Definition Parabacteroides distasonis ATCC 8503 chromosome, complete genome.
Accession NC_009615
Length 4,811,379

Click here to switch to the map view.

The map label for this gene is 150009075

Identifier: 150009075

GI number: 150009075

Start: 2917094

End: 2918152

Strand: Reverse

Name: 150009075

Synonym: BDI_2476

Alternate gene names: NA

Gene position: 2918152-2917094 (Counterclockwise)

Preceding gene: 150009080

Following gene: 150009074

Centisome position: 60.65

GC content: 37.2

Gene sequence:

>1059_bases
ATGAAAACTGAAAATAGACATATTAATTTCCAAGAGCCGGAAGGTATGATGCTTTTACGGTATATAAAGGACACAGCTTC
CAATGAGGAAAAATCTTATATTGAAGCTTGGCTGGAAGCGGATGAAAATAATAAGAGGATCTTATTACAGACCGCCCGTA
TATATTATGCGAACAATGCGATGGAACGGATCGCTAGCCGAAATCCATTGATTGCCTACGAAAAGCTGGAACAACGATTA
GCAAAACGGACCCGTTTATATTGGCTGAAGAGGTTCTCTGTCGCTGCGGCTTGTATAATTGCTATCATTGGACTATCAAC
CTTATTTTCCCATAGAAAGGTTGATTCTGAATTTGGAGATCCTCAAATTATAACACTTCAGGCAAATGCGGGAGTCCGTA
CACGCTTTAATTTACCGGATGGTACTGTTGTTTATCTAAATTCGGGTAGTGTTTTATCCTATCCGATGTCTTATGACCAA
AAAGAAAGAAAAGTATATTTATCAGGAGAAGCCTATTTTAAAGTCACTCACAACGAAAAACAACCTTTTATTGTCAGTAC
TTCAGGAGATCAGCATAGGGTTAGAGTTTTAGGCACGGAGTTTAATATACAAGCTTATGGGGATGAGAATATAATTTCGA
CTACTTTAGTGACGGGCTCCGTAAATCTCGAGGTGAAGAATAAATCAGGGAATGTGAGTCATAGGACGTTACTACCATCC
GAAAAAGCGATTTGCAACTTGGATAAAGAAGAAATTTCTGTGATGAAAATAAACACGATGTATGAAACCGCATGGATGGA
TGGCAAACTGATGTTCAAGGATACGCCTTTACCTGAGGCTTTGAAAAAATTGTCATATTACTATAATGTTGAATTTGTGA
TTCAGGATGCGGAGATTAAAAGCTATTGTTTAACCGGTATTTTAGATAATAGGTTGCTATCTCAGACACTAGACTATTTG
AGAATATCTTCAAATATTGATTATCGTATAGAAGATATGAAGACAGATGACAGCAAAGGTACTAACCGTACTCGAGTTAT
ACTTTGGAAAGGAAAATAA

Upstream 100 bases:

>100_bases
TGCGGTTACCTTGGACTAAAAATGAGAAAGTTGAAAAAAATTGCTTTTTAGTTAAGGGTGTGTTCTTTCAGGATTGTCTT
AGTTATAGAAACAGATAAGA

Downstream 100 bases:

>100_bases
AGAAAAATGTATAACAATTAAATAATATGGGCCTATGGAATAAAAGAACAAGAAAGTAGACTTGGTCTATCTAAAAAACA
TACGGGAAAATGTTACCAGC

Product: putative anti-sigma factor

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 352; Mature: 352

Protein sequence:

>352_residues
MKTENRHINFQEPEGMMLLRYIKDTASNEEKSYIEAWLEADENNKRILLQTARIYYANNAMERIASRNPLIAYEKLEQRL
AKRTRLYWLKRFSVAAACIIAIIGLSTLFSHRKVDSEFGDPQIITLQANAGVRTRFNLPDGTVVYLNSGSVLSYPMSYDQ
KERKVYLSGEAYFKVTHNEKQPFIVSTSGDQHRVRVLGTEFNIQAYGDENIISTTLVTGSVNLEVKNKSGNVSHRTLLPS
EKAICNLDKEEISVMKINTMYETAWMDGKLMFKDTPLPEALKKLSYYYNVEFVIQDAEIKSYCLTGILDNRLLSQTLDYL
RISSNIDYRIEDMKTDDSKGTNRTRVILWKGK

Sequences:

>Translated_352_residues
MKTENRHINFQEPEGMMLLRYIKDTASNEEKSYIEAWLEADENNKRILLQTARIYYANNAMERIASRNPLIAYEKLEQRL
AKRTRLYWLKRFSVAAACIIAIIGLSTLFSHRKVDSEFGDPQIITLQANAGVRTRFNLPDGTVVYLNSGSVLSYPMSYDQ
KERKVYLSGEAYFKVTHNEKQPFIVSTSGDQHRVRVLGTEFNIQAYGDENIISTTLVTGSVNLEVKNKSGNVSHRTLLPS
EKAICNLDKEEISVMKINTMYETAWMDGKLMFKDTPLPEALKKLSYYYNVEFVIQDAEIKSYCLTGILDNRLLSQTLDYL
RISSNIDYRIEDMKTDDSKGTNRTRVILWKGK
>Mature_352_residues
MKTENRHINFQEPEGMMLLRYIKDTASNEEKSYIEAWLEADENNKRILLQTARIYYANNAMERIASRNPLIAYEKLEQRL
AKRTRLYWLKRFSVAAACIIAIIGLSTLFSHRKVDSEFGDPQIITLQANAGVRTRFNLPDGTVVYLNSGSVLSYPMSYDQ
KERKVYLSGEAYFKVTHNEKQPFIVSTSGDQHRVRVLGTEFNIQAYGDENIISTTLVTGSVNLEVKNKSGNVSHRTLLPS
EKAICNLDKEEISVMKINTMYETAWMDGKLMFKDTPLPEALKKLSYYYNVEFVIQDAEIKSYCLTGILDNRLLSQTLDYL
RISSNIDYRIEDMKTDDSKGTNRTRVILWKGK

Specific function: Unknown

COG id: COG3712

COG function: function code PT; Fe2+-dicitrate sensor, membrane component

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 40529; Mature: 40529

Theoretical pI: Translated: 8.85; Mature: 8.85

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.9 %Cys     (Translated Protein)
2.8 %Met     (Translated Protein)
3.7 %Cys+Met (Translated Protein)
0.9 %Cys     (Mature Protein)
2.8 %Met     (Mature Protein)
3.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKTENRHINFQEPEGMMLLRYIKDTASNEEKSYIEAWLEADENNKRILLQTARIYYANNA
CCCCCCCEEEECCCCCEEHEEHHHCCCCCHHHHHHHHHHCCCCCCEEEEEEEEEEEECCH
MERIASRNPLIAYEKLEQRLAKRTRLYWLKRFSVAAACIIAIIGLSTLFSHRKVDSEFGD
HHHHHCCCCEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCC
PQIITLQANAGVRTRFNLPDGTVVYLNSGSVLSYPMSYDQKERKVYLSGEAYFKVTHNEK
CEEEEEEECCCEEEEEECCCCEEEEEECCCEEEECCCCCCCCCEEEECCCEEEEEECCCC
QPFIVSTSGDQHRVRVLGTEFNIQAYGDENIISTTLVTGSVNLEVKNKSGNVSHRTLLPS
CCEEEECCCCCEEEEEEEEEEEEEEECCCCEEEEEEEEEEEEEEEECCCCCCEEEEECCC
EKAICNLDKEEISVMKINTMYETAWMDGKLMFKDTPLPEALKKLSYYYNVEFVIQDAEIK
CHHHCCCCHHHEEEEEEEEEEEEEECCCEEEEECCCCHHHHHHHEEEEEEEEEEECCCHH
SYCLTGILDNRLLSQTLDYLRISSNIDYRIEDMKTDDSKGTNRTRVILWKGK
HHHHHHHHHHHHHHHHHHHEEECCCCCEEEEECCCCCCCCCCCEEEEEEECC
>Mature Secondary Structure
MKTENRHINFQEPEGMMLLRYIKDTASNEEKSYIEAWLEADENNKRILLQTARIYYANNA
CCCCCCCEEEECCCCCEEHEEHHHCCCCCHHHHHHHHHHCCCCCCEEEEEEEEEEEECCH
MERIASRNPLIAYEKLEQRLAKRTRLYWLKRFSVAAACIIAIIGLSTLFSHRKVDSEFGD
HHHHHCCCCEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCC
PQIITLQANAGVRTRFNLPDGTVVYLNSGSVLSYPMSYDQKERKVYLSGEAYFKVTHNEK
CEEEEEEECCCEEEEEECCCCEEEEEECCCEEEECCCCCCCCCEEEECCCEEEEEECCCC
QPFIVSTSGDQHRVRVLGTEFNIQAYGDENIISTTLVTGSVNLEVKNKSGNVSHRTLLPS
CCEEEECCCCCEEEEEEEEEEEEEEECCCCEEEEEEEEEEEEEEEECCCCCCEEEEECCC
EKAICNLDKEEISVMKINTMYETAWMDGKLMFKDTPLPEALKKLSYYYNVEFVIQDAEIK
CHHHCCCCHHHEEEEEEEEEEEEEECCCEEEEECCCCHHHHHHHEEEEEEEEEEECCCHH
SYCLTGILDNRLLSQTLDYLRISSNIDYRIEDMKTDDSKGTNRTRVILWKGK
HHHHHHHHHHHHHHHHHHHEEECCCCCEEEEECCCCCCCCCCCEEEEEEECC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA