| Definition | Parabacteroides distasonis ATCC 8503 chromosome, complete genome. |
|---|---|
| Accession | NC_009615 |
| Length | 4,811,379 |
Click here to switch to the map view.
The map label for this gene is yjbH [C]
Identifier: 150009096
GI number: 150009096
Start: 2943853
End: 2944584
Strand: Reverse
Name: yjbH [C]
Synonym: BDI_2497
Alternate gene names: 150009096
Gene position: 2944584-2943853 (Counterclockwise)
Preceding gene: 150009097
Following gene: 150009093
Centisome position: 61.2
GC content: 44.54
Gene sequence:
>732_bases ATGAAGAAATTACTCTTATTGATCATATTCTTAAGTTGCTGGACCTTACTTCCGGCTCAATTATCTTATGGCACGACAGG GTTATTGCATGCCCCGTCCGCCGATATGCAAAAGGACAAGACCGTGATGCTTGGCGGAAACTTCTTGCATCAAGAGCTTA CGCCTCCCAAGTTTAATTTTAATACGTGGAATTATTATTTGAACGTGACGATCTTCCCGTTTCTGGAAGTAGCGTATACT TGTACGCTGTTTACGGCCGAGAGCCTTGGATTGGATAAGCATGGCTATTCCGGATTCACGAACCAAGATCGTTATTTCTC CGCCCGCTTACGTGTGTTGAAAGAAAGCAAATACATCCCCGCTGTCGTGCTGGGGACTTCGGACCCTTTTACGTCATCCG GGCATAAATTCGCTTCGGCTACGGGAAACGGCTATTTCTGCCGTTATTATCTGGCCGCTACCAAACATTTTCAGCTGGGA AGGGAAACCTTAGGCGTTCATTTATCCTATCTGTATAACCGCCGTGAGGATTATCCCTTGAACGGTGTGGCGGGAGGTAT CACCTACAATCCTTCATTCGCCCCGCATTTGAACGTCATAGCCGAATACGATTCGAAAGACTTCGCTATGGGAGCCACTT ACCTACTATTCAATCATATACATTTTCAATTTGAATTGCAGCGAATGAAATATTTCTCCGGTGGACTGTGCTATAAGATT TATTTAAAATAA
Upstream 100 bases:
>100_bases TGGCAATAACGCCGGTGGCGGTATCATCATCCCGGATTAATGCTTGATATTTGAAGCTTAAATAATGTTGAGCCGGAAGT TTATAAGTAAACAAAGAAAA
Downstream 100 bases:
>100_bases AAAGAGGTTCAGCTTTTGTCCGTTTTTAATCCGCTTGGAGGCGAACGGTTAGGCTGAACCTTTTTATATCTTGTTACGCT GTCGCGCTAGCCATATCTAC
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 243; Mature: 243
Protein sequence:
>243_residues MKKLLLLIIFLSCWTLLPAQLSYGTTGLLHAPSADMQKDKTVMLGGNFLHQELTPPKFNFNTWNYYLNVTIFPFLEVAYT CTLFTAESLGLDKHGYSGFTNQDRYFSARLRVLKESKYIPAVVLGTSDPFTSSGHKFASATGNGYFCRYYLAATKHFQLG RETLGVHLSYLYNRREDYPLNGVAGGITYNPSFAPHLNVIAEYDSKDFAMGATYLLFNHIHFQFELQRMKYFSGGLCYKI YLK
Sequences:
>Translated_243_residues MKKLLLLIIFLSCWTLLPAQLSYGTTGLLHAPSADMQKDKTVMLGGNFLHQELTPPKFNFNTWNYYLNVTIFPFLEVAYT CTLFTAESLGLDKHGYSGFTNQDRYFSARLRVLKESKYIPAVVLGTSDPFTSSGHKFASATGNGYFCRYYLAATKHFQLG RETLGVHLSYLYNRREDYPLNGVAGGITYNPSFAPHLNVIAEYDSKDFAMGATYLLFNHIHFQFELQRMKYFSGGLCYKI YLK >Mature_243_residues MKKLLLLIIFLSCWTLLPAQLSYGTTGLLHAPSADMQKDKTVMLGGNFLHQELTPPKFNFNTWNYYLNVTIFPFLEVAYT CTLFTAESLGLDKHGYSGFTNQDRYFSARLRVLKESKYIPAVVLGTSDPFTSSGHKFASATGNGYFCRYYLAATKHFQLG RETLGVHLSYLYNRREDYPLNGVAGGITYNPSFAPHLNVIAEYDSKDFAMGATYLLFNHIHFQFELQRMKYFSGGLCYKI YLK
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Attached To The Membrane By A Lipid Anchor [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 27704; Mature: 27704
Theoretical pI: Translated: 9.11; Mature: 9.11
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.6 %Cys (Translated Protein) 2.1 %Met (Translated Protein) 3.7 %Cys+Met (Translated Protein) 1.6 %Cys (Mature Protein) 2.1 %Met (Mature Protein) 3.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKKLLLLIIFLSCWTLLPAQLSYGTTGLLHAPSADMQKDKTVMLGGNFLHQELTPPKFNF CHHHHHHHHHHHHHHHHHHHHCCCCCEEEECCCCCCCCCCEEEECCCCHHHCCCCCCCCC NTWNYYLNVTIFPFLEVAYTCTLFTAESLGLDKHGYSGFTNQDRYFSARLRVLKESKYIP CEEEEEEEEEEHHHHHHHHHHEEEEHHHCCCCCCCCCCCCCCCHHHHHHHHHHHCCCCCC AVVLGTSDPFTSSGHKFASATGNGYFCRYYLAATKHFQLGRETLGVHLSYLYNRREDYPL EEEEECCCCCCCCCCEEEECCCCCEEEEEEEEEHHHHHCCHHHHHHHHEEHHCCCCCCCC NGVAGGITYNPSFAPHLNVIAEYDSKDFAMGATYLLFNHIHFQFELQRMKYFSGGLCYKI CCEECCEEECCCCCCCEEEEEECCCCCHHHHHHEEEEEEEEEEEEEEEHHHCCCCEEEEE YLK EEC >Mature Secondary Structure MKKLLLLIIFLSCWTLLPAQLSYGTTGLLHAPSADMQKDKTVMLGGNFLHQELTPPKFNF CHHHHHHHHHHHHHHHHHHHHCCCCCEEEECCCCCCCCCCEEEECCCCHHHCCCCCCCCC NTWNYYLNVTIFPFLEVAYTCTLFTAESLGLDKHGYSGFTNQDRYFSARLRVLKESKYIP CEEEEEEEEEEHHHHHHHHHHEEEEHHHCCCCCCCCCCCCCCCHHHHHHHHHHHCCCCCC AVVLGTSDPFTSSGHKFASATGNGYFCRYYLAATKHFQLGRETLGVHLSYLYNRREDYPL EEEEECCCCCCCCCCEEEECCCCCEEEEEEEEEHHHHHCCHHHHHHHHEEHHCCCCCCCC NGVAGGITYNPSFAPHLNVIAEYDSKDFAMGATYLLFNHIHFQFELQRMKYFSGGLCYKI CCEECCEEECCCCCCCEEEEEECCCCCHHHHHHEEEEEEEEEEEEEEEHHHCCCCEEEEE YLK EEC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 7.0
TargetDB status: NA
Availability: NA
References: NA