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The map label for this gene is rpmC

Identifier: 150008976

GI number: 150008976

Start: 2785552

End: 2785749

Strand: Reverse

Name: rpmC

Synonym: BDI_2372

Alternate gene names: 150008976

Gene position: 2785749-2785552 (Counterclockwise)

Preceding gene: 150008977

Following gene: 150008975

Centisome position: 57.9

GC content: 40.91

Gene sequence:

>198_bases
ATGAAGATTGCAGAAATTAGAGAACTAAGCACGAAAGAGTTGCTAGAGAGAGTAGATGCAGAGGTTGCGGCCTATGATCA
GAAGAAGATTAACCATAGCATCTCGCCTATGGATAATCCTTCTCAGATTAAACAGCAACGCAGATTGATTGCGCGCATGA
AAACAGAATTGCGCCAGAGAGAACTTAACAACAAATAA

Upstream 100 bases:

>100_bases
CTAAGGAAGCGTTGCGCCTTGCCGCACAAAAACTTCCGGTTACAACCAAGTTTGTTGTGAGACGTGATTATGACATGCAA
AATCAAAATGCGTAATTGTT

Downstream 100 bases:

>100_bases
TTGAGCCTGATGGAAACTAGAAATTTAAGAAAAGAAAGAACGGGCGTGGTAACGAGCAACAAGATGGATAAAAGCATCAC
GGTTGCCATTAAATGGAAGG

Product: 50S ribosomal protein L29

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 65; Mature: 65

Protein sequence:

>65_residues
MKIAEIRELSTKELLERVDAEVAAYDQKKINHSISPMDNPSQIKQQRRLIARMKTELRQRELNNK

Sequences:

>Translated_65_residues
MKIAEIRELSTKELLERVDAEVAAYDQKKINHSISPMDNPSQIKQQRRLIARMKTELRQRELNNK
>Mature_65_residues
MKIAEIRELSTKELLERVDAEVAAYDQKKINHSISPMDNPSQIKQQRRLIARMKTELRQRELNNK

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the ribosomal protein L29P family

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): RL29_PARD8 (A6LEI3)

Other databases:

- EMBL:   CP000140
- RefSeq:   YP_001303719.1
- ProteinModelPortal:   A6LEI3
- SMR:   A6LEI3
- STRING:   A6LEI3
- GeneID:   5307521
- GenomeReviews:   CP000140_GR
- KEGG:   pdi:BDI_2372
- eggNOG:   NOG76998
- HOGENOM:   HBG730819
- OMA:   ANYNQMV
- ProtClustDB:   PRK00306
- BioCyc:   PDIS435591:BDI_2372-MONOMER
- GO:   GO:0005840
- GO:   GO:0006412
- HAMAP:   MF_00374_B
- InterPro:   IPR001854
- Gene3D:   G3DSA:1.10.287.310
- TIGRFAMs:   TIGR00012

Pfam domain/function: PF00831 Ribosomal_L29; SSF46561 Ribosomal_L29

EC number: NA

Molecular weight: Translated: 7705; Mature: 7705

Theoretical pI: Translated: 10.47; Mature: 10.47

Prosite motif: PS00579 RIBOSOMAL_L29

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
4.6 %Met     (Translated Protein)
4.6 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
4.6 %Met     (Mature Protein)
4.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKIAEIRELSTKELLERVDAEVAAYDQKKINHSISPMDNPSQIKQQRRLIARMKTELRQR
CCCHHHHHCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHH
ELNNK
HCCCC
>Mature Secondary Structure
MKIAEIRELSTKELLERVDAEVAAYDQKKINHSISPMDNPSQIKQQRRLIARMKTELRQR
CCCHHHHHCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHH
ELNNK
HCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA