| Definition | Parabacteroides distasonis ATCC 8503 chromosome, complete genome. |
|---|---|
| Accession | NC_009615 |
| Length | 4,811,379 |
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The map label for this gene is 150008912
Identifier: 150008912
GI number: 150008912
Start: 2703965
End: 2705170
Strand: Reverse
Name: 150008912
Synonym: BDI_2308
Alternate gene names: NA
Gene position: 2705170-2703965 (Counterclockwise)
Preceding gene: 150008913
Following gene: 150008908
Centisome position: 56.22
GC content: 44.94
Gene sequence:
>1206_bases ATGTGGAATAATCGTATTGAGTTCTTACTCGTTAGTTTCTTTTGTATTTGTTCATTGGCTTTTACCGGTTGCCAAACGAA AAAACAATCGGATCGTTATGTCGTAGTTTTATCAATGGACGGTTTCCGCTCTGATTATCCCTCACGTGCTCATACTCCGA CGTTGGATTCTTTGGCGAATGTAGGGGTTCGCTCCACGTTTCGCCCATGTTATCCCAGCGTGACTTTCCCGAATCATTAT AGCATGGCTACCGGATTGCATCCGGATCACCATGGTTTGGTAAATAATTTCTTTTATGACGCGGAGCTTGATAGCTCATA CCGTATGGGAAACCTGGATCCGCGATTTTATGGTGGAGAACCTATTTGGAATACGGCGGAACGCCAAGGGGTTCGTACCG CTTCCTTCTATTGGGTCGGTAGCGAGGTGCCTTTGGCGAGTGGCCAGCCTTCAATATGGAAGCCGTTTGATAAATCGGTT TCTTTTTCAGATCGTGCTGATTCCGTGATCTCTTGGCTGAAGTTGCCGGAAGATATACGTCCTCATTTGATTATGTGGTA TATGGAAGAGCCGGATGCGATAGGTCATTCCGCTACCCCGGATTCCTCGGCAACCTTGGATGTGGTAGAGAACTTGGATA AAGTCTTGAATCATTTCTTCACGGAAGCCCGTAAGCTGGATATTTTCGATAAGATCGATTTTATCGTTCTCTCGGATCAT GGAATGGCCACCTATTATCCCGAGAGATATGTGAACTTGAATGATTATCTACCCCGGGATAGTTTCGATTATGTCTTTGA TGGCGTTCCTACATTATTATATCCGAAGAAAACCTATGTGGATACTGCCTATGCGATTTTACAGAAAGTGCCGAATATAA CCGTATGGAAGAAAAACGAGATCCCAGAGAAATTGGTTTACGGAAAGAATCCTCGAGTTAGTGATCTGGTTGTTTCTCCA CATATTGGAACGTATGTGCAATTCCGCGAGAAATCATCTCCCCGTTATGCGGCGACACATGGTTACGATAATTTTACACC GGAGATGGAGGCTATATTCTATGCGGCAGGTCCCTCGTTCAAGAAACACGTAGAGGTTCCGCAAATGGCGAACGTGAACC TCTATTTGATGATCGCACGCTTATTGAATATACAGCCCGCCCCGAATGATGGAGATAGCGCTGTCGTTCAGCGGTTATTT AAATGA
Upstream 100 bases:
>100_bases GGTATCAAGTATATCTTCTAAAAAAAATCTTTCATTAGATAAAATTTAATAATTAGAAGAGGTTCACTATCTTTGTGGAC CTCTTTTTTAATTTAATGAT
Downstream 100 bases:
>100_bases TAGGACTTCGCGCTACTTTCTAAATGGAGATTTACTGCACGGGCCTTGCAGTACTACTGTAAAGCCGGTTGCAGTAATTG ATGCCTTATTGATGTTCGCA
Product: type I phosphodiesterase/nucleotide pyrophosphatase family protein
Products: NA
Alternate protein names: Nucleotide Diphosphatase; Type I Phosphodiesterase/Nucleotide Pyrophosphatase Protein; Phosphodiesterase; Type I Phosphodiesterase/Nucleotide Pyrophosphatase; Phosphodiesterase-Nucleotide Pyrophosphatase; RB13-6 Antigen; Sulfatase; Phosphodiesterase-Nucleotide Pyrophosphatase-Like Protein; Nucleotide Pyrophosphatase Family Protein
Number of amino acids: Translated: 401; Mature: 401
Protein sequence:
>401_residues MWNNRIEFLLVSFFCICSLAFTGCQTKKQSDRYVVVLSMDGFRSDYPSRAHTPTLDSLANVGVRSTFRPCYPSVTFPNHY SMATGLHPDHHGLVNNFFYDAELDSSYRMGNLDPRFYGGEPIWNTAERQGVRTASFYWVGSEVPLASGQPSIWKPFDKSV SFSDRADSVISWLKLPEDIRPHLIMWYMEEPDAIGHSATPDSSATLDVVENLDKVLNHFFTEARKLDIFDKIDFIVLSDH GMATYYPERYVNLNDYLPRDSFDYVFDGVPTLLYPKKTYVDTAYAILQKVPNITVWKKNEIPEKLVYGKNPRVSDLVVSP HIGTYVQFREKSSPRYAATHGYDNFTPEMEAIFYAAGPSFKKHVEVPQMANVNLYLMIARLLNIQPAPNDGDSAVVQRLF K
Sequences:
>Translated_401_residues MWNNRIEFLLVSFFCICSLAFTGCQTKKQSDRYVVVLSMDGFRSDYPSRAHTPTLDSLANVGVRSTFRPCYPSVTFPNHY SMATGLHPDHHGLVNNFFYDAELDSSYRMGNLDPRFYGGEPIWNTAERQGVRTASFYWVGSEVPLASGQPSIWKPFDKSV SFSDRADSVISWLKLPEDIRPHLIMWYMEEPDAIGHSATPDSSATLDVVENLDKVLNHFFTEARKLDIFDKIDFIVLSDH GMATYYPERYVNLNDYLPRDSFDYVFDGVPTLLYPKKTYVDTAYAILQKVPNITVWKKNEIPEKLVYGKNPRVSDLVVSP HIGTYVQFREKSSPRYAATHGYDNFTPEMEAIFYAAGPSFKKHVEVPQMANVNLYLMIARLLNIQPAPNDGDSAVVQRLF K >Mature_401_residues MWNNRIEFLLVSFFCICSLAFTGCQTKKQSDRYVVVLSMDGFRSDYPSRAHTPTLDSLANVGVRSTFRPCYPSVTFPNHY SMATGLHPDHHGLVNNFFYDAELDSSYRMGNLDPRFYGGEPIWNTAERQGVRTASFYWVGSEVPLASGQPSIWKPFDKSV SFSDRADSVISWLKLPEDIRPHLIMWYMEEPDAIGHSATPDSSATLDVVENLDKVLNHFFTEARKLDIFDKIDFIVLSDH GMATYYPERYVNLNDYLPRDSFDYVFDGVPTLLYPKKTYVDTAYAILQKVPNITVWKKNEIPEKLVYGKNPRVSDLVVSP HIGTYVQFREKSSPRYAATHGYDNFTPEMEAIFYAAGPSFKKHVEVPQMANVNLYLMIARLLNIQPAPNDGDSAVVQRLF K
Specific function: Unknown
COG id: COG1524
COG function: function code R; Uncharacterized proteins of the AP superfamily
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
Organism=Homo sapiens, GI111160296, Length=388, Percent_Identity=32.9896907216495, Blast_Score=235, Evalue=5e-62, Organism=Homo sapiens, GI170650661, Length=391, Percent_Identity=32.9923273657289, Blast_Score=229, Evalue=4e-60, Organism=Homo sapiens, GI11034849, Length=400, Percent_Identity=31.75, Blast_Score=219, Evalue=4e-57, Organism=Homo sapiens, GI195947389, Length=391, Percent_Identity=28.3887468030691, Blast_Score=179, Evalue=4e-45, Organism=Homo sapiens, GI91823602, Length=391, Percent_Identity=28.3887468030691, Blast_Score=179, Evalue=5e-45, Organism=Homo sapiens, GI45545421, Length=388, Percent_Identity=30.6701030927835, Blast_Score=177, Evalue=2e-44, Organism=Homo sapiens, GI7662358, Length=386, Percent_Identity=28.7564766839378, Blast_Score=170, Evalue=2e-42, Organism=Homo sapiens, GI23503267, Length=392, Percent_Identity=27.5510204081633, Blast_Score=161, Evalue=1e-39, Organism=Homo sapiens, GI91823274, Length=443, Percent_Identity=26.410835214447, Blast_Score=151, Evalue=1e-36, Organism=Homo sapiens, GI310110107, Length=395, Percent_Identity=25.3164556962025, Blast_Score=124, Evalue=1e-28, Organism=Caenorhabditis elegans, GI115533128, Length=376, Percent_Identity=30.5851063829787, Blast_Score=195, Evalue=4e-50, Organism=Caenorhabditis elegans, GI115533126, Length=376, Percent_Identity=30.5851063829787, Blast_Score=195, Evalue=4e-50, Organism=Caenorhabditis elegans, GI212646262, Length=376, Percent_Identity=30.5851063829787, Blast_Score=195, Evalue=4e-50, Organism=Caenorhabditis elegans, GI115533132, Length=372, Percent_Identity=30.6451612903226, Blast_Score=174, Evalue=8e-44, Organism=Caenorhabditis elegans, GI115533130, Length=372, Percent_Identity=30.6451612903226, Blast_Score=174, Evalue=8e-44, Organism=Caenorhabditis elegans, GI71981768, Length=435, Percent_Identity=25.0574712643678, Blast_Score=150, Evalue=2e-36, Organism=Caenorhabditis elegans, GI71986535, Length=386, Percent_Identity=21.5025906735751, Blast_Score=72, Evalue=4e-13, Organism=Saccharomyces cerevisiae, GI6319874, Length=435, Percent_Identity=24.8275862068966, Blast_Score=111, Evalue=2e-25, Organism=Saccharomyces cerevisiae, GI6320821, Length=405, Percent_Identity=24.6913580246914, Blast_Score=101, Evalue=2e-22,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 45806; Mature: 45806
Theoretical pI: Translated: 6.38; Mature: 6.38
Prosite motif: PS00013 PROKAR_LIPOPROTEIN
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.0 %Cys (Translated Protein) 2.5 %Met (Translated Protein) 3.5 %Cys+Met (Translated Protein) 1.0 %Cys (Mature Protein) 2.5 %Met (Mature Protein) 3.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MWNNRIEFLLVSFFCICSLAFTGCQTKKQSDRYVVVLSMDGFRSDYPSRAHTPTLDSLAN CCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCEEEEEEECCCCCCCCCCCCCCCHHHHHH VGVRSTFRPCYPSVTFPNHYSMATGLHPDHHGLVNNFFYDAELDSSYRMGNLDPRFYGGE CCHHCCCCCCCCCCCCCCCCCHHCCCCCCCCHHHHHEEEECCCCCCCCCCCCCCCEECCC PIWNTAERQGVRTASFYWVGSEVPLASGQPSIWKPFDKSVSFSDRADSVISWLKLPEDIR CCCCCHHHCCCEEEEEEEECCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHCCCCCC PHLIMWYMEEPDAIGHSATPDSSATLDVVENLDKVLNHFFTEARKLDIFDKIDFIVLSDH CEEEEEEECCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCEEEECCC GMATYYPERYVNLNDYLPRDSFDYVFDGVPTLLYPKKTYVDTAYAILQKVPNITVWKKNE CCEEECCCCEECHHHCCCCCCCHHHHCCCCCEECCCHHHHHHHHHHHHHCCCCEEEECCC IPEKLVYGKNPRVSDLVVSPHIGTYVQFREKSSPRYAATHGYDNFTPEMEAIFYAAGPSF CCHHHHCCCCCCCCEEEECCCCCCEEEEECCCCCCEEEECCCCCCCCCEEEEEEECCCCH KKHVEVPQMANVNLYLMIARLLNIQPAPNDGDSAVVQRLFK HHHCCCCCCCCCHHHHHHHHHHCCCCCCCCCHHHHHHHHHC >Mature Secondary Structure MWNNRIEFLLVSFFCICSLAFTGCQTKKQSDRYVVVLSMDGFRSDYPSRAHTPTLDSLAN CCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCEEEEEEECCCCCCCCCCCCCCCHHHHHH VGVRSTFRPCYPSVTFPNHYSMATGLHPDHHGLVNNFFYDAELDSSYRMGNLDPRFYGGE CCHHCCCCCCCCCCCCCCCCCHHCCCCCCCCHHHHHEEEECCCCCCCCCCCCCCCEECCC PIWNTAERQGVRTASFYWVGSEVPLASGQPSIWKPFDKSVSFSDRADSVISWLKLPEDIR CCCCCHHHCCCEEEEEEEECCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHCCCCCC PHLIMWYMEEPDAIGHSATPDSSATLDVVENLDKVLNHFFTEARKLDIFDKIDFIVLSDH CEEEEEEECCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCEEEECCC GMATYYPERYVNLNDYLPRDSFDYVFDGVPTLLYPKKTYVDTAYAILQKVPNITVWKKNE CCEEECCCCEECHHHCCCCCCCHHHHCCCCCEECCCHHHHHHHHHHHHHCCCCEEEECCC IPEKLVYGKNPRVSDLVVSPHIGTYVQFREKSSPRYAATHGYDNFTPEMEAIFYAAGPSF CCHHHHCCCCCCCCEEEECCCCCCEEEEECCCCCCEEEECCCCCCCCCEEEEEEECCCCH KKHVEVPQMANVNLYLMIARLLNIQPAPNDGDSAVVQRLFK HHHCCCCCCCCCHHHHHHHHHHCCCCCCCCCHHHHHHHHHC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA