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The map label for this gene is 150008915

Identifier: 150008915

GI number: 150008915

Start: 2712391

End: 2714418

Strand: Reverse

Name: 150008915

Synonym: BDI_2311

Alternate gene names: NA

Gene position: 2714418-2712391 (Counterclockwise)

Preceding gene: 150008917

Following gene: 150008913

Centisome position: 56.42

GC content: 45.02

Gene sequence:

>2028_bases
TTGTCTCATCTAAAAATTATATACTTGGACTTTCAGTTAGACACGAACAATAAGGAGTTTCAGGATGCCTTGCAACTGAT
CACCCACACTCGCCAGTCTGTTTTCCTGACAGGGAAAGCAGGGACCGGCAAGTCTACTTTTTTGAAGTATATTTGCAATC
ATACGAAGAAAAAGTATGTGGTGCTGGCTCCTACCGGAATAGCGGCCATAAATGCGGGCGGCGTTACCTTGCATTCCTTT
TTCAAGCTCCCTTTTCGGCCGATGTTGCCGGATGATCCGGATTTAAGTTTGTCTCATGGTCGTATCTTTGAGTTTTTTAA
GTATCCGAAGGAGAAACGGAAAATTATCGCGGAGGTCGATTTGATCATCATTGACGAGATATCGATGGTGAGGGCGGATA
TTATTGATTGTGTAGATCGTATCTTGAGGGTCTATTCCGGTAATATGCGATTGCCTTTTGGCGGAAAGCAGCTATTGTTC
GTGGGAGATGTCTTCCAGTTGGAACCGGTTGTTCCGTCGGATCAAAAAGAGATATTGAGTTTGTTCTATGCGAGCCCTTT
CTTTTTCTCGGCTCGTGTGTTCAAGGACATTAATTTAGTGCCGATCGAGTTGCAAAAAGTGTATCGCCAGACCGATTCTG
TTTTTATCAATATATTGGATCGGATTCGTAATAATGCCGCTAGAAAACAGGAGTTGGATACGTTGAACGGTCGTTATTTT
CCGTCTTTCGAGCCTCAGAATGAGGATATGTATATCACGTTGGCCACTCGCCGGGATCAGGTTGATTTTATCAATGAGAA
GAAGTTGGCCGAGCTTCCCGGAGAAGAGTACGTCTCCGTGGGAAAGATCGAGGGGGATTTTCCAGAATCCTCACTACCTA
CCCAGCTGAATTTATCCATCAAGGAACAGGCGCAGGTTATTTTTATCGATAATGATTATGAGCGTCGTTGGGTGAACGGG
ACGATCGGTATGGTATCGGGTATCGATGAGAATGGAAATGTTTATGTCTTGCTGGAGAGCGGTGTAGAACATTTGGTCGA
ACCTACCTCATGGCGAAATTATAAATACAAATATAACGAGAAAGAGAAACGGATCGAGGAAGAGATTGTCGGTACGTTCG
AACAATTGCCGATTCGTTTGGCTTGGGCGATCACGGTGCATAAGAGTCAAGGCTTGACTTTTAGCCGGGTGGTAGTTGAT
TTGACCGGAGGGGTATTTGCCGGGGGACAAACCTATGTGGCGTTGAGTCGTTGTACTTCATTGGAAGGATTGGTGCTAAA
AAGCAAGATCTCTTCCCGGGATATCTTTATCCGGAAAGAGATCGTAGAATTCAGCCAAATATTCAATAACCAAGCATTAA
TAGAGAAAAGTATCAAAGAGAGCGAGGCGGAATTGCAATATGGTCGGGCGGCTCAGGGTTTTCGGCAGGGTAATATGAAA
GAGGCGGTCGAGGCTTTTGCCGCCGCCGTATCTAAACGGAATGAATTGGATAATCCGATGGTACAACGGCTGCTTCGTTT
GAAATTGCAAGCCTTGAATAGTCAAAAGGCACAGATTAAGGCTCTGAGGGAAGAATTGCATTCGCTTCGTGAGACCCAGA
AAGAGTATGCACATGAATATTACTTGATGGGTAACGAGTGCATAACGAAGGCCCATGACGCGAATGCCGCTATTCGTTGT
TTTGATAAAGCCTTGAATTTGAATCCGAATTATGTGGAAGCTTGGGTACGCAAAGGGGTTACTTTATTGGATATAGGTGA
GGACTACGACGCTCAGGTTTGTTTAAACAAAGCGGTAAAATTAAGTCCGAAATCTTTTAAGGCCCGCTATAACCGTGGAA
AATGCCTATTGAAGCTCAAATATTACGATGAAGCTATTCTGGATTTCCAGCAGGCGGTAAGTATCAAACCTAAACATGCG
GCTTCCCACGAATATCTGGCGGAGGGTTTCCGGGCGATCGGAGAGGACGAATTAGCCCAGCGGCATCAAGATATAGCGGA
TGCCTTGCGAGGGGGAGAGGATATATGA

Upstream 100 bases:

>100_bases
TTTGATATTAATTTGATATCACAAAATAAGTGATTTTTATGGAGACTGCCAAATATTTTGAGGGATATTATTAGAGTGAT
CTGTAAATATTTTCATAGCT

Downstream 100 bases:

>100_bases
TGAAATAGAAAAGGCGAGAAAATTTATTTCCCGCCTTTTTTATGGAGTTATATCTCTTGATTAATTAAAGATGTAACGGA
TACCAACCTGCATTTTCCAG

Product: putative helicase

Products: NA

Alternate protein names: Helicase; TPR Domain Protein; TPR Domain-Containing Protein; TPR Repeat-Containing Protein; Tetratricopeptide Repeat Domain Protein; ATPase; Exonuclease V Subunit Alpha; Helicase-Related Protein; 5-3' DNA Helicase; Aaa ATPase; Tetratricopeptide Repeat Family; Glycosysltransferase; Hrdc Domain Protein; HRDC Domain Protein; Helicase-Family Protein; RecD-Like Exodeoxyribonuclease V Alpha Chain; RRM3/PIF1 Helicase-Like Protein; Helicase Protein; ATP-Dependent ExoDNAse Alpha Subunit; DNA Helicase AAA ATPase; DNA Helicase/AAA ATPase; Tetratricopeptide Repeat Domain-Containing Protein; Helicase RecD/TraA Family

Number of amino acids: Translated: 675; Mature: 674

Protein sequence:

>675_residues
MSHLKIIYLDFQLDTNNKEFQDALQLITHTRQSVFLTGKAGTGKSTFLKYICNHTKKKYVVLAPTGIAAINAGGVTLHSF
FKLPFRPMLPDDPDLSLSHGRIFEFFKYPKEKRKIIAEVDLIIIDEISMVRADIIDCVDRILRVYSGNMRLPFGGKQLLF
VGDVFQLEPVVPSDQKEILSLFYASPFFFSARVFKDINLVPIELQKVYRQTDSVFINILDRIRNNAARKQELDTLNGRYF
PSFEPQNEDMYITLATRRDQVDFINEKKLAELPGEEYVSVGKIEGDFPESSLPTQLNLSIKEQAQVIFIDNDYERRWVNG
TIGMVSGIDENGNVYVLLESGVEHLVEPTSWRNYKYKYNEKEKRIEEEIVGTFEQLPIRLAWAITVHKSQGLTFSRVVVD
LTGGVFAGGQTYVALSRCTSLEGLVLKSKISSRDIFIRKEIVEFSQIFNNQALIEKSIKESEAELQYGRAAQGFRQGNMK
EAVEAFAAAVSKRNELDNPMVQRLLRLKLQALNSQKAQIKALREELHSLRETQKEYAHEYYLMGNECITKAHDANAAIRC
FDKALNLNPNYVEAWVRKGVTLLDIGEDYDAQVCLNKAVKLSPKSFKARYNRGKCLLKLKYYDEAILDFQQAVSIKPKHA
ASHEYLAEGFRAIGEDELAQRHQDIADALRGGEDI

Sequences:

>Translated_675_residues
MSHLKIIYLDFQLDTNNKEFQDALQLITHTRQSVFLTGKAGTGKSTFLKYICNHTKKKYVVLAPTGIAAINAGGVTLHSF
FKLPFRPMLPDDPDLSLSHGRIFEFFKYPKEKRKIIAEVDLIIIDEISMVRADIIDCVDRILRVYSGNMRLPFGGKQLLF
VGDVFQLEPVVPSDQKEILSLFYASPFFFSARVFKDINLVPIELQKVYRQTDSVFINILDRIRNNAARKQELDTLNGRYF
PSFEPQNEDMYITLATRRDQVDFINEKKLAELPGEEYVSVGKIEGDFPESSLPTQLNLSIKEQAQVIFIDNDYERRWVNG
TIGMVSGIDENGNVYVLLESGVEHLVEPTSWRNYKYKYNEKEKRIEEEIVGTFEQLPIRLAWAITVHKSQGLTFSRVVVD
LTGGVFAGGQTYVALSRCTSLEGLVLKSKISSRDIFIRKEIVEFSQIFNNQALIEKSIKESEAELQYGRAAQGFRQGNMK
EAVEAFAAAVSKRNELDNPMVQRLLRLKLQALNSQKAQIKALREELHSLRETQKEYAHEYYLMGNECITKAHDANAAIRC
FDKALNLNPNYVEAWVRKGVTLLDIGEDYDAQVCLNKAVKLSPKSFKARYNRGKCLLKLKYYDEAILDFQQAVSIKPKHA
ASHEYLAEGFRAIGEDELAQRHQDIADALRGGEDI
>Mature_674_residues
SHLKIIYLDFQLDTNNKEFQDALQLITHTRQSVFLTGKAGTGKSTFLKYICNHTKKKYVVLAPTGIAAINAGGVTLHSFF
KLPFRPMLPDDPDLSLSHGRIFEFFKYPKEKRKIIAEVDLIIIDEISMVRADIIDCVDRILRVYSGNMRLPFGGKQLLFV
GDVFQLEPVVPSDQKEILSLFYASPFFFSARVFKDINLVPIELQKVYRQTDSVFINILDRIRNNAARKQELDTLNGRYFP
SFEPQNEDMYITLATRRDQVDFINEKKLAELPGEEYVSVGKIEGDFPESSLPTQLNLSIKEQAQVIFIDNDYERRWVNGT
IGMVSGIDENGNVYVLLESGVEHLVEPTSWRNYKYKYNEKEKRIEEEIVGTFEQLPIRLAWAITVHKSQGLTFSRVVVDL
TGGVFAGGQTYVALSRCTSLEGLVLKSKISSRDIFIRKEIVEFSQIFNNQALIEKSIKESEAELQYGRAAQGFRQGNMKE
AVEAFAAAVSKRNELDNPMVQRLLRLKLQALNSQKAQIKALREELHSLRETQKEYAHEYYLMGNECITKAHDANAAIRCF
DKALNLNPNYVEAWVRKGVTLLDIGEDYDAQVCLNKAVKLSPKSFKARYNRGKCLLKLKYYDEAILDFQQAVSIKPKHAA
SHEYLAEGFRAIGEDELAQRHQDIADALRGGEDI

Specific function: Unknown

COG id: COG0507

COG function: function code L; ATP-dependent exoDNAse (exonuclease V), alpha subunit - helicase superfamily I member

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

Organism=Homo sapiens, GI82546872, Length=402, Percent_Identity=33.0845771144279, Blast_Score=173, Evalue=4e-43,
Organism=Caenorhabditis elegans, GI25143421, Length=415, Percent_Identity=30.6024096385542, Blast_Score=153, Evalue=3e-37,
Organism=Saccharomyces cerevisiae, GI6321820, Length=325, Percent_Identity=31.6923076923077, Blast_Score=125, Evalue=3e-29,
Organism=Saccharomyces cerevisiae, GI6323579, Length=325, Percent_Identity=30.4615384615385, Blast_Score=122, Evalue=2e-28,
Organism=Drosophila melanogaster, GI19920652, Length=444, Percent_Identity=29.0540540540541, Blast_Score=149, Evalue=8e-36,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 76996; Mature: 76865

Theoretical pI: Translated: 7.16; Mature: 7.16

Prosite motif: PS50005 TPR L=RR ; PS50293 TPR_REGION

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.0 %Cys     (Translated Protein)
1.3 %Met     (Translated Protein)
2.4 %Cys+Met (Translated Protein)
1.0 %Cys     (Mature Protein)
1.2 %Met     (Mature Protein)
2.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSHLKIIYLDFQLDTNNKEFQDALQLITHTRQSVFLTGKAGTGKSTFLKYICNHTKKKYV
CCCEEEEEEEEEECCCCHHHHHHHHHHHCCCCEEEEEECCCCCHHHHHHHHHCCCCCCEE
VLAPTGIAAINAGGVTLHSFFKLPFRPMLPDDPDLSLSHGRIFEFFKYPKEKRKIIAEVD
EEECCCEEEEECCCEEHHHHHCCCCCCCCCCCCCCCCCCCHHHHHHHCCHHHHHHHHHCC
LIIIDEISMVRADIIDCVDRILRVYSGNMRLPFGGKQLLFVGDVFQLEPVVPSDQKEILS
EEEECCHHHHHHHHHHHHHHHHHHHCCCEECCCCCCEEEEEECEEEECCCCCCCHHHHHH
LFYASPFFFSARVFKDINLVPIELQKVYRQTDSVFINILDRIRNNAARKQELDTLNGRYF
HHHCCCHHHHHHHHCCCCEEEHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHCCCCCC
PSFEPQNEDMYITLATRRDQVDFINEKKLAELPGEEYVSVGKIEGDFPESSLPTQLNLSI
CCCCCCCCCEEEEEECCCCCCHHCCCHHHHHCCCHHHEEECCCCCCCCCCCCCCEEEEEE
KEQAQVIFIDNDYERRWVNGTIGMVSGIDENGNVYVLLESGVEHLVEPTSWRNYKYKYNE
ECCEEEEEEECCCCCEEECCCEEEEECCCCCCCEEEEECCCHHHHCCCCCCCCCEEECCH
KEKRIEEEIVGTFEQLPIRLAWAITVHKSQGLTFSRVVVDLTGGVFAGGQTYVALSRCTS
HHHHHHHHHHHHHHHCCEEEEEEEEEECCCCCCHHHEEEEECCCEEECCCEEEEHHHHCC
LEGLVLKSKISSRDIFIRKEIVEFSQIFNNQALIEKSIKESEAELQYGRAAQGFRQGNMK
CCCEEEECCCCCCCCHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHCHHHHHHHCCCHH
EAVEAFAAAVSKRNELDNPMVQRLLRLKLQALNSQKAQIKALREELHSLRETQKEYAHEY
HHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHE
YLMGNECITKAHDANAAIRCFDKALNLNPNYVEAWVRKGVTLLDIGEDYDAQVCLNKAVK
EEECCHHHCCCCCCCHHHHHHHHHHCCCCHHHHHHHHCCCEEEECCCCCCHHHHHHHHHC
LSPKSFKARYNRGKCLLKLKYYDEAILDFQQAVSIKPKHAASHEYLAEGFRAIGEDELAQ
CCCHHHHHHCCCCCEEEEEEEHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHCCHHHHHH
RHQDIADALRGGEDI
HHHHHHHHHCCCCCC
>Mature Secondary Structure 
SHLKIIYLDFQLDTNNKEFQDALQLITHTRQSVFLTGKAGTGKSTFLKYICNHTKKKYV
CCEEEEEEEEEECCCCHHHHHHHHHHHCCCCEEEEEECCCCCHHHHHHHHHCCCCCCEE
VLAPTGIAAINAGGVTLHSFFKLPFRPMLPDDPDLSLSHGRIFEFFKYPKEKRKIIAEVD
EEECCCEEEEECCCEEHHHHHCCCCCCCCCCCCCCCCCCCHHHHHHHCCHHHHHHHHHCC
LIIIDEISMVRADIIDCVDRILRVYSGNMRLPFGGKQLLFVGDVFQLEPVVPSDQKEILS
EEEECCHHHHHHHHHHHHHHHHHHHCCCEECCCCCCEEEEEECEEEECCCCCCCHHHHHH
LFYASPFFFSARVFKDINLVPIELQKVYRQTDSVFINILDRIRNNAARKQELDTLNGRYF
HHHCCCHHHHHHHHCCCCEEEHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHCCCCCC
PSFEPQNEDMYITLATRRDQVDFINEKKLAELPGEEYVSVGKIEGDFPESSLPTQLNLSI
CCCCCCCCCEEEEEECCCCCCHHCCCHHHHHCCCHHHEEECCCCCCCCCCCCCCEEEEEE
KEQAQVIFIDNDYERRWVNGTIGMVSGIDENGNVYVLLESGVEHLVEPTSWRNYKYKYNE
ECCEEEEEEECCCCCEEECCCEEEEECCCCCCCEEEEECCCHHHHCCCCCCCCCEEECCH
KEKRIEEEIVGTFEQLPIRLAWAITVHKSQGLTFSRVVVDLTGGVFAGGQTYVALSRCTS
HHHHHHHHHHHHHHHCCEEEEEEEEEECCCCCCHHHEEEEECCCEEECCCEEEEHHHHCC
LEGLVLKSKISSRDIFIRKEIVEFSQIFNNQALIEKSIKESEAELQYGRAAQGFRQGNMK
CCCEEEECCCCCCCCHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHCHHHHHHHCCCHH
EAVEAFAAAVSKRNELDNPMVQRLLRLKLQALNSQKAQIKALREELHSLRETQKEYAHEY
HHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHE
YLMGNECITKAHDANAAIRCFDKALNLNPNYVEAWVRKGVTLLDIGEDYDAQVCLNKAVK
EEECCHHHCCCCCCCHHHHHHHHHHCCCCHHHHHHHHCCCEEEECCCCCCHHHHHHHHHC
LSPKSFKARYNRGKCLLKLKYYDEAILDFQQAVSIKPKHAASHEYLAEGFRAIGEDELAQ
CCCHHHHHHCCCCCEEEEEEEHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHCCHHHHHH
RHQDIADALRGGEDI
HHHHHHHHHCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA