| Definition | Parabacteroides distasonis ATCC 8503 chromosome, complete genome. |
|---|---|
| Accession | NC_009615 |
| Length | 4,811,379 |
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The map label for this gene is 150008937
Identifier: 150008937
GI number: 150008937
Start: 2746694
End: 2748325
Strand: Reverse
Name: 150008937
Synonym: BDI_2333
Alternate gene names: NA
Gene position: 2748325-2746694 (Counterclockwise)
Preceding gene: 150008938
Following gene: 150008936
Centisome position: 57.12
GC content: 41.67
Gene sequence:
>1632_bases ATGAAAAAGATATTTTATTTTGCGGCATCAGCGTTGATGATGTGTTCTTGTGCGGACTCATTCCTTTCTGAGGAGCCTGT GGGTGAGTTCTTGCCCGGACAGGTAGAGAGTGAGGAAAATATAGAGGGTATCGTGACCGGTGCATATGCTGTGTTGGATG GGTATTATGCCTCTGATGCGATTAATTCCGGTTGCTCAAACTGGCAGTTCGGGGATGTTGTCTCTGACGATGCGTATAAA GGTGGCGGCGGTACCGGTGACCAGAACCAAATCCATTTGATGGAGATCTTTAATGCGAATCCCACAGGGATTGACTTTGA AGCTCGATGGGCTGCTCTTTATGAGGGAATAAAACGTTGTAACCAAGCGATTCGTTTATTGAATGGTAGTGAGGTTAAAA ACAAGGAACAGCGTTTAGCTGAGATGCGCTTTTTGAGGGGGCATTATTATTTCAACTTAAAAATCATTTATAATCAGATT CCTTGGATCGATGAAACGTTGGTGGATCCAAATGAATACAATAAGAAATCGAATATCGAGTTTTCATCCGATCAATTGTG GGAGAAGATTTTAGAAGAGTTCTCTGCTGCTTATAAAGTATTGCCGGAGAGCCAAGCGGATTATGGCCGGCCTACTAAAA TGGCAGCTAGAGCTTATATGGCAAAGGTTTATTTATATCAGTCCAAGTGGAAAGAATGTTTGGAAGCTTGTGATGAGGTG ATTCAATCTGGAAAATATGAGCTATTCCCTGATTTCCGGAATGTGTTCTTGCCTGAAAATGATAATTGCTCGGAGATTAT CTTTGCGATCCAGCTGTCCATTAATGATGGTTCTCCCAATAATGAGAACGGAAGTTATGGCGATCGCTTGTTGCCTCCGG GAGGTCCTTATCCTGTATATGGCTTTTTGCGGCCGACTCAAAATTTGGTAAATGCTTATAAAACGGATGTTAAAGGCTTG CCTTATAATGATGGTAAAGATGTGTCAGAGAATGACTATGTAGATGTTCGTTTGGATCATACATTAGCTAGACCAAATAT ACCGTTTATGGATGTACAATTGTATGATTGGACTCCTAGAGAGGCTAGTGTGTATGGCCCGTATAGCCCGAAGAAGCGTT TGGTTTCATTGAATTCTACTTATTATTCGCCGATATGGCCTTATGTGAATGCTTTGAATTTCTATGTGATTCGTTATGCG GATTTGTTATTGTGGAGAGCTGAGGCTGCTATTGAGACAGGTGATTTAGAGACTGGGCGTAAGTATATCAATATGATTAG GGAGCGTGCGAAAAATACTCAGCATGTCAAGACAATGGATCAATCACAAGATGCTGCTAATTATAAGGTAGGGGTTTATG ATGAGCCTTTTAAATCAAAAAATGAAGCCGTGCAAGCGTTACGTATGGAGAGACGTTTGGAGATGGCGCATGAGGGAATT CGTTTCTTTGATTTGGTGCGTTGGGGTGTCGCGGATGAAGTTATCAACGCTTATATCGCCAAAGAGAAAGTGTTCCGTTC CCACTTGCAAAATGCTCATTTCGTAAAAGGTAAGCATGAGTATTTCCCGATACCTCAGTCTATGATTGATATTTGTGGTA CGGAAGTAATGAAACAGAATCCGGGTTATTGA
Upstream 100 bases:
>100_bases GTAATTTGGATATGGGGGTGGATCGTGGAGTGTATCCATTACCAAGAACATTTACTTTAGGGGTTAACGTTAGTCTTTAA CATAAAAAGAGATATATACA
Downstream 100 bases:
>100_bases TAAATTAAATGAAAGAAAAGGCGGTGTGTCAAATAGTTTAATATCCATTTGATGCACCGCTTTTTCACGATGTAATAAAA AATATGAAGCAGCTAGGAGT
Product: hypothetical protein
Products: NA
Alternate protein names: Outer Membrane Protein; Ragb/Susd Domain Protein; RagB/SusD Domain-Containing Protein; SusD/RagB Family Protein; Lipoprotein; RagB/SusD Family Protein; Liporotein; SusD Family Protein
Number of amino acids: Translated: 543; Mature: 543
Protein sequence:
>543_residues MKKIFYFAASALMMCSCADSFLSEEPVGEFLPGQVESEENIEGIVTGAYAVLDGYYASDAINSGCSNWQFGDVVSDDAYK GGGGTGDQNQIHLMEIFNANPTGIDFEARWAALYEGIKRCNQAIRLLNGSEVKNKEQRLAEMRFLRGHYYFNLKIIYNQI PWIDETLVDPNEYNKKSNIEFSSDQLWEKILEEFSAAYKVLPESQADYGRPTKMAARAYMAKVYLYQSKWKECLEACDEV IQSGKYELFPDFRNVFLPENDNCSEIIFAIQLSINDGSPNNENGSYGDRLLPPGGPYPVYGFLRPTQNLVNAYKTDVKGL PYNDGKDVSENDYVDVRLDHTLARPNIPFMDVQLYDWTPREASVYGPYSPKKRLVSLNSTYYSPIWPYVNALNFYVIRYA DLLLWRAEAAIETGDLETGRKYINMIRERAKNTQHVKTMDQSQDAANYKVGVYDEPFKSKNEAVQALRMERRLEMAHEGI RFFDLVRWGVADEVINAYIAKEKVFRSHLQNAHFVKGKHEYFPIPQSMIDICGTEVMKQNPGY
Sequences:
>Translated_543_residues MKKIFYFAASALMMCSCADSFLSEEPVGEFLPGQVESEENIEGIVTGAYAVLDGYYASDAINSGCSNWQFGDVVSDDAYK GGGGTGDQNQIHLMEIFNANPTGIDFEARWAALYEGIKRCNQAIRLLNGSEVKNKEQRLAEMRFLRGHYYFNLKIIYNQI PWIDETLVDPNEYNKKSNIEFSSDQLWEKILEEFSAAYKVLPESQADYGRPTKMAARAYMAKVYLYQSKWKECLEACDEV IQSGKYELFPDFRNVFLPENDNCSEIIFAIQLSINDGSPNNENGSYGDRLLPPGGPYPVYGFLRPTQNLVNAYKTDVKGL PYNDGKDVSENDYVDVRLDHTLARPNIPFMDVQLYDWTPREASVYGPYSPKKRLVSLNSTYYSPIWPYVNALNFYVIRYA DLLLWRAEAAIETGDLETGRKYINMIRERAKNTQHVKTMDQSQDAANYKVGVYDEPFKSKNEAVQALRMERRLEMAHEGI RFFDLVRWGVADEVINAYIAKEKVFRSHLQNAHFVKGKHEYFPIPQSMIDICGTEVMKQNPGY >Mature_543_residues MKKIFYFAASALMMCSCADSFLSEEPVGEFLPGQVESEENIEGIVTGAYAVLDGYYASDAINSGCSNWQFGDVVSDDAYK GGGGTGDQNQIHLMEIFNANPTGIDFEARWAALYEGIKRCNQAIRLLNGSEVKNKEQRLAEMRFLRGHYYFNLKIIYNQI PWIDETLVDPNEYNKKSNIEFSSDQLWEKILEEFSAAYKVLPESQADYGRPTKMAARAYMAKVYLYQSKWKECLEACDEV IQSGKYELFPDFRNVFLPENDNCSEIIFAIQLSINDGSPNNENGSYGDRLLPPGGPYPVYGFLRPTQNLVNAYKTDVKGL PYNDGKDVSENDYVDVRLDHTLARPNIPFMDVQLYDWTPREASVYGPYSPKKRLVSLNSTYYSPIWPYVNALNFYVIRYA DLLLWRAEAAIETGDLETGRKYINMIRERAKNTQHVKTMDQSQDAANYKVGVYDEPFKSKNEAVQALRMERRLEMAHEGI RFFDLVRWGVADEVINAYIAKEKVFRSHLQNAHFVKGKHEYFPIPQSMIDICGTEVMKQNPGY
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 62168; Mature: 62168
Theoretical pI: Translated: 4.88; Mature: 4.88
Prosite motif: PS00013 PROKAR_LIPOPROTEIN
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.5 %Cys (Translated Protein) 2.6 %Met (Translated Protein) 4.1 %Cys+Met (Translated Protein) 1.5 %Cys (Mature Protein) 2.6 %Met (Mature Protein) 4.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKKIFYFAASALMMCSCADSFLSEEPVGEFLPGQVESEENIEGIVTGAYAVLDGYYASDA CCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCHHEEHHHHHHHCHHHHHH INSGCSNWQFGDVVSDDAYKGGGGTGDQNQIHLMEIFNANPTGIDFEARWAALYEGIKRC HHCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEEEECCCCCCCCHHHHHHHHHHHHHHH NQAIRLLNGSEVKNKEQRLAEMRFLRGHYYFNLKIIYNQIPWIDETLVDPNEYNKKSNIE HHHHHHHCCCCCCHHHHHHHHHHHHHCEEEEEEEEEEECCCCCHHHCCCCHHCCCCCCCC FSSDQLWEKILEEFSAAYKVLPESQADYGRPTKMAARAYMAKVYLYQSKWKECLEACDEV CCHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH IQSGKYELFPDFRNVFLPENDNCSEIIFAIQLSINDGSPNNENGSYGDRLLPPGGPYPVY HHCCCEEECCCHHHEECCCCCCCCEEEEEEEEEECCCCCCCCCCCCCCCCCCCCCCCCEE GFLRPTQNLVNAYKTDVKGLPYNDGKDVSENDYVDVRLDHTLARPNIPFMDVQLYDWTPR EEECHHHHHHHHHHHCCCCCCCCCCCCCCCCCEEEEEECCEECCCCCCEEEEEEECCCCC EASVYGPYSPKKRLVSLNSTYYSPIWPYVNALNFYVIRYADLLLWRAEAAIETGDLETGR CCCEECCCCCHHHEEEECCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHH KYINMIRERAKNTQHVKTMDQSQDAANYKVGVYDEPFKSKNEAVQALRMERRLEMAHEGI HHHHHHHHHHCCCHHHHHHHCCCCCCCCEECCCCCCCCCHHHHHHHHHHHHHHHHHHCCH RFFDLVRWGVADEVINAYIAKEKVFRSHLQNAHFVKGKHEYFPIPQSMIDICGTEVMKQN HHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEECCCCCCCCCCHHHHHHHHHHHHHCC PGY CCC >Mature Secondary Structure MKKIFYFAASALMMCSCADSFLSEEPVGEFLPGQVESEENIEGIVTGAYAVLDGYYASDA CCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCHHEEHHHHHHHCHHHHHH INSGCSNWQFGDVVSDDAYKGGGGTGDQNQIHLMEIFNANPTGIDFEARWAALYEGIKRC HHCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEEEECCCCCCCCHHHHHHHHHHHHHHH NQAIRLLNGSEVKNKEQRLAEMRFLRGHYYFNLKIIYNQIPWIDETLVDPNEYNKKSNIE HHHHHHHCCCCCCHHHHHHHHHHHHHCEEEEEEEEEEECCCCCHHHCCCCHHCCCCCCCC FSSDQLWEKILEEFSAAYKVLPESQADYGRPTKMAARAYMAKVYLYQSKWKECLEACDEV CCHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH IQSGKYELFPDFRNVFLPENDNCSEIIFAIQLSINDGSPNNENGSYGDRLLPPGGPYPVY HHCCCEEECCCHHHEECCCCCCCCEEEEEEEEEECCCCCCCCCCCCCCCCCCCCCCCCEE GFLRPTQNLVNAYKTDVKGLPYNDGKDVSENDYVDVRLDHTLARPNIPFMDVQLYDWTPR EEECHHHHHHHHHHHCCCCCCCCCCCCCCCCCEEEEEECCEECCCCCCEEEEEEECCCCC EASVYGPYSPKKRLVSLNSTYYSPIWPYVNALNFYVIRYADLLLWRAEAAIETGDLETGR CCCEECCCCCHHHEEEECCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHH KYINMIRERAKNTQHVKTMDQSQDAANYKVGVYDEPFKSKNEAVQALRMERRLEMAHEGI HHHHHHHHHHCCCHHHHHHHCCCCCCCCEECCCCCCCCCHHHHHHHHHHHHHHHHHHCCH RFFDLVRWGVADEVINAYIAKEKVFRSHLQNAHFVKGKHEYFPIPQSMIDICGTEVMKQN HHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEECCCCCCCCCCHHHHHHHHHHHHHCC PGY CCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA