| Definition | Parabacteroides distasonis ATCC 8503 chromosome, complete genome. |
|---|---|
| Accession | NC_009615 |
| Length | 4,811,379 |
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The map label for this gene is 150008926
Identifier: 150008926
GI number: 150008926
Start: 2730063
End: 2731622
Strand: Reverse
Name: 150008926
Synonym: BDI_2322
Alternate gene names: NA
Gene position: 2731622-2730063 (Counterclockwise)
Preceding gene: 150008927
Following gene: 150008925
Centisome position: 56.77
GC content: 44.55
Gene sequence:
>1560_bases ATGAAACAGTTATTAGCATATTGCTTATCAATTATACTATGTGTCTCTTTCACGGGATGTATGGAGAATTATTTGGATTT GTATCCTGAGGATAAGATTACTTCGGCGAGTTTCCCGGAAAATGAATCGGATATCAAACTCCTTTTAAATGGTGTCTATG CTCAATTGAGGGAAAAAGAGGTTTATAATCAAGGCTTGTTTGGCTTTGGCATAACGGATGGAGCTACCCCTAACGCATTT AACTGGGGAACGGATGAGGTTTTTAATAAGTTGGGTGCCGGGCGATTGAGCTCTAGTGACGGAGGAGTCGTAACGTATCG TTGGAAAAGATGTTACGAGATAATCTCCCGGGCAAACTATTTGTTGGCCTGTATGGATTTAGTGGATTTATCGGAAGAAG CGAAAGCCAAATATTCAGGTGAGACTCATTTTCTACGGGGACTGGCTTATTCCGTGCTAGCGGAAACCTATGGTGGGGTA CCTATTATATTGACGGACATTTCCACGGAAGAAGCTCGTAGCTTGAAGCGGGCGAGTTTGGAGGAGACTTGGCAACAAGC GCTGGATGATTATGAGGTTGCGATCACCAATCTGGGAGTGGATGCTCCTGAGCCGGGGCGTGCTACCAAGGGGGCGGCTT TAGGTATGAAAATGCGAGCCTACTTATACCAAGGTAAATACAAGGAGGTTCTGTCTTGTGTCGAGCAAATTGATGCGTTG AAGAAATATGGTCTATTCCATAGTTATGAGGGTTTGTTTGATCCGGCTAATGAGAACAATAAGGAAGTATTGTTTGATAT CCAATATATTGAAGGCGAGAATTCGCAAGGTTCCTATATTGACCAGTATTGCGGAACGGGTACCGGAAGTTGGACCCGTG GAAGCCGTTATGTCCCTACGGATGATTTGGTAGCGGCTTATGAGACGATCGACGGCTCTCCTGTAGATCCCGAGAATCCT TATGAGAACCGGGATCCTCGTTTAGGTTTCACGGCTGTACTTCCGGGTTCTTATTTCTTGGGCTATCGTTTCCCTAATTA CCTGTATCCGGGAGGTGCGTTTAATCATGCCGGTAATCGGTTGAAACATTTAAGTACCCGTAAATATCGGATTCAGGATG AGTCAAAGCTTCCTCCTTCCGGGCAGTCTTATATCAATGATATCATACTGAGATATGCGGATGTCTTATTGTCAAAAGCG GAGGCGATTATTGAGACGAATGGAAATGTGGCGGATGCGATCGCTATCCTTAACCGGATCCGTACGGAAAGGGATGACGT TAAGATCTCTTTGCTGCCGACATCTATGAGCCGTGAGGAGGCTCGTGAGAAAGTGAGACATGAGAGACGGATTGAGTTAG CATTAGAAGGACGTTATTGGTCAGATGTAAAACGTTGGAAAATCGGTAAGGAACTTTACCCTATGATTATTAAGGATCAT GAGGGTAGCGTGATCGAGACGAAGTTCCCAAATGGCTATTTGGAATATTACGATTTATTACCGATTCCTGATAGCGAGCG TTCTTTGAATCCGAATTTGGATCAGAATCCGGGTTGGTAA
Upstream 100 bases:
>100_bases GAAGGATATGATCCGGAAAGAAATACGTTTGATTCGGGTACCAATTATTACCCGACTCCGAGAATATTTACATTTGGTAT AAATCTTAATTTCTAAAAGT
Downstream 100 bases:
>100_bases TGTGCAACTAAAAGAAAAATGAAATGAAACTTATATCTAACATAATATCGGTATTAGCCTTTTCAGGAGCGGCCGTGGCT ACTCAAGCGGCGGAAAGGCC
Product: hypothetical protein
Products: NA
Alternate protein names: Outer Membrane Protein; Ragb/Susd Domain Protein; RagB/SusD Domain-Containing Protein; SusD/RagB Family Protein; Lipoprotein; RagB/SusD Family Protein; Liporotein; SusD Family Protein
Number of amino acids: Translated: 519; Mature: 519
Protein sequence:
>519_residues MKQLLAYCLSIILCVSFTGCMENYLDLYPEDKITSASFPENESDIKLLLNGVYAQLREKEVYNQGLFGFGITDGATPNAF NWGTDEVFNKLGAGRLSSSDGGVVTYRWKRCYEIISRANYLLACMDLVDLSEEAKAKYSGETHFLRGLAYSVLAETYGGV PIILTDISTEEARSLKRASLEETWQQALDDYEVAITNLGVDAPEPGRATKGAALGMKMRAYLYQGKYKEVLSCVEQIDAL KKYGLFHSYEGLFDPANENNKEVLFDIQYIEGENSQGSYIDQYCGTGTGSWTRGSRYVPTDDLVAAYETIDGSPVDPENP YENRDPRLGFTAVLPGSYFLGYRFPNYLYPGGAFNHAGNRLKHLSTRKYRIQDESKLPPSGQSYINDIILRYADVLLSKA EAIIETNGNVADAIAILNRIRTERDDVKISLLPTSMSREEAREKVRHERRIELALEGRYWSDVKRWKIGKELYPMIIKDH EGSVIETKFPNGYLEYYDLLPIPDSERSLNPNLDQNPGW
Sequences:
>Translated_519_residues MKQLLAYCLSIILCVSFTGCMENYLDLYPEDKITSASFPENESDIKLLLNGVYAQLREKEVYNQGLFGFGITDGATPNAF NWGTDEVFNKLGAGRLSSSDGGVVTYRWKRCYEIISRANYLLACMDLVDLSEEAKAKYSGETHFLRGLAYSVLAETYGGV PIILTDISTEEARSLKRASLEETWQQALDDYEVAITNLGVDAPEPGRATKGAALGMKMRAYLYQGKYKEVLSCVEQIDAL KKYGLFHSYEGLFDPANENNKEVLFDIQYIEGENSQGSYIDQYCGTGTGSWTRGSRYVPTDDLVAAYETIDGSPVDPENP YENRDPRLGFTAVLPGSYFLGYRFPNYLYPGGAFNHAGNRLKHLSTRKYRIQDESKLPPSGQSYINDIILRYADVLLSKA EAIIETNGNVADAIAILNRIRTERDDVKISLLPTSMSREEAREKVRHERRIELALEGRYWSDVKRWKIGKELYPMIIKDH EGSVIETKFPNGYLEYYDLLPIPDSERSLNPNLDQNPGW >Mature_519_residues MKQLLAYCLSIILCVSFTGCMENYLDLYPEDKITSASFPENESDIKLLLNGVYAQLREKEVYNQGLFGFGITDGATPNAF NWGTDEVFNKLGAGRLSSSDGGVVTYRWKRCYEIISRANYLLACMDLVDLSEEAKAKYSGETHFLRGLAYSVLAETYGGV PIILTDISTEEARSLKRASLEETWQQALDDYEVAITNLGVDAPEPGRATKGAALGMKMRAYLYQGKYKEVLSCVEQIDAL KKYGLFHSYEGLFDPANENNKEVLFDIQYIEGENSQGSYIDQYCGTGTGSWTRGSRYVPTDDLVAAYETIDGSPVDPENP YENRDPRLGFTAVLPGSYFLGYRFPNYLYPGGAFNHAGNRLKHLSTRKYRIQDESKLPPSGQSYINDIILRYADVLLSKA EAIIETNGNVADAIAILNRIRTERDDVKISLLPTSMSREEAREKVRHERRIELALEGRYWSDVKRWKIGKELYPMIIKDH EGSVIETKFPNGYLEYYDLLPIPDSERSLNPNLDQNPGW
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 58589; Mature: 58589
Theoretical pI: Translated: 4.74; Mature: 4.74
Prosite motif: PS00013 PROKAR_LIPOPROTEIN
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.3 %Cys (Translated Protein) 1.3 %Met (Translated Protein) 2.7 %Cys+Met (Translated Protein) 1.3 %Cys (Mature Protein) 1.3 %Met (Mature Protein) 2.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKQLLAYCLSIILCVSFTGCMENYLDLYPEDKITSASFPENESDIKLLLNGVYAQLREKE CHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHH VYNQGLFGFGITDGATPNAFNWGTDEVFNKLGAGRLSSSDGGVVTYRWKRCYEIISRANY HHHCCCEEECCCCCCCCCCCCCCHHHHHHHHCCCCCCCCCCCEEEEHHHHHHHHHHHHHH LLACMDLVDLSEEAKAKYSGETHFLRGLAYSVLAETYGGVPIILTDISTEEARSLKRASL HHHHHHHHHCCHHHHHHCCCCHHHHHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHH EETWQQALDDYEVAITNLGVDAPEPGRATKGAALGMKMRAYLYQGKYKEVLSCVEQIDAL HHHHHHHHHHHHEEHEECCCCCCCCCCCCCCHHHHHHHHHHHHCCCHHHHHHHHHHHHHH KKYGLFHSYEGLFDPANENNKEVLFDIQYIEGENSQGSYIDQYCGTGTGSWTRGSRYVPT HHHCCHHCCCCCCCCCCCCCCEEEEEEEEEECCCCCCCHHHHHHCCCCCCCCCCCCCCCC DDLVAAYETIDGSPVDPENPYENRDPRLGFTAVLPGSYFLGYRFPNYLYPGGAFNHAGNR HHHHHHHHHCCCCCCCCCCCCCCCCCCCCEEEECCCCEEEEECCCCCCCCCCCCHHHCHH LKHLSTRKYRIQDESKLPPSGQSYINDIILRYADVLLSKAEAIIETNGNVADAIAILNRI HHHHCCCEEEECCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHH RTERDDVKISLLPTSMSREEAREKVRHERRIELALEGRYWSDVKRWKIGKELYPMIIKDH HCCCCCEEEEEECCCCCHHHHHHHHHHHHEEEEEECCCHHHHHHHHHHCHHHCCEEEECC EGSVIETKFPNGYLEYYDLLPIPDSERSLNPNLDQNPGW CCCEEEEECCCCCEEHEEECCCCCCCCCCCCCCCCCCCC >Mature Secondary Structure MKQLLAYCLSIILCVSFTGCMENYLDLYPEDKITSASFPENESDIKLLLNGVYAQLREKE CHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHH VYNQGLFGFGITDGATPNAFNWGTDEVFNKLGAGRLSSSDGGVVTYRWKRCYEIISRANY HHHCCCEEECCCCCCCCCCCCCCHHHHHHHHCCCCCCCCCCCEEEEHHHHHHHHHHHHHH LLACMDLVDLSEEAKAKYSGETHFLRGLAYSVLAETYGGVPIILTDISTEEARSLKRASL HHHHHHHHHCCHHHHHHCCCCHHHHHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHH EETWQQALDDYEVAITNLGVDAPEPGRATKGAALGMKMRAYLYQGKYKEVLSCVEQIDAL HHHHHHHHHHHHEEHEECCCCCCCCCCCCCCHHHHHHHHHHHHCCCHHHHHHHHHHHHHH KKYGLFHSYEGLFDPANENNKEVLFDIQYIEGENSQGSYIDQYCGTGTGSWTRGSRYVPT HHHCCHHCCCCCCCCCCCCCCEEEEEEEEEECCCCCCCHHHHHHCCCCCCCCCCCCCCCC DDLVAAYETIDGSPVDPENPYENRDPRLGFTAVLPGSYFLGYRFPNYLYPGGAFNHAGNR HHHHHHHHHCCCCCCCCCCCCCCCCCCCCEEEECCCCEEEEECCCCCCCCCCCCHHHCHH LKHLSTRKYRIQDESKLPPSGQSYINDIILRYADVLLSKAEAIIETNGNVADAIAILNRI HHHHCCCEEEECCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHH RTERDDVKISLLPTSMSREEAREKVRHERRIELALEGRYWSDVKRWKIGKELYPMIIKDH HCCCCCEEEEEECCCCCHHHHHHHHHHHHEEEEEECCCHHHHHHHHHHCHHHCCEEEECC EGSVIETKFPNGYLEYYDLLPIPDSERSLNPNLDQNPGW CCCEEEEECCCCCEEHEEECCCCCCCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA