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The map label for this gene is ycgM [H]

Identifier: 150009175

GI number: 150009175

Start: 3052483

End: 3053097

Strand: Reverse

Name: ycgM [H]

Synonym: BDI_2577

Alternate gene names: 150009175

Gene position: 3053097-3052483 (Counterclockwise)

Preceding gene: 150009176

Following gene: 150009174

Centisome position: 63.46

GC content: 44.55

Gene sequence:

>615_bases
ATGAAGATTATCGCCGTTGGAATGAACTATGCCGCTCACAATAAAGAGCTGCATCATTCGTTAGAATTATCAGAGCCTAC
TATTTTTATGAAGTCGGACTCCTCTTTGTTGAAAGATGGGAAACCGTTTTTTATTCCGGATTTTTCATCGGAAGTTCATT
ATGAGACGGAGATCGTGGTACGGATAGACCGTTTGGGGAAAAATATAGCCGAGCGTTTCGCTCATCGTTATTATAATGAG
GTTACGGTCGGTATTGATTTCACGGCACGGGATTTGCAGAATAAATTGCGTGCGCAAGGGCTACCGTGGGAAATTAGTAA
GGCGTTTGATAATTCGGCTGTGATCGGGACCTTTATTCCGCTGGAGCAAGCGGGGGATGTAAACCGGCTTCCATTCCATC
TGGATATCAATGGCTCGAAGGTACAGGAAGGCAATACCTCGAATATGCTGTTTTCGGTAGATAAGATTATTGCGTATGTA
AGTCGCTTCTTTACGCTGAAAATAGGCGATTTGATTTATACCGGAACACCTGCTGGCGTAGGTCCCGTGAAGATCGACGA
TCATCTGGAGGGATATCTTGGCGAGCGGAAGCTTCTGGATTTTTATGTGAGATGA

Upstream 100 bases:

>100_bases
CCGTATACGGGTGCCGGAACATATCGTAGTCCAGAACACTTCTATGTATGCGCATTTAGCTGTTATGTTTAATCGATTGA
ACTCAATGAATCACTAAAAT

Downstream 100 bases:

>100_bases
GAAGATTAATATATATATTCATTATAGGTTTATTACTTTGCTCATATACATGGGCGGATGGTAGCCGTTATGCTTCTAAC
TCCCTGTTATCGGAAGGGAA

Product: putative hydrolase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 204; Mature: 204

Protein sequence:

>204_residues
MKIIAVGMNYAAHNKELHHSLELSEPTIFMKSDSSLLKDGKPFFIPDFSSEVHYETEIVVRIDRLGKNIAERFAHRYYNE
VTVGIDFTARDLQNKLRAQGLPWEISKAFDNSAVIGTFIPLEQAGDVNRLPFHLDINGSKVQEGNTSNMLFSVDKIIAYV
SRFFTLKIGDLIYTGTPAGVGPVKIDDHLEGYLGERKLLDFYVR

Sequences:

>Translated_204_residues
MKIIAVGMNYAAHNKELHHSLELSEPTIFMKSDSSLLKDGKPFFIPDFSSEVHYETEIVVRIDRLGKNIAERFAHRYYNE
VTVGIDFTARDLQNKLRAQGLPWEISKAFDNSAVIGTFIPLEQAGDVNRLPFHLDINGSKVQEGNTSNMLFSVDKIIAYV
SRFFTLKIGDLIYTGTPAGVGPVKIDDHLEGYLGERKLLDFYVR
>Mature_204_residues
MKIIAVGMNYAAHNKELHHSLELSEPTIFMKSDSSLLKDGKPFFIPDFSSEVHYETEIVVRIDRLGKNIAERFAHRYYNE
VTVGIDFTARDLQNKLRAQGLPWEISKAFDNSAVIGTFIPLEQAGDVNRLPFHLDINGSKVQEGNTSNMLFSVDKIIAYV
SRFFTLKIGDLIYTGTPAGVGPVKIDDHLEGYLGERKLLDFYVR

Specific function: Unknown

COG id: COG0179

COG function: function code Q; 2-keto-4-pentenoate hydratase/2-oxohepta-3-ene-1,7-dioic acid hydratase (catechol pathway)

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the FAH family [H]

Homologues:

Organism=Homo sapiens, GI66348062, Length=200, Percent_Identity=39.5, Blast_Score=164, Evalue=6e-41,
Organism=Homo sapiens, GI215422413, Length=189, Percent_Identity=39.6825396825397, Blast_Score=164, Evalue=6e-41,
Organism=Homo sapiens, GI13654274, Length=189, Percent_Identity=39.6825396825397, Blast_Score=163, Evalue=8e-41,
Organism=Homo sapiens, GI156231349, Length=181, Percent_Identity=38.121546961326, Blast_Score=116, Evalue=1e-26,
Organism=Homo sapiens, GI40786394, Length=181, Percent_Identity=37.0165745856354, Blast_Score=110, Evalue=8e-25,
Organism=Escherichia coli, GI1787428, Length=189, Percent_Identity=39.1534391534392, Blast_Score=149, Evalue=1e-37,
Organism=Caenorhabditis elegans, GI17557057, Length=203, Percent_Identity=33.9901477832512, Blast_Score=133, Evalue=8e-32,
Organism=Saccharomyces cerevisiae, GI6324161, Length=227, Percent_Identity=32.15859030837, Blast_Score=108, Evalue=5e-25,
Organism=Drosophila melanogaster, GI28571789, Length=204, Percent_Identity=35.7843137254902, Blast_Score=137, Evalue=7e-33,
Organism=Drosophila melanogaster, GI28572127, Length=187, Percent_Identity=32.620320855615, Blast_Score=89, Evalue=3e-18,
Organism=Drosophila melanogaster, GI24663695, Length=187, Percent_Identity=29.4117647058824, Blast_Score=70, Evalue=9e-13,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR002529
- InterPro:   IPR011234 [H]

Pfam domain/function: PF01557 FAA_hydrolase [H]

EC number: NA

Molecular weight: Translated: 23069; Mature: 23069

Theoretical pI: Translated: 6.40; Mature: 6.40

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
2.0 %Met     (Translated Protein)
2.0 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
2.0 %Met     (Mature Protein)
2.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKIIAVGMNYAAHNKELHHSLELSEPTIFMKSDSSLLKDGKPFFIPDFSSEVHYETEIVV
CEEEEEECCCCCCCHHHHHEEECCCCEEEEECCCHHHHCCCCEEECCCCCCEEEEEEEEE
RIDRLGKNIAERFAHRYYNEVTVGIDFTARDLQNKLRAQGLPWEISKAFDNSAVIGTFIP
EEHHHHHHHHHHHHHHHHCEEEEEEEECHHHHHHHHHHCCCCEEHHHHCCCCEEEEEEEC
LEQAGDVNRLPFHLDINGSKVQEGNTSNMLFSVDKIIAYVSRFFTLKIGDLIYTGTPAGV
HHCCCCCCCCCEEEECCCCEECCCCCCCCEEEHHHHHHHHHHHHEEEECCEEEECCCCCC
GPVKIDDHLEGYLGERKLLDFYVR
CCEEECCHHHHHCCCHHHEEEECC
>Mature Secondary Structure
MKIIAVGMNYAAHNKELHHSLELSEPTIFMKSDSSLLKDGKPFFIPDFSSEVHYETEIVV
CEEEEEECCCCCCCHHHHHEEECCCCEEEEECCCHHHHCCCCEEECCCCCCEEEEEEEEE
RIDRLGKNIAERFAHRYYNEVTVGIDFTARDLQNKLRAQGLPWEISKAFDNSAVIGTFIP
EEHHHHHHHHHHHHHHHHCEEEEEEEECHHHHHHHHHHCCCCEEHHHHCCCCEEEEEEEC
LEQAGDVNRLPFHLDINGSKVQEGNTSNMLFSVDKIIAYVSRFFTLKIGDLIYTGTPAGV
HHCCCCCCCCCEEEECCCCEECCCCCCCCEEEHHHHHHHHHHHHEEEECCEEEECCCCCC
GPVKIDDHLEGYLGERKLLDFYVR
CCEEECCHHHHHCCCHHHEEEECC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 8905232; 9278503; 10806384 [H]