| Definition | Parabacteroides distasonis ATCC 8503 chromosome, complete genome. |
|---|---|
| Accession | NC_009615 |
| Length | 4,811,379 |
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The map label for this gene is 150009067
Identifier: 150009067
GI number: 150009067
Start: 2902871
End: 2904460
Strand: Reverse
Name: 150009067
Synonym: BDI_2468
Alternate gene names: NA
Gene position: 2904460-2902871 (Counterclockwise)
Preceding gene: 150009068
Following gene: 150009066
Centisome position: 60.37
GC content: 42.96
Gene sequence:
>1590_bases ATGAAGAAATTAGTTATATTATTAGCTGCTGCGTTAACTTTTAATAGTTGTTCGGATAGTTTTCTGGATTTATCAAATCC CAGTGCGTTATCTCCAAGTGTCTACCCTAAATCTATGGCGGATATGGAGACTATCGTAACTTCAGTTTATGCGAATATGG TCGCTGTGCCTTTGTATGGAAAAAGGGTTATGGCGAAAGGGACATTCTGTGTGGATCATACGGTAGATATGGCTTGGACT GGTGACGCCAACTGGAACCAGTTGGCGACCAATCAAGTGACTTCTGATAATGCTTACATTGGGACGTTATGGATTGGTTA TTATAAAATGATTTCTTGTGCGAATACCGTATTGGAGCAATTGGAAAGAATCGACAAGGAGAAGTTTACGGATGCGGATT TAGCAAGACTTTCGCAGATGAAGGGAGAAGCTTTGTTTTGGAGAGGTTGGGCACACCAACAGTTAGTAGCGTTTTTTGGG GAGGGATATCCTTGCAACGGGGATGGCGATAAAAAAGGTGTACCTGTTCGTTTACAGGTAGCATCGACTCCGGATATGCT AAATATAGAACGTAGCACGGTGGCCGAGGTTTACGATCAGATCTTGAAAGATTATGAGGCAGCCAAACTTTTGCTACCTG CCGTATGGGAAGAGCGGGCGGACTATCCACGTCCAACCTCTGTTGCCGTTGCTAGTTACATCGGGCAAGCGAATTTGTAT ATGGGTAATTATGATGCGGCAAAGAAAGCGTTGAAAGAGGTTATTGATTCTTCCGGAAAAGAATTGCTCCCTTTCAATGA ATATGCGAAGATGTTTAATGAGGATCAGGAGAAATTTAATAGAGAATCGATCTTAGAGATTAATTTCCGTAATGGGGATA CTTCCGGATATTTTTGGTATGGAGAAGGTTCTCAATATGGATTGATCGCTGCCTTATGTTTCCAGAACGCAAGTGGAGAT GTTGAGGCGGCCGGTTGGGGTAATATTTTCTTTCATGATGCGAATATTAAACGTTTTAATGGAGATCCTCGTCTGGATAT CGCCGCTTTGCGTCCGGGAACTCCTGTTATTATGAATGGACAGCAGACGCAGGTTCTGAAATATAAGGATACGGAGGCTG ACATTCAAGGTTGGAGCATGCGAAAATACAATCCGTTGAAAAGTACGGTGAATGAGTTGAATTTAGGGGTTGGTATTAAT ATGTATTTGATGCGTTTGGCGGATGTATATTTGATGTATGCGGAAGCTTGTCAGGCTACGGGAGATGAGGTAAATGCCCG GAACTATATGAATCTGGTAAGAAGAAGAGCTTATAATGGAGATAGTTCCCATGATATAACGGCTAGTGGAGAAGCTTTGA GAGATGCGATTCGGGAGGAACGTTTCATGGAGTTCTGCGGTGAGGGCGTACAACATTGGCAAGATGTTTGCCGCTGGAAG GTCTTGGATGAGGAGATTAGCCGTTGGTATGGAAAGACACGTGTTGGTAATCCGCATTATGATGCGAAAGATTTGTATTT CCCGATACCCAAGGTTGAAATGGAGAATAATCCGAATATGACACAAAGCATAGGTTACGAGAACGAGTAG
Upstream 100 bases:
>100_bases TGGTGGATATTTGGAACGAAATATGTATTCTGTGAAACGGGCTCCCTCCACCCGCACCATTATGGGCGGTTTAAGTTTAA CCCTCTAAATTAATAGGAAG
Downstream 100 bases:
>100_bases ATATAACTTGTTGAAAAGTTCATCAAAGAAAAGGAATAGGATAGTTCTCTTGGGATCGCTAATCCTATTCTTTTTTTATT CCTTTATGATCATATTAAAT
Product: hypothetical protein
Products: NA
Alternate protein names: RagB/SusD Domain-Containing Protein; Outer Membrane Protein; Ragb/Susd Domain Protein; SusD/RagB Family Protein; Ragb/Susd DomaiN-Containing Protein; Tetratricopeptide Domain Protein; Lipoprotein
Number of amino acids: Translated: 529; Mature: 529
Protein sequence:
>529_residues MKKLVILLAAALTFNSCSDSFLDLSNPSALSPSVYPKSMADMETIVTSVYANMVAVPLYGKRVMAKGTFCVDHTVDMAWT GDANWNQLATNQVTSDNAYIGTLWIGYYKMISCANTVLEQLERIDKEKFTDADLARLSQMKGEALFWRGWAHQQLVAFFG EGYPCNGDGDKKGVPVRLQVASTPDMLNIERSTVAEVYDQILKDYEAAKLLLPAVWEERADYPRPTSVAVASYIGQANLY MGNYDAAKKALKEVIDSSGKELLPFNEYAKMFNEDQEKFNRESILEINFRNGDTSGYFWYGEGSQYGLIAALCFQNASGD VEAAGWGNIFFHDANIKRFNGDPRLDIAALRPGTPVIMNGQQTQVLKYKDTEADIQGWSMRKYNPLKSTVNELNLGVGIN MYLMRLADVYLMYAEACQATGDEVNARNYMNLVRRRAYNGDSSHDITASGEALRDAIREERFMEFCGEGVQHWQDVCRWK VLDEEISRWYGKTRVGNPHYDAKDLYFPIPKVEMENNPNMTQSIGYENE
Sequences:
>Translated_529_residues MKKLVILLAAALTFNSCSDSFLDLSNPSALSPSVYPKSMADMETIVTSVYANMVAVPLYGKRVMAKGTFCVDHTVDMAWT GDANWNQLATNQVTSDNAYIGTLWIGYYKMISCANTVLEQLERIDKEKFTDADLARLSQMKGEALFWRGWAHQQLVAFFG EGYPCNGDGDKKGVPVRLQVASTPDMLNIERSTVAEVYDQILKDYEAAKLLLPAVWEERADYPRPTSVAVASYIGQANLY MGNYDAAKKALKEVIDSSGKELLPFNEYAKMFNEDQEKFNRESILEINFRNGDTSGYFWYGEGSQYGLIAALCFQNASGD VEAAGWGNIFFHDANIKRFNGDPRLDIAALRPGTPVIMNGQQTQVLKYKDTEADIQGWSMRKYNPLKSTVNELNLGVGIN MYLMRLADVYLMYAEACQATGDEVNARNYMNLVRRRAYNGDSSHDITASGEALRDAIREERFMEFCGEGVQHWQDVCRWK VLDEEISRWYGKTRVGNPHYDAKDLYFPIPKVEMENNPNMTQSIGYENE >Mature_529_residues MKKLVILLAAALTFNSCSDSFLDLSNPSALSPSVYPKSMADMETIVTSVYANMVAVPLYGKRVMAKGTFCVDHTVDMAWT GDANWNQLATNQVTSDNAYIGTLWIGYYKMISCANTVLEQLERIDKEKFTDADLARLSQMKGEALFWRGWAHQQLVAFFG EGYPCNGDGDKKGVPVRLQVASTPDMLNIERSTVAEVYDQILKDYEAAKLLLPAVWEERADYPRPTSVAVASYIGQANLY MGNYDAAKKALKEVIDSSGKELLPFNEYAKMFNEDQEKFNRESILEINFRNGDTSGYFWYGEGSQYGLIAALCFQNASGD VEAAGWGNIFFHDANIKRFNGDPRLDIAALRPGTPVIMNGQQTQVLKYKDTEADIQGWSMRKYNPLKSTVNELNLGVGIN MYLMRLADVYLMYAEACQATGDEVNARNYMNLVRRRAYNGDSSHDITASGEALRDAIREERFMEFCGEGVQHWQDVCRWK VLDEEISRWYGKTRVGNPHYDAKDLYFPIPKVEMENNPNMTQSIGYENE
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 59687; Mature: 59687
Theoretical pI: Translated: 4.74; Mature: 4.74
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.5 %Cys (Translated Protein) 3.8 %Met (Translated Protein) 5.3 %Cys+Met (Translated Protein) 1.5 %Cys (Mature Protein) 3.8 %Met (Mature Protein) 5.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKKLVILLAAALTFNSCSDSFLDLSNPSALSPSVYPKSMADMETIVTSVYANMVAVPLYG CCHHHHHHHHHHHHCCCCCCCEECCCCCCCCCCCCCHHHHHHHHHHHHHHHHHEEECCCC KRVMAKGTFCVDHTVDMAWTGDANWNQLATNQVTSDNAYIGTLWIGYYKMISCANTVLEQ CEEEECCCEEEECCEEEEECCCCCCCHHHCCCCCCCCCEEEHHHHHHHHHHHHHHHHHHH LERIDKEKFTDADLARLSQMKGEALFWRGWAHQQLVAFFGEGYPCNGDGDKKGVPVRLQV HHHHHHHHCCHHHHHHHHHHCCCEEEEECCHHHHHHHHHCCCCCCCCCCCCCCCCEEEEE ASTPDMLNIERSTVAEVYDQILKDYEAAKLLLPAVWEERADYPRPTSVAVASYIGQANLY CCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHCCCCEE MGNYDAAKKALKEVIDSSGKELLPFNEYAKMFNEDQEKFNRESILEINFRNGDTSGYFWY ECCHHHHHHHHHHHHHCCCCCCCCHHHHHHHHCHHHHHCCCCCEEEEEECCCCCCEEEEE GEGSQYGLIAALCFQNASGDVEAAGWGNIFFHDANIKRFNGDPRLDIAALRPGTPVIMNG CCCCCCHHHHHHHHCCCCCCEEECCCCCEEEECCCCEEECCCCCEEEEEECCCCCEEECC QQTQVLKYKDTEADIQGWSMRKYNPLKSTVNELNLGVGINMYLMRLADVYLMYAEACQAT CCEEEEEEECCCCCCCCCCCCCCCHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHCC GDEVNARNYMNLVRRRAYNGDSSHDITASGEALRDAIREERFMEFCGEGVQHWQDVCRWK CCCCCHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH VLDEEISRWYGKTRVGNPHYDAKDLYFPIPKVEMENNPNMTQSIGYENE HHHHHHHHHHCCCCCCCCCCCCCCEEECCCCEEECCCCCHHHCCCCCCC >Mature Secondary Structure MKKLVILLAAALTFNSCSDSFLDLSNPSALSPSVYPKSMADMETIVTSVYANMVAVPLYG CCHHHHHHHHHHHHCCCCCCCEECCCCCCCCCCCCCHHHHHHHHHHHHHHHHHEEECCCC KRVMAKGTFCVDHTVDMAWTGDANWNQLATNQVTSDNAYIGTLWIGYYKMISCANTVLEQ CEEEECCCEEEECCEEEEECCCCCCCHHHCCCCCCCCCEEEHHHHHHHHHHHHHHHHHHH LERIDKEKFTDADLARLSQMKGEALFWRGWAHQQLVAFFGEGYPCNGDGDKKGVPVRLQV HHHHHHHHCCHHHHHHHHHHCCCEEEEECCHHHHHHHHHCCCCCCCCCCCCCCCCEEEEE ASTPDMLNIERSTVAEVYDQILKDYEAAKLLLPAVWEERADYPRPTSVAVASYIGQANLY CCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHCCCCEE MGNYDAAKKALKEVIDSSGKELLPFNEYAKMFNEDQEKFNRESILEINFRNGDTSGYFWY ECCHHHHHHHHHHHHHCCCCCCCCHHHHHHHHCHHHHHCCCCCEEEEEECCCCCCEEEEE GEGSQYGLIAALCFQNASGDVEAAGWGNIFFHDANIKRFNGDPRLDIAALRPGTPVIMNG CCCCCCHHHHHHHHCCCCCCEEECCCCCEEEECCCCEEECCCCCEEEEEECCCCCEEECC QQTQVLKYKDTEADIQGWSMRKYNPLKSTVNELNLGVGINMYLMRLADVYLMYAEACQAT CCEEEEEEECCCCCCCCCCCCCCCHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHCC GDEVNARNYMNLVRRRAYNGDSSHDITASGEALRDAIREERFMEFCGEGVQHWQDVCRWK CCCCCHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH VLDEEISRWYGKTRVGNPHYDAKDLYFPIPKVEMENNPNMTQSIGYENE HHHHHHHHHHCCCCCCCCCCCCCCEEECCCCEEECCCCCHHHCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA