Definition Parabacteroides distasonis ATCC 8503 chromosome, complete genome.
Accession NC_009615
Length 4,811,379

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The map label for this gene is 150009123

Identifier: 150009123

GI number: 150009123

Start: 2983369

End: 2984964

Strand: Direct

Name: 150009123

Synonym: BDI_2524

Alternate gene names: NA

Gene position: 2983369-2984964 (Clockwise)

Preceding gene: 150009122

Following gene: 150009124

Centisome position: 62.01

GC content: 47.87

Gene sequence:

>1596_bases
ATGTTATACAAGAAATTATATAAAAACATTTCAGTAGTAGCGTTAGGGACAGCCCTGTTCTCGCTACCCGTGTTCACCGC
CTGCGAAAGCGACGTCGTAGACCTTGAACCTGTTGACAAATTCTCCGAGCTTACGGCATACGGGACAGAAGAACGTTGCG
AGTTAGCCGTAGTCGGAGCTTACGATGCCGCACAATGTGGTATGTACGTAGATCCAAATGACTTTGGGTGGGCACGCGGT
TATCCTTTTGGAGCGGCCAGTATATTGCAAGGCGAAATGCGCGGTGAAGATATGAACCTAACCGCCCAATTCTATGATTA
TACCTATTCCGCGACCTATAATTTGACTACCGCTAATAACGTGGCGATGTGGGAAACCTCTTTCGAGGCTATTAACCGCT
ATAATACGGTATACGCAGGTATAGAAGGTGCGGTAGCTGCGGGTGTCATAACCGAAGAGAAAGGGAATCAGTACAAAGGA
GAATGCCTGTTCTTACGTGCGTTAACCTATCACAACTTGATGATCCATTATGCCCTGCCCTACAACGTAGAAGGTAACAA
TAACTACGGTATGCCTATTTATACGAAAGCCGTAAATGATCCCAGCCAACTCGCTGAGCAACAAAGCATAGGCCGTTCTA
CCGTTAAGGATACTTACGATCAGATATTAAGCGACTTGAATAATGCGGAAAGCATGCTTCCGGACATTATCGATGCCGAT
AAGATCGGCCGCGCAAGCAAAGGTGCCGCCATAGCACTGAAAACGCGCGTATATTTGCATATGCGTGATTGGAACAATGT
AGTTACTGAAGCTAAGAAACTGGAAGGCGGACGTTTCATTCTGGAAACCAATCCAGCCACTCCTTTCGTTTCTTACAAAG
ACAATCAGGAATCTATATTCTCCATTCCGAATGACTCTCAAGATAACGGGTCTGTAAATGGAGCTATGTCCGCTATGATG
TCTGCCCGTGAAGGTGGCCGTGCGATGTGCCCGACATCCCCTACCCTTTACAACTCCAAATTCTGGAAAGGGGATGACAA
GCGTCGTAACCTCGTCCTTTATCGTGCGTCTGACGATTATTACTTCTGTGATAAATACCAGAATCCCCAAACACGTGAAG
AGTACGCCCCGATCCTGCGCTATGCCGAGGTATTGCTAAACGAGGCCGAGGCTGCCGCACGTGCGGGAGACAAGACTCTC
GCATTGGAGAAATTGAATCAAGTAAGAGACCGTTCTTTGGCCGACCCCGCTACACAGACGTATAAGGCAAGCGATTTCGC
CAACACGAAAGCACTGGTGGAAGCTATCCTTTGGGAGCGTCGCATTGAGTTCCAAGGTGAAGGTCGCCGTTGGGAAGACA
TTCATCGTTTAGCGGCTGACGACTTGCTGCCGTCCGGTGGTATTCCCGCTAAAATCGAATATAACAATGTGAAGAACCAA
GGCGCATTCGTTGTTGGTGGAGAAGTGAAAGCTGAATGGTTCGGCAACAGCAAACAGTTCATCCCGTACACGGATAAACG
CTTTATTTGGCCGATTCCATTGAATGATATATTAAGAAACCCCACGCTAGCCGCACAACAGAACGCAGGCTGGTAG

Upstream 100 bases:

>100_bases
TCGTTTAGGTGTAGATTGGAACGGTATGCCACAGCAACGTTCATTCACTTTTGGAGCGAACATTACATTCTAATTTCACA
AACTAAGAAAAGTTACAATT

Downstream 100 bases:

>100_bases
AATATAGACACACTCTTATTTTTTACTATGCAGGGGACATGAGAGGGCGAGACCGGGAGGTTCCGCCCTCTTTTCTTTTA
AAACGTATTGACATAATAAT

Product: hypothetical protein

Products: NA

Alternate protein names: RagB/SusD Domain-Containing Protein; Outer Membrane Protein; SusD/RagB Family Protein; Ragb/Susd Domain Protein; Liporotein; Ragb/Susd DomaiN-Containing Protein

Number of amino acids: Translated: 531; Mature: 531

Protein sequence:

>531_residues
MLYKKLYKNISVVALGTALFSLPVFTACESDVVDLEPVDKFSELTAYGTEERCELAVVGAYDAAQCGMYVDPNDFGWARG
YPFGAASILQGEMRGEDMNLTAQFYDYTYSATYNLTTANNVAMWETSFEAINRYNTVYAGIEGAVAAGVITEEKGNQYKG
ECLFLRALTYHNLMIHYALPYNVEGNNNYGMPIYTKAVNDPSQLAEQQSIGRSTVKDTYDQILSDLNNAESMLPDIIDAD
KIGRASKGAAIALKTRVYLHMRDWNNVVTEAKKLEGGRFILETNPATPFVSYKDNQESIFSIPNDSQDNGSVNGAMSAMM
SAREGGRAMCPTSPTLYNSKFWKGDDKRRNLVLYRASDDYYFCDKYQNPQTREEYAPILRYAEVLLNEAEAAARAGDKTL
ALEKLNQVRDRSLADPATQTYKASDFANTKALVEAILWERRIEFQGEGRRWEDIHRLAADDLLPSGGIPAKIEYNNVKNQ
GAFVVGGEVKAEWFGNSKQFIPYTDKRFIWPIPLNDILRNPTLAAQQNAGW

Sequences:

>Translated_531_residues
MLYKKLYKNISVVALGTALFSLPVFTACESDVVDLEPVDKFSELTAYGTEERCELAVVGAYDAAQCGMYVDPNDFGWARG
YPFGAASILQGEMRGEDMNLTAQFYDYTYSATYNLTTANNVAMWETSFEAINRYNTVYAGIEGAVAAGVITEEKGNQYKG
ECLFLRALTYHNLMIHYALPYNVEGNNNYGMPIYTKAVNDPSQLAEQQSIGRSTVKDTYDQILSDLNNAESMLPDIIDAD
KIGRASKGAAIALKTRVYLHMRDWNNVVTEAKKLEGGRFILETNPATPFVSYKDNQESIFSIPNDSQDNGSVNGAMSAMM
SAREGGRAMCPTSPTLYNSKFWKGDDKRRNLVLYRASDDYYFCDKYQNPQTREEYAPILRYAEVLLNEAEAAARAGDKTL
ALEKLNQVRDRSLADPATQTYKASDFANTKALVEAILWERRIEFQGEGRRWEDIHRLAADDLLPSGGIPAKIEYNNVKNQ
GAFVVGGEVKAEWFGNSKQFIPYTDKRFIWPIPLNDILRNPTLAAQQNAGW
>Mature_531_residues
MLYKKLYKNISVVALGTALFSLPVFTACESDVVDLEPVDKFSELTAYGTEERCELAVVGAYDAAQCGMYVDPNDFGWARG
YPFGAASILQGEMRGEDMNLTAQFYDYTYSATYNLTTANNVAMWETSFEAINRYNTVYAGIEGAVAAGVITEEKGNQYKG
ECLFLRALTYHNLMIHYALPYNVEGNNNYGMPIYTKAVNDPSQLAEQQSIGRSTVKDTYDQILSDLNNAESMLPDIIDAD
KIGRASKGAAIALKTRVYLHMRDWNNVVTEAKKLEGGRFILETNPATPFVSYKDNQESIFSIPNDSQDNGSVNGAMSAMM
SAREGGRAMCPTSPTLYNSKFWKGDDKRRNLVLYRASDDYYFCDKYQNPQTREEYAPILRYAEVLLNEAEAAARAGDKTL
ALEKLNQVRDRSLADPATQTYKASDFANTKALVEAILWERRIEFQGEGRRWEDIHRLAADDLLPSGGIPAKIEYNNVKNQ
GAFVVGGEVKAEWFGNSKQFIPYTDKRFIWPIPLNDILRNPTLAAQQNAGW

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 59439; Mature: 59439

Theoretical pI: Translated: 4.73; Mature: 4.73

Prosite motif: PS00013 PROKAR_LIPOPROTEIN

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.1 %Cys     (Translated Protein)
2.4 %Met     (Translated Protein)
3.6 %Cys+Met (Translated Protein)
1.1 %Cys     (Mature Protein)
2.4 %Met     (Mature Protein)
3.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLYKKLYKNISVVALGTALFSLPVFTACESDVVDLEPVDKFSELTAYGTEERCELAVVGA
CCHHHHHCCCEEEEEHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHCCCCCCCCEEEEEC
YDAAQCGMYVDPNDFGWARGYPFGAASILQGEMRGEDMNLTAQFYDYTYSATYNLTTANN
CCHHHCCCEECCCCCCCCCCCCCCHHHHHHHHHCCCCCEEEEEEEEEEEEEEEEEEECCC
VAMWETSFEAINRYNTVYAGIEGAVAAGVITEEKGNQYKGECLFLRALTYHNLMIHYALP
EEEEEHHHHHHHHCCEEEECCCCCCEECEEECCCCCCCCCCEEEEEEEHHCCEEEEEEEE
YNVEGNNNYGMPIYTKAVNDPSQLAEQQSIGRSTVKDTYDQILSDLNNAESMLPDIIDAD
EEECCCCCCCCEEEEECCCCHHHHHHHHHHCHHHHHHHHHHHHHHHCHHHHHHHHHHCHH
KIGRASKGAAIALKTRVYLHMRDWNNVVTEAKKLEGGRFILETNPATPFVSYKDNQESIF
HCCCCCCCCEEEEEEEEEEEEECHHHHHHHHHHCCCCEEEEECCCCCCEEEECCCCCCEE
SIPNDSQDNGSVNGAMSAMMSAREGGRAMCPTSPTLYNSKFWKGDDKRRNLVLYRASDDY
ECCCCCCCCCCHHHHHHHHHHHHCCCCEECCCCCCCCCCCCCCCCCCCCEEEEEEECCCE
YFCDKYQNPQTREEYAPILRYAEVLLNEAEAAARAGDKTLALEKLNQVRDRSLADPATQT
EEECCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHCCCCCCCHHC
YKASDFANTKALVEAILWERRIEFQGEGRRWEDIHRLAADDLLPSGGIPAKIEYNNVKNQ
EECCCHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHCCCCCCCCEEEEECCCCCC
GAFVVGGEVKAEWFGNSKQFIPYTDKRFIWPIPLNDILRNPTLAAQQNAGW
CCEEECCEEEEEEECCCCCCCEECCCCEEECCCHHHHHCCCCCCCCCCCCC
>Mature Secondary Structure
MLYKKLYKNISVVALGTALFSLPVFTACESDVVDLEPVDKFSELTAYGTEERCELAVVGA
CCHHHHHCCCEEEEEHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHCCCCCCCCEEEEEC
YDAAQCGMYVDPNDFGWARGYPFGAASILQGEMRGEDMNLTAQFYDYTYSATYNLTTANN
CCHHHCCCEECCCCCCCCCCCCCCHHHHHHHHHCCCCCEEEEEEEEEEEEEEEEEEECCC
VAMWETSFEAINRYNTVYAGIEGAVAAGVITEEKGNQYKGECLFLRALTYHNLMIHYALP
EEEEEHHHHHHHHCCEEEECCCCCCEECEEECCCCCCCCCCEEEEEEEHHCCEEEEEEEE
YNVEGNNNYGMPIYTKAVNDPSQLAEQQSIGRSTVKDTYDQILSDLNNAESMLPDIIDAD
EEECCCCCCCCEEEEECCCCHHHHHHHHHHCHHHHHHHHHHHHHHHCHHHHHHHHHHCHH
KIGRASKGAAIALKTRVYLHMRDWNNVVTEAKKLEGGRFILETNPATPFVSYKDNQESIF
HCCCCCCCCEEEEEEEEEEEEECHHHHHHHHHHCCCCEEEEECCCCCCEEEECCCCCCEE
SIPNDSQDNGSVNGAMSAMMSAREGGRAMCPTSPTLYNSKFWKGDDKRRNLVLYRASDDY
ECCCCCCCCCCHHHHHHHHHHHHCCCCEECCCCCCCCCCCCCCCCCCCCEEEEEEECCCE
YFCDKYQNPQTREEYAPILRYAEVLLNEAEAAARAGDKTLALEKLNQVRDRSLADPATQT
EEECCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHCCCCCCCHHC
YKASDFANTKALVEAILWERRIEFQGEGRRWEDIHRLAADDLLPSGGIPAKIEYNNVKNQ
EECCCHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHCCCCCCCCEEEEECCCCCC
GAFVVGGEVKAEWFGNSKQFIPYTDKRFIWPIPLNDILRNPTLAAQQNAGW
CCEEECCEEEEEEECCCCCCCEECCCCEEECCCHHHHHCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA