream 100 bases:
>100_bases TGGAGATACTTACCTTCGAATATAAAAAAAGCCCCCGTTTCCGGAGGCTTTTTTTGTGCTTATAATTTAGCTTTCCATTC ATTCATCAACTCGGTAATGG
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 482; Mature: 482
Protein sequence:
>482_residues MRHLLSICIALLFLGGVSLQAQNGVRGTVSFENVSAKKDGSQLMMNFTTNLSNLRLKSQEMVILTPVLQSVDKSQSYQFN PIVITGRARMKALNRELGFDSYEFPQTPSLIIRQTKKGPELIPVELSVPYAGWMRNATLMVDENTTGCASCEVSNDIYGV MSRVLPPLAPPVYELSYVTPPVEPVKQRSETHSAYLNFEVGKSVLLRDFKDNATVLNEVNKIVTEVRNDKNLSFTEFKVT GYASPEGGYDYNMRLSESRAKAFVAYMKDKEKMDPSLMKVNWMGEDWIGLRQEVTKSDLANKKEILEILDIQDINKRKAK LHALNGGRTYKILLDKYYPPLRRIDYTLAYIARPFDVNEAKQVIKTKPQYLSLNEMFLVANSYDKGSDQFKEVFDIAVRL YPTDPIAQLNTAALEIETGAYDPAISRLQGINLPEAWNNLGVAYAMKKDYTTAMQYFDQAAQAGMQDAAANRDELAAWLA EQ
Sequences:
>Translated_482_residues MRHLLSICIALLFLGGVSLQAQNGVRGTVSFENVSAKKDGSQLMMNFTTNLSNLRLKSQEMVILTPVLQSVDKSQSYQFN PIVITGRARMKALNRELGFDSYEFPQTPSLIIRQTKKGPELIPVELSVPYAGWMRNATLMVDENTTGCASCEVSNDIYGV MSRVLPPLAPPVYELSYVTPPVEPVKQRSETHSAYLNFEVGKSVLLRDFKDNATVLNEVNKIVTEVRNDKNLSFTEFKVT GYASPEGGYDYNMRLSESRAKAFVAYMKDKEKMDPSLMKVNWMGEDWIGLRQEVTKSDLANKKEILEILDIQDINKRKAK LHALNGGRTYKILLDKYYPPLRRIDYTLAYIARPFDVNEAKQVIKTKPQYLSLNEMFLVANSYDKGSDQFKEVFDIAVRL YPTDPIAQLNTAALEIETGAYDPAISRLQGINLPEAWNNLGVAYAMKKDYTTAMQYFDQAAQAGMQDAAANRDELAAWLA EQ >Mature_482_residues MRHLLSICIALLFLGGVSLQAQNGVRGTVSFENVSAKKDGSQLMMNFTTNLSNLRLKSQEMVILTPVLQSVDKSQSYQFN PIVITGRARMKALNRELGFDSYEFPQTPSLIIRQTKKGPELIPVELSVPYAGWMRNATLMVDENTTGCASCEVSNDIYGV MSRVLPPLAPPVYELSYVTPPVEPVKQRSETHSAYLNFEVGKSVLLRDFKDNATVLNEVNKIVTEVRNDKNLSFTEFKVT GYASPEGGYDYNMRLSESRAKAFVAYMKDKEKMDPSLMKVNWMGEDWIGLRQEVTKSDLANKKEILEILDIQDINKRKAK LHALNGGRTYKILLDKYYPPLRRIDYTLAYIARPFDVNEAKQVIKTKPQYLSLNEMFLVANSYDKGSDQFKEVFDIAVRL YPTDPIAQLNTAALEIETGAYDPAISRLQGINLPEAWNNLGVAYAMKKDYTTAMQYFDQAAQAGMQDAAANRDELAAWLA EQ
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 54325; Mature: 54325
Theoretical pI: Translated: 6.81; Mature: 6.81
Prosite motif: PS50005 TPR ; PS50293 TPR_REGION ; PS51123 OMPA_2
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.6 %Cys (Translated Protein) 3.5 %Met (Translated Protein) 4.1 %Cys+Met (Translated Protein) 0.6 %Cys (Mature Protein) 3.5 %Met (Mature Protein) 4.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MRHLLSICIALLFLGGVSLQAQNGVRGTVSFENVSAKKDGSQLMMNFTTNLSNLRLKSQE CHHHHHHHHHHHHHCCCEEEECCCCEEEEEECCCCCCCCCCCEEEEECCCCCCEEECCCC MVILTPVLQSVDKSQSYQFNPIVITGRARMKALNRELGFDSYEFPQTPSLIIRQTKKGPE EEEEEHHHHHCCCCCCEECCCEEEECHHHHHHHHHHCCCCCCCCCCCCHHHHEECCCCCC LIPVELSVPYAGWMRNATLMVDENTTGCASCEVSNDIYGVMSRVLPPLAPPVYELSYVTP EEEEEEECCCHHHHCCCEEEEECCCCCCEEEECCCHHHHHHHHHCCCCCCCCEEEEECCC PVEPVKQRSETHSAYLNFEVGKSVLLRDFKDNATVLNEVNKIVTEVRNDKNLSFTEFKVT CCHHHHHCCCCHHEEEEEECCCHHHHHHCCCCHHHHHHHHHHHHHHCCCCCCEEEEEEEE GYASPEGGYDYNMRLSESRAKAFVAYMKDKEKMDPSLMKVNWMGEDWIGLRQEVTKSDLA EECCCCCCCCEEEEECHHHHHHHHHHHHHHHHCCCCEEEEEECCCCHHHHHHHHHHHHHC NKKEILEILDIQDINKRKAKLHALNGGRTYKILLDKYYPPLRRIDYTLAYIARPFDVNEA CHHHHHHHHCCCCCCCHHHEEEEECCCCEEEEEEECCCCCHHHHHHHHHHHCCCCCHHHH KQVIKTKPQYLSLNEMFLVANSYDKGSDQFKEVFDIAVRLYPTDPIAQLNTAALEIETGA HHHHHCCCCEEECCEEEEEEECCCCCHHHHHHHHHHHEEEECCCCHHHCCCEEEEEECCC YDPAISRLQGINLPEAWNNLGVAYAMKKDYTTAMQYFDQAAQAGMQDAAANRDELAAWLA CCHHHHHHCCCCCCHHHHCCCEEEEEHHHHHHHHHHHHHHHHCCHHHHCCCHHHHHHHHH EQ CC >Mature Secondary Structure MRHLLSICIALLFLGGVSLQAQNGVRGTVSFENVSAKKDGSQLMMNFTTNLSNLRLKSQE CHHHHHHHHHHHHHCCCEEEECCCCEEEEEECCCCCCCCCCCEEEEECCCCCCEEECCCC MVILTPVLQSVDKSQSYQFNPIVITGRARMKALNRELGFDSYEFPQTPSLIIRQTKKGPE EEEEEHHHHHCCCCCCEECCCEEEECHHHHHHHHHHCCCCCCCCCCCCHHHHEECCCCCC LIPVELSVPYAGWMRNATLMVDENTTGCASCEVSNDIYGVMSRVLPPLAPPVYELSYVTP EEEEEEECCCHHHHCCCEEEEECCCCCCEEEECCCHHHHHHHHHCCCCCCCCEEEEECCC PVEPVKQRSETHSAYLNFEVGKSVLLRDFKDNATVLNEVNKIVTEVRNDKNLSFTEFKVT CCHHHHHCCCCHHEEEEEECCCHHHHHHCCCCHHHHHHHHHHHHHHCCCCCCEEEEEEEE GYASPEGGYDYNMRLSESRAKAFVAYMKDKEKMDPSLMKVNWMGEDWIGLRQEVTKSDLA EECCCCCCCCEEEEECHHHHHHHHHHHHHHHHCCCCEEEEEECCCCHHHHHHHHHHHHHC NKKEILEILDIQDINKRKAKLHALNGGRTYKILLDKYYPPLRRIDYTLAYIARPFDVNEA CHHHHHHHHCCCCCCCHHHEEEEECCCCEEEEEEECCCCCHHHHHHHHHHHCCCCCHHHH KQVIKTKPQYLSLNEMFLVANSYDKGSDQFKEVFDIAVRLYPTDPIAQLNTAALEIETGA HHHHHCCCCEEECCEEEEEEECCCCCHHHHHHHHHHHEEEECCCCHHHCCCEEEEEECCC YDPAISRLQGINLPEAWNNLGVAYAMKKDYTTAMQYFDQAAQAGMQDAAANRDELAAWLA CCHHHHHHCCCCCCHHHHCCCEEEEEHHHHHHHHHHHHHHHHCCHHHHCCCHHHHHHHHH EQ CC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA