| Definition | Parabacteroides distasonis ATCC 8503 chromosome, complete genome. |
|---|---|
| Accession | NC_009615 |
| Length | 4,811,379 |
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The map label for this gene is 150009069
Identifier: 150009069
GI number: 150009069
Start: 2907932
End: 2908915
Strand: Reverse
Name: 150009069
Synonym: BDI_2470
Alternate gene names: NA
Gene position: 2908915-2907932 (Counterclockwise)
Preceding gene: 150009070
Following gene: 150009068
Centisome position: 60.46
GC content: 38.82
Gene sequence:
>984_bases ATGCAGGAATCACATACATATTATTTGCTCTCAAAGTACATGGATCATACGATCTCTACGGAAGAGTTGAAAACACTACG GCTTTTGGTTAATTTGTCTGATGATGATGAATTATCGTTGTCATTGTCTCTTTTATGGGAAAATGGGCGACCCTTTGAAG AGGTTGATGAGAGAATCATACGAGATATGTTCAGCGGGATTCAAAATCGAACGAGAAAAGAACGATTCGTTATGGTGTTT AGGAAACTGGCTCGTATCGCCGCAATACTATTAATACCTTTATTAAGTGTATTGTCTGGTTATTTATATTTCAATCCAGT CAATCAGGAGGAGGGTATTGGTAATTTAGTGGTTCATGCCGATAGAGGGGAAAGATCGGGGGTGACTTTACCGGATGGAA CACAAGTAAAACTAAATGCGGAATCGAGCTTAAGTTACACTCACGATTTCGGTCGAGAGCTTCGACAGGTTAATTTAGAG GGAGAGGCCTATTTTGAGGTGACTCGGAATGAGGATAAACCTTTCGTGGTACATACAAAATATCTGGATATAGAAGTGTT GGGCACAAGTTTTAATGTGTATTCGTATGAACGGGAGAATGTCATGGAAATGGCCTTGATATCGGGACGGATCAAGATAC AGACTTGTTCAGAGCCTTCTCGTGTCGTTTATCTAAAACCGAATGAAAAAGCATTGTTCAATAAAGAATCGGGTATTATA ACCGTGGAGAAAACAGATAATCGATTTGAAACGGCATGGTTAAGAGGAGATCTCGTTTTCCGATCAACGACATTAAGTGA TGTCTTGGCTAAACTAGAGCGTAGATATGGCGTGAATATCCATTTGAATGATTCTTCTTTAGCGAATGACTTATTTACCG GAAATTTTGATAGTGAATATATCGTAGAGGTAATGGACCTTTTAGAGAGGCATTATGACTTTACATATGATGTACGAGGA GATGATATCTTTATACATCCTTGA
Upstream 100 bases:
>100_bases ATAAATAAAATTGAAAAAATAATATTCTTATGTTTTATAACATCTAAAAAGACATGTTATAAATTAACGGCTCATGTGTA TACCTTATAAAAAGGGTATT
Downstream 100 bases:
>100_bases GCGAGTGAAAATAAAAATGTACAACCTTAAATCAGTTCTTATGCGACAAGATTCTTCATAATAAAAACGGAACCGAAAAA TGGTCGAGATTTTCCGGTTC
Product: putative anti-sigma factor
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 327; Mature: 327
Protein sequence:
>327_residues MQESHTYYLLSKYMDHTISTEELKTLRLLVNLSDDDELSLSLSLLWENGRPFEEVDERIIRDMFSGIQNRTRKERFVMVF RKLARIAAILLIPLLSVLSGYLYFNPVNQEEGIGNLVVHADRGERSGVTLPDGTQVKLNAESSLSYTHDFGRELRQVNLE GEAYFEVTRNEDKPFVVHTKYLDIEVLGTSFNVYSYERENVMEMALISGRIKIQTCSEPSRVVYLKPNEKALFNKESGII TVEKTDNRFETAWLRGDLVFRSTTLSDVLAKLERRYGVNIHLNDSSLANDLFTGNFDSEYIVEVMDLLERHYDFTYDVRG DDIFIHP
Sequences:
>Translated_327_residues MQESHTYYLLSKYMDHTISTEELKTLRLLVNLSDDDELSLSLSLLWENGRPFEEVDERIIRDMFSGIQNRTRKERFVMVF RKLARIAAILLIPLLSVLSGYLYFNPVNQEEGIGNLVVHADRGERSGVTLPDGTQVKLNAESSLSYTHDFGRELRQVNLE GEAYFEVTRNEDKPFVVHTKYLDIEVLGTSFNVYSYERENVMEMALISGRIKIQTCSEPSRVVYLKPNEKALFNKESGII TVEKTDNRFETAWLRGDLVFRSTTLSDVLAKLERRYGVNIHLNDSSLANDLFTGNFDSEYIVEVMDLLERHYDFTYDVRG DDIFIHP >Mature_327_residues MQESHTYYLLSKYMDHTISTEELKTLRLLVNLSDDDELSLSLSLLWENGRPFEEVDERIIRDMFSGIQNRTRKERFVMVF RKLARIAAILLIPLLSVLSGYLYFNPVNQEEGIGNLVVHADRGERSGVTLPDGTQVKLNAESSLSYTHDFGRELRQVNLE GEAYFEVTRNEDKPFVVHTKYLDIEVLGTSFNVYSYERENVMEMALISGRIKIQTCSEPSRVVYLKPNEKALFNKESGII TVEKTDNRFETAWLRGDLVFRSTTLSDVLAKLERRYGVNIHLNDSSLANDLFTGNFDSEYIVEVMDLLERHYDFTYDVRG DDIFIHP
Specific function: Unknown
COG id: COG3712
COG function: function code PT; Fe2+-dicitrate sensor, membrane component
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 37851; Mature: 37851
Theoretical pI: Translated: 4.77; Mature: 4.77
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.3 %Cys (Translated Protein) 2.1 %Met (Translated Protein) 2.4 %Cys+Met (Translated Protein) 0.3 %Cys (Mature Protein) 2.1 %Met (Mature Protein) 2.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MQESHTYYLLSKYMDHTISTEELKTLRLLVNLSDDDELSLSLSLLWENGRPFEEVDERII CCCCCHHHHHHHHHCCCCCHHHHEEEEEEEECCCCCCEEEEEEEEECCCCCHHHHHHHHH RDMFSGIQNRTRKERFVMVFRKLARIAAILLIPLLSVLSGYLYFNPVNQEEGIGNLVVHA HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCEEEECCCCCCCCCCEEEEEE DRGERSGVTLPDGTQVKLNAESSLSYTHDFGRELRQVNLEGEAYFEVTRNEDKPFVVHTK CCCCCCCCCCCCCCEEEEECCCCCCHHHHHHHHHHEECCCCEEEEEEECCCCCCEEEEEE YLDIEVLGTSFNVYSYERENVMEMALISGRIKIQTCSEPSRVVYLKPNEKALFNKESGII EEEEEEECCEEEEEEECHHHHHHHHHHCCEEEEEECCCCCEEEEECCCCCEEEECCCCEE TVEKTDNRFETAWLRGDLVFRSTTLSDVLAKLERRYGVNIHLNDSSLANDLFTGNFDSEY EEEECCCCEEEEEEECCEEEECCCHHHHHHHHHHHCCCEEEECCCHHHHHHCCCCCCHHH IVEVMDLLERHYDFTYDVRGDDIFIHP HHHHHHHHHHHCCEEEEECCCEEEEEC >Mature Secondary Structure MQESHTYYLLSKYMDHTISTEELKTLRLLVNLSDDDELSLSLSLLWENGRPFEEVDERII CCCCCHHHHHHHHHCCCCCHHHHEEEEEEEECCCCCCEEEEEEEEECCCCCHHHHHHHHH RDMFSGIQNRTRKERFVMVFRKLARIAAILLIPLLSVLSGYLYFNPVNQEEGIGNLVVHA HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCEEEECCCCCCCCCCEEEEEE DRGERSGVTLPDGTQVKLNAESSLSYTHDFGRELRQVNLEGEAYFEVTRNEDKPFVVHTK CCCCCCCCCCCCCCEEEEECCCCCCHHHHHHHHHHEECCCCEEEEEEECCCCCCEEEEEE YLDIEVLGTSFNVYSYERENVMEMALISGRIKIQTCSEPSRVVYLKPNEKALFNKESGII EEEEEEECCEEEEEEECHHHHHHHHHHCCEEEEEECCCCCEEEEECCCCCEEEECCCCEE TVEKTDNRFETAWLRGDLVFRSTTLSDVLAKLERRYGVNIHLNDSSLANDLFTGNFDSEY EEEECCCCEEEEEEECCEEEECCCHHHHHHHHHHHCCCEEEECCCHHHHHHCCCCCCHHH IVEVMDLLERHYDFTYDVRGDDIFIHP HHHHHHHHHHHCCEEEEECCCEEEEEC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA