| Definition | Parabacteroides distasonis ATCC 8503 chromosome, complete genome. |
|---|---|
| Accession | NC_009615 |
| Length | 4,811,379 |
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The map label for this gene is 150008933
Identifier: 150008933
GI number: 150008933
Start: 2740143
End: 2741144
Strand: Direct
Name: 150008933
Synonym: BDI_2329
Alternate gene names: NA
Gene position: 2740143-2741144 (Clockwise)
Preceding gene: 150008931
Following gene: 150008934
Centisome position: 56.95
GC content: 42.71
Gene sequence:
>1002_bases ATGTCTCGAAAAATAAATCTTATTATATTCCTCTGTTTCATTTTATGCGAGGTATATGCCCAATACGTACCCGATGTATT GGGAGATGGTTATTTACGCCGTACCTTCCAGATGCCGGATGATTATGAGGGGAAGGTAGTTTGCACACTGGTCAAGAAAC CTCAACTGGATAGCGTAAAACAGGCCGTGCTGTATATCCATGGCTATAATGACTATTTTTTCCAGAAACAATTAGGGGAT AGCGTAAACGCTCACGGATATAATTTCTATGCGATGGACTTGCGGAAATACGGACGTTCGATATTACCCAATCAAAACCC GTTCTTTTGCAAGAGCCTAAAAGAGTATTTCGCTGATATCGATACCGCTTTAGCCACCATCCGGTCCGAAGGTAATGAAC GGATATTATTAATGGCGCATTCTACGGGCGGGTTGATCACACCTTATTATTTGAATAGCAAGAAAGGGGAGTTACCGATA GACGGGCTTATCTTGAACAGCCCTTTTCTAGATTGGAATTTCGGATGGTTTATGGAGAAAGTCGTACTGCCAACCGTTGC GTTTGTCGGGAGGCTATTTCCGAATCTTACCGTACAAGGTTTGGGTGATCCGAATTACGCTTATAGCCTGCTTAAGCAGT ATAAAGGAGAATGGGAATTTGATACGAACTGGAAAATGATATTCGGGCATCCGAAAAAAGCCGGATGGATCAAAGCCATA CAAGAAGCGCAACAGACGGTACAAAAAGGGCTAAAACTGGATTGTCCGATACTAGTGATGTCTTCCAACAAATCTTTTCC GGAGACAGAGACATGGCATGAGGAATACATGACCTCCGACATCGTCTTGGATGTTCAAGACATTCAAAAATACGGGGAGA AACTAGGAGACAAAGTCACGAGAGATACCATTCCAAACGGCATCCACGATCTGATCCTATCTCAAAAGCCCTATCGGAAC GATGCCTATCAAACTATATTCGAGTGGTTAAAGAAACAATAA
Upstream 100 bases:
>100_bases TGCTTATCTGTCATTTTTTATTTTATGATCTTGGTTAATTACCATTGATTGATAAACCCTATCTTTGCAAATACAGTTAT AAAATAGAAACAATATATTT
Downstream 100 bases:
>100_bases TGGTTGCACCAAACATATAAATCCTTACCTTTGCGCCCAGACAAAACATTTATATATACATGAAATCAGTGCGATCAATT TTTATAGGTCTGACTTGTCT
Product: putative lysophospholipase
Products: NA
Alternate protein names: Lysophospholipase; Alpha/Beta Hydrolase Fold Family Protein; Hydrolase; Hydrolase Alpha/Beta Fold Family Protein; Lysophospholipase-Like Protein; Carboxylic Ester Hydrolase
Number of amino acids: Translated: 333; Mature: 332
Protein sequence:
>333_residues MSRKINLIIFLCFILCEVYAQYVPDVLGDGYLRRTFQMPDDYEGKVVCTLVKKPQLDSVKQAVLYIHGYNDYFFQKQLGD SVNAHGYNFYAMDLRKYGRSILPNQNPFFCKSLKEYFADIDTALATIRSEGNERILLMAHSTGGLITPYYLNSKKGELPI DGLILNSPFLDWNFGWFMEKVVLPTVAFVGRLFPNLTVQGLGDPNYAYSLLKQYKGEWEFDTNWKMIFGHPKKAGWIKAI QEAQQTVQKGLKLDCPILVMSSNKSFPETETWHEEYMTSDIVLDVQDIQKYGEKLGDKVTRDTIPNGIHDLILSQKPYRN DAYQTIFEWLKKQ
Sequences:
>Translated_333_residues MSRKINLIIFLCFILCEVYAQYVPDVLGDGYLRRTFQMPDDYEGKVVCTLVKKPQLDSVKQAVLYIHGYNDYFFQKQLGD SVNAHGYNFYAMDLRKYGRSILPNQNPFFCKSLKEYFADIDTALATIRSEGNERILLMAHSTGGLITPYYLNSKKGELPI DGLILNSPFLDWNFGWFMEKVVLPTVAFVGRLFPNLTVQGLGDPNYAYSLLKQYKGEWEFDTNWKMIFGHPKKAGWIKAI QEAQQTVQKGLKLDCPILVMSSNKSFPETETWHEEYMTSDIVLDVQDIQKYGEKLGDKVTRDTIPNGIHDLILSQKPYRN DAYQTIFEWLKKQ >Mature_332_residues SRKINLIIFLCFILCEVYAQYVPDVLGDGYLRRTFQMPDDYEGKVVCTLVKKPQLDSVKQAVLYIHGYNDYFFQKQLGDS VNAHGYNFYAMDLRKYGRSILPNQNPFFCKSLKEYFADIDTALATIRSEGNERILLMAHSTGGLITPYYLNSKKGELPID GLILNSPFLDWNFGWFMEKVVLPTVAFVGRLFPNLTVQGLGDPNYAYSLLKQYKGEWEFDTNWKMIFGHPKKAGWIKAIQ EAQQTVQKGLKLDCPILVMSSNKSFPETETWHEEYMTSDIVLDVQDIQKYGEKLGDKVTRDTIPNGIHDLILSQKPYRND AYQTIFEWLKKQ
Specific function: Unknown
COG id: COG2267
COG function: function code I; Lysophospholipase
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 38494; Mature: 38363
Theoretical pI: Translated: 7.09; Mature: 7.09
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.5 %Cys (Translated Protein) 2.4 %Met (Translated Protein) 3.9 %Cys+Met (Translated Protein) 1.5 %Cys (Mature Protein) 2.1 %Met (Mature Protein) 3.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSRKINLIIFLCFILCEVYAQYVPDVLGDGYLRRTFQMPDDYEGKVVCTLVKKPQLDSVK CCCCHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHCCCCCCCCCCCEEEEEECCCCHHHHH QAVLYIHGYNDYFFQKQLGDSVNAHGYNFYAMDLRKYGRSILPNQNPFFCKSLKEYFADI EEEEEEECCCHHHHHHHHCCCCCCCCEEEEEHHHHHHCHHHCCCCCCHHHHHHHHHHHHH DTALATIRSEGNERILLMAHSTGGLITPYYLNSKKGELPIDGLILNSPFLDWNFGWFMEK HHHHHHHHCCCCCEEEEEEECCCCEEEEEEECCCCCCCCCCCEEECCCCCCCCHHHHHHH VVLPTVAFVGRLFPNLTVQGLGDPNYAYSLLKQYKGEWEFDTNWKMIFGHPKKAGWIKAI HHHHHHHHHHHHCCCCEEECCCCCHHHHHHHHHHCCCCEECCCCEEEEECCCCHHHHHHH QEAQQTVQKGLKLDCPILVMSSNKSFPETETWHEEYMTSDIVLDVQDIQKYGEKLGDKVT HHHHHHHHCCCCCCCCEEEEECCCCCCCCHHHHHHHHCHHHEEEHHHHHHHHHHHCCHHH RDTIPNGIHDLILSQKPYRNDAYQTIFEWLKKQ HHCCCCHHHHHHHCCCCCCCHHHHHHHHHHHCC >Mature Secondary Structure SRKINLIIFLCFILCEVYAQYVPDVLGDGYLRRTFQMPDDYEGKVVCTLVKKPQLDSVK CCCHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHCCCCCCCCCCCEEEEEECCCCHHHHH QAVLYIHGYNDYFFQKQLGDSVNAHGYNFYAMDLRKYGRSILPNQNPFFCKSLKEYFADI EEEEEEECCCHHHHHHHHCCCCCCCCEEEEEHHHHHHCHHHCCCCCCHHHHHHHHHHHHH DTALATIRSEGNERILLMAHSTGGLITPYYLNSKKGELPIDGLILNSPFLDWNFGWFMEK HHHHHHHHCCCCCEEEEEEECCCCEEEEEEECCCCCCCCCCCEEECCCCCCCCHHHHHHH VVLPTVAFVGRLFPNLTVQGLGDPNYAYSLLKQYKGEWEFDTNWKMIFGHPKKAGWIKAI HHHHHHHHHHHHCCCCEEECCCCCHHHHHHHHHHCCCCEECCCCEEEEECCCCHHHHHHH QEAQQTVQKGLKLDCPILVMSSNKSFPETETWHEEYMTSDIVLDVQDIQKYGEKLGDKVT HHHHHHHHCCCCCCCCEEEEECCCCCCCCHHHHHHHHCHHHEEEHHHHHHHHHHHCCHHH RDTIPNGIHDLILSQKPYRNDAYQTIFEWLKKQ HHCCCCHHHHHHHCCCCCCCHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA