Definition Parabacteroides distasonis ATCC 8503 chromosome, complete genome.
Accession NC_009615
Length 4,811,379

Click here to switch to the map view.

The map label for this gene is 150008937

Identifier: 150008937

GI number: 150008937

Start: 2746694

End: 2748325

Strand: Reverse

Name: 150008937

Synonym: BDI_2333

Alternate gene names: NA

Gene position: 2748325-2746694 (Counterclockwise)

Preceding gene: 150008938

Following gene: 150008936

Centisome position: 57.12

GC content: 41.67

Gene sequence:

>1632_bases
ATGAAAAAGATATTTTATTTTGCGGCATCAGCGTTGATGATGTGTTCTTGTGCGGACTCATTCCTTTCTGAGGAGCCTGT
GGGTGAGTTCTTGCCCGGACAGGTAGAGAGTGAGGAAAATATAGAGGGTATCGTGACCGGTGCATATGCTGTGTTGGATG
GGTATTATGCCTCTGATGCGATTAATTCCGGTTGCTCAAACTGGCAGTTCGGGGATGTTGTCTCTGACGATGCGTATAAA
GGTGGCGGCGGTACCGGTGACCAGAACCAAATCCATTTGATGGAGATCTTTAATGCGAATCCCACAGGGATTGACTTTGA
AGCTCGATGGGCTGCTCTTTATGAGGGAATAAAACGTTGTAACCAAGCGATTCGTTTATTGAATGGTAGTGAGGTTAAAA
ACAAGGAACAGCGTTTAGCTGAGATGCGCTTTTTGAGGGGGCATTATTATTTCAACTTAAAAATCATTTATAATCAGATT
CCTTGGATCGATGAAACGTTGGTGGATCCAAATGAATACAATAAGAAATCGAATATCGAGTTTTCATCCGATCAATTGTG
GGAGAAGATTTTAGAAGAGTTCTCTGCTGCTTATAAAGTATTGCCGGAGAGCCAAGCGGATTATGGCCGGCCTACTAAAA
TGGCAGCTAGAGCTTATATGGCAAAGGTTTATTTATATCAGTCCAAGTGGAAAGAATGTTTGGAAGCTTGTGATGAGGTG
ATTCAATCTGGAAAATATGAGCTATTCCCTGATTTCCGGAATGTGTTCTTGCCTGAAAATGATAATTGCTCGGAGATTAT
CTTTGCGATCCAGCTGTCCATTAATGATGGTTCTCCCAATAATGAGAACGGAAGTTATGGCGATCGCTTGTTGCCTCCGG
GAGGTCCTTATCCTGTATATGGCTTTTTGCGGCCGACTCAAAATTTGGTAAATGCTTATAAAACGGATGTTAAAGGCTTG
CCTTATAATGATGGTAAAGATGTGTCAGAGAATGACTATGTAGATGTTCGTTTGGATCATACATTAGCTAGACCAAATAT
ACCGTTTATGGATGTACAATTGTATGATTGGACTCCTAGAGAGGCTAGTGTGTATGGCCCGTATAGCCCGAAGAAGCGTT
TGGTTTCATTGAATTCTACTTATTATTCGCCGATATGGCCTTATGTGAATGCTTTGAATTTCTATGTGATTCGTTATGCG
GATTTGTTATTGTGGAGAGCTGAGGCTGCTATTGAGACAGGTGATTTAGAGACTGGGCGTAAGTATATCAATATGATTAG
GGAGCGTGCGAAAAATACTCAGCATGTCAAGACAATGGATCAATCACAAGATGCTGCTAATTATAAGGTAGGGGTTTATG
ATGAGCCTTTTAAATCAAAAAATGAAGCCGTGCAAGCGTTACGTATGGAGAGACGTTTGGAGATGGCGCATGAGGGAATT
CGTTTCTTTGATTTGGTGCGTTGGGGTGTCGCGGATGAAGTTATCAACGCTTATATCGCCAAAGAGAAAGTGTTCCGTTC
CCACTTGCAAAATGCTCATTTCGTAAAAGGTAAGCATGAGTATTTCCCGATACCTCAGTCTATGATTGATATTTGTGGTA
CGGAAGTAATGAAACAGAATCCGGGTTATTGA

Upstream 100 bases:

>100_bases
GTAATTTGGATATGGGGGTGGATCGTGGAGTGTATCCATTACCAAGAACATTTACTTTAGGGGTTAACGTTAGTCTTTAA
CATAAAAAGAGATATATACA

Downstream 100 bases:

>100_bases
TAAATTAAATGAAAGAAAAGGCGGTGTGTCAAATAGTTTAATATCCATTTGATGCACCGCTTTTTCACGATGTAATAAAA
AATATGAAGCAGCTAGGAGT

Product: hypothetical protein

Products: NA

Alternate protein names: Outer Membrane Protein; Ragb/Susd Domain Protein; RagB/SusD Domain-Containing Protein; SusD/RagB Family Protein; Lipoprotein; RagB/SusD Family Protein; Liporotein; SusD Family Protein

Number of amino acids: Translated: 543; Mature: 543

Protein sequence:

>543_residues
MKKIFYFAASALMMCSCADSFLSEEPVGEFLPGQVESEENIEGIVTGAYAVLDGYYASDAINSGCSNWQFGDVVSDDAYK
GGGGTGDQNQIHLMEIFNANPTGIDFEARWAALYEGIKRCNQAIRLLNGSEVKNKEQRLAEMRFLRGHYYFNLKIIYNQI
PWIDETLVDPNEYNKKSNIEFSSDQLWEKILEEFSAAYKVLPESQADYGRPTKMAARAYMAKVYLYQSKWKECLEACDEV
IQSGKYELFPDFRNVFLPENDNCSEIIFAIQLSINDGSPNNENGSYGDRLLPPGGPYPVYGFLRPTQNLVNAYKTDVKGL
PYNDGKDVSENDYVDVRLDHTLARPNIPFMDVQLYDWTPREASVYGPYSPKKRLVSLNSTYYSPIWPYVNALNFYVIRYA
DLLLWRAEAAIETGDLETGRKYINMIRERAKNTQHVKTMDQSQDAANYKVGVYDEPFKSKNEAVQALRMERRLEMAHEGI
RFFDLVRWGVADEVINAYIAKEKVFRSHLQNAHFVKGKHEYFPIPQSMIDICGTEVMKQNPGY

Sequences:

>Translated_543_residues
MKKIFYFAASALMMCSCADSFLSEEPVGEFLPGQVESEENIEGIVTGAYAVLDGYYASDAINSGCSNWQFGDVVSDDAYK
GGGGTGDQNQIHLMEIFNANPTGIDFEARWAALYEGIKRCNQAIRLLNGSEVKNKEQRLAEMRFLRGHYYFNLKIIYNQI
PWIDETLVDPNEYNKKSNIEFSSDQLWEKILEEFSAAYKVLPESQADYGRPTKMAARAYMAKVYLYQSKWKECLEACDEV
IQSGKYELFPDFRNVFLPENDNCSEIIFAIQLSINDGSPNNENGSYGDRLLPPGGPYPVYGFLRPTQNLVNAYKTDVKGL
PYNDGKDVSENDYVDVRLDHTLARPNIPFMDVQLYDWTPREASVYGPYSPKKRLVSLNSTYYSPIWPYVNALNFYVIRYA
DLLLWRAEAAIETGDLETGRKYINMIRERAKNTQHVKTMDQSQDAANYKVGVYDEPFKSKNEAVQALRMERRLEMAHEGI
RFFDLVRWGVADEVINAYIAKEKVFRSHLQNAHFVKGKHEYFPIPQSMIDICGTEVMKQNPGY
>Mature_543_residues
MKKIFYFAASALMMCSCADSFLSEEPVGEFLPGQVESEENIEGIVTGAYAVLDGYYASDAINSGCSNWQFGDVVSDDAYK
GGGGTGDQNQIHLMEIFNANPTGIDFEARWAALYEGIKRCNQAIRLLNGSEVKNKEQRLAEMRFLRGHYYFNLKIIYNQI
PWIDETLVDPNEYNKKSNIEFSSDQLWEKILEEFSAAYKVLPESQADYGRPTKMAARAYMAKVYLYQSKWKECLEACDEV
IQSGKYELFPDFRNVFLPENDNCSEIIFAIQLSINDGSPNNENGSYGDRLLPPGGPYPVYGFLRPTQNLVNAYKTDVKGL
PYNDGKDVSENDYVDVRLDHTLARPNIPFMDVQLYDWTPREASVYGPYSPKKRLVSLNSTYYSPIWPYVNALNFYVIRYA
DLLLWRAEAAIETGDLETGRKYINMIRERAKNTQHVKTMDQSQDAANYKVGVYDEPFKSKNEAVQALRMERRLEMAHEGI
RFFDLVRWGVADEVINAYIAKEKVFRSHLQNAHFVKGKHEYFPIPQSMIDICGTEVMKQNPGY

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 62168; Mature: 62168

Theoretical pI: Translated: 4.88; Mature: 4.88

Prosite motif: PS00013 PROKAR_LIPOPROTEIN

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.5 %Cys     (Translated Protein)
2.6 %Met     (Translated Protein)
4.1 %Cys+Met (Translated Protein)
1.5 %Cys     (Mature Protein)
2.6 %Met     (Mature Protein)
4.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKKIFYFAASALMMCSCADSFLSEEPVGEFLPGQVESEENIEGIVTGAYAVLDGYYASDA
CCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCHHEEHHHHHHHCHHHHHH
INSGCSNWQFGDVVSDDAYKGGGGTGDQNQIHLMEIFNANPTGIDFEARWAALYEGIKRC
HHCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEEEECCCCCCCCHHHHHHHHHHHHHHH
NQAIRLLNGSEVKNKEQRLAEMRFLRGHYYFNLKIIYNQIPWIDETLVDPNEYNKKSNIE
HHHHHHHCCCCCCHHHHHHHHHHHHHCEEEEEEEEEEECCCCCHHHCCCCHHCCCCCCCC
FSSDQLWEKILEEFSAAYKVLPESQADYGRPTKMAARAYMAKVYLYQSKWKECLEACDEV
CCHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
IQSGKYELFPDFRNVFLPENDNCSEIIFAIQLSINDGSPNNENGSYGDRLLPPGGPYPVY
HHCCCEEECCCHHHEECCCCCCCCEEEEEEEEEECCCCCCCCCCCCCCCCCCCCCCCCEE
GFLRPTQNLVNAYKTDVKGLPYNDGKDVSENDYVDVRLDHTLARPNIPFMDVQLYDWTPR
EEECHHHHHHHHHHHCCCCCCCCCCCCCCCCCEEEEEECCEECCCCCCEEEEEEECCCCC
EASVYGPYSPKKRLVSLNSTYYSPIWPYVNALNFYVIRYADLLLWRAEAAIETGDLETGR
CCCEECCCCCHHHEEEECCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHH
KYINMIRERAKNTQHVKTMDQSQDAANYKVGVYDEPFKSKNEAVQALRMERRLEMAHEGI
HHHHHHHHHHCCCHHHHHHHCCCCCCCCEECCCCCCCCCHHHHHHHHHHHHHHHHHHCCH
RFFDLVRWGVADEVINAYIAKEKVFRSHLQNAHFVKGKHEYFPIPQSMIDICGTEVMKQN
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEECCCCCCCCCCHHHHHHHHHHHHHCC
PGY
CCC
>Mature Secondary Structure
MKKIFYFAASALMMCSCADSFLSEEPVGEFLPGQVESEENIEGIVTGAYAVLDGYYASDA
CCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCHHEEHHHHHHHCHHHHHH
INSGCSNWQFGDVVSDDAYKGGGGTGDQNQIHLMEIFNANPTGIDFEARWAALYEGIKRC
HHCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEEEECCCCCCCCHHHHHHHHHHHHHHH
NQAIRLLNGSEVKNKEQRLAEMRFLRGHYYFNLKIIYNQIPWIDETLVDPNEYNKKSNIE
HHHHHHHCCCCCCHHHHHHHHHHHHHCEEEEEEEEEEECCCCCHHHCCCCHHCCCCCCCC
FSSDQLWEKILEEFSAAYKVLPESQADYGRPTKMAARAYMAKVYLYQSKWKECLEACDEV
CCHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
IQSGKYELFPDFRNVFLPENDNCSEIIFAIQLSINDGSPNNENGSYGDRLLPPGGPYPVY
HHCCCEEECCCHHHEECCCCCCCCEEEEEEEEEECCCCCCCCCCCCCCCCCCCCCCCCEE
GFLRPTQNLVNAYKTDVKGLPYNDGKDVSENDYVDVRLDHTLARPNIPFMDVQLYDWTPR
EEECHHHHHHHHHHHCCCCCCCCCCCCCCCCCEEEEEECCEECCCCCCEEEEEEECCCCC
EASVYGPYSPKKRLVSLNSTYYSPIWPYVNALNFYVIRYADLLLWRAEAAIETGDLETGR
CCCEECCCCCHHHEEEECCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHH
KYINMIRERAKNTQHVKTMDQSQDAANYKVGVYDEPFKSKNEAVQALRMERRLEMAHEGI
HHHHHHHHHHCCCHHHHHHHCCCCCCCCEECCCCCCCCCHHHHHHHHHHHHHHHHHHCCH
RFFDLVRWGVADEVINAYIAKEKVFRSHLQNAHFVKGKHEYFPIPQSMIDICGTEVMKQN
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEECCCCCCCCCCHHHHHHHHHHHHHCC
PGY
CCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA