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The map label for this gene is ycjR [C]

Identifier: 150008911

GI number: 150008911

Start: 2703031

End: 2703879

Strand: Direct

Name: ycjR [C]

Synonym: BDI_2307

Alternate gene names: 150008911

Gene position: 2703031-2703879 (Clockwise)

Preceding gene: 150008910

Following gene: 150008914

Centisome position: 56.18

GC content: 49.0

Gene sequence:

>849_bases
ATGAATCCTACTTTCGGAGCTTCCATCCTTTCTTGGATACCACCTATGTGGACACCAGAAGGCGGTCTTTTCGCCATCCA
GCAAGCATCTGCCGCCGGTTTTGATTTACTGGAAATCTTATTGCCTCCTTCCATGGAGTTCGACGCTCCAACCGTAAAGC
GACAATTGAAACAACACGGATTGAAGGCGACTTGTTCTCTCAACCTTCCCCAAGAAGCGCATATTCCTTTTTATCCCAAG
GAAGCGACTCGCCTGATCAAGGCGGCGCTGGATAAAGCGAGCGAACTGGAGGTTGATTACTTGGGAGGGGTCTTACATTC
CGGCATCGGGGTCTTCTCCGGCAAACAGCGAACACGGGAAGAAGAGAATACGCTTTGTGAGGTATGGGCGGAGGTTGCCG
AATACGCCGGCCGATCCGGAATCACGATCGGTATAGAGCCGATCAATCGCTATGAAAGCTATATGTGTACCTCCGCGGAG
GAAGTCTTGCGCTTTATCAAATGCGTAGACGCTCCGAATTTATCTTTGCATCTGGATACTTTCCATATGAATATAGAAGA
GACTAGTTTCTATGAACCGGTTATCGCCGCAGGCAGCCGACTTCGCCATATTCACATGACTGAAAGCGACCGGGGAATGC
TGGGTGAAGGAAACGTACGCTGGGATGATTTGTTCCGGGGACTACAAGAAATCGATTTCAATGGAAACTTAGTTCTGGAG
AATTTCTCCAATTCCGTTCCCGGCATGGCGGTAGCCGTATCTCTTTGGCGTCCATCTAAATACAACGCAGATGAGCTAGC
TAAAGGCAGTCTCGCTTTCATGCGTAAGATGACATGCGAACATCAATAA

Upstream 100 bases:

>100_bases
CATTTATGATATTTCATTGCGAAGGATTTCACTTTCTTCGCAATGAAATCTTCAAAAAAGTACTTACTTTGTAACCCTAA
CGAATAAAAACAATACGATT

Downstream 100 bases:

>100_bases
GGCATCAATTACTGCAACCGGCTTTACAGTAGTACTGCAAGGCCCGTGCAGTAAATCTCCATTTAGAAAGTAGCGCGAAG
TCCTATCATTTAAATAACCG

Product: D-tagatose 3-epimerase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 282; Mature: 282

Protein sequence:

>282_residues
MNPTFGASILSWIPPMWTPEGGLFAIQQASAAGFDLLEILLPPSMEFDAPTVKRQLKQHGLKATCSLNLPQEAHIPFYPK
EATRLIKAALDKASELEVDYLGGVLHSGIGVFSGKQRTREEENTLCEVWAEVAEYAGRSGITIGIEPINRYESYMCTSAE
EVLRFIKCVDAPNLSLHLDTFHMNIEETSFYEPVIAAGSRLRHIHMTESDRGMLGEGNVRWDDLFRGLQEIDFNGNLVLE
NFSNSVPGMAVAVSLWRPSKYNADELAKGSLAFMRKMTCEHQ

Sequences:

>Translated_282_residues
MNPTFGASILSWIPPMWTPEGGLFAIQQASAAGFDLLEILLPPSMEFDAPTVKRQLKQHGLKATCSLNLPQEAHIPFYPK
EATRLIKAALDKASELEVDYLGGVLHSGIGVFSGKQRTREEENTLCEVWAEVAEYAGRSGITIGIEPINRYESYMCTSAE
EVLRFIKCVDAPNLSLHLDTFHMNIEETSFYEPVIAAGSRLRHIHMTESDRGMLGEGNVRWDDLFRGLQEIDFNGNLVLE
NFSNSVPGMAVAVSLWRPSKYNADELAKGSLAFMRKMTCEHQ
>Mature_282_residues
MNPTFGASILSWIPPMWTPEGGLFAIQQASAAGFDLLEILLPPSMEFDAPTVKRQLKQHGLKATCSLNLPQEAHIPFYPK
EATRLIKAALDKASELEVDYLGGVLHSGIGVFSGKQRTREEENTLCEVWAEVAEYAGRSGITIGIEPINRYESYMCTSAE
EVLRFIKCVDAPNLSLHLDTFHMNIEETSFYEPVIAAGSRLRHIHMTESDRGMLGEGNVRWDDLFRGLQEIDFNGNLVLE
NFSNSVPGMAVAVSLWRPSKYNADELAKGSLAFMRKMTCEHQ

Specific function: Unknown

COG id: COG1082

COG function: function code G; Sugar phosphate isomerases/epimerases

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the hyi family [H]

Homologues:

Organism=Escherichia coli, GI87081874, Length=107, Percent_Identity=28.9719626168224, Blast_Score=63, Evalue=2e-11,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR013022
- InterPro:   IPR012307 [H]

Pfam domain/function: PF01261 AP_endonuc_2 [H]

EC number: NA

Molecular weight: Translated: 31440; Mature: 31440

Theoretical pI: Translated: 4.94; Mature: 4.94

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.8 %Cys     (Translated Protein)
3.5 %Met     (Translated Protein)
5.3 %Cys+Met (Translated Protein)
1.8 %Cys     (Mature Protein)
3.5 %Met     (Mature Protein)
5.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNPTFGASILSWIPPMWTPEGGLFAIQQASAAGFDLLEILLPPSMEFDAPTVKRQLKQHG
CCCCHHHHHHHHCCCCCCCCCCEEEEECCCCCCHHHHHHHCCCCCCCCCHHHHHHHHHCC
LKATCSLNLPQEAHIPFYPKEATRLIKAALDKASELEVDYLGGVLHSGIGVFSGKQRTRE
CEEEEEECCCCCCCCCCCCHHHHHHHHHHHHHHHHCCHHHHHHHHHCCCCCCCCCHHHHH
EENTLCEVWAEVAEYAGRSGITIGIEPINRYESYMCTSAEEVLRFIKCVDAPNLSLHLDT
HHHHHHHHHHHHHHHCCCCCCEEECCCHHHHHHHHHCCHHHHHHHHHHCCCCCCEEEEEE
FHMNIEETSFYEPVIAAGSRLRHIHMTESDRGMLGEGNVRWDDLFRGLQEIDFNGNLVLE
EEECCCHHHHHHHHHHCCCCEEEEEECCCCCCCCCCCCCCHHHHHHHHHHCCCCCCEEEE
NFSNSVPGMAVAVSLWRPSKYNADELAKGSLAFMRKMTCEHQ
CCCCCCCCCEEEEEECCCCCCCHHHHHHHHHHHHHHHHCCCC
>Mature Secondary Structure
MNPTFGASILSWIPPMWTPEGGLFAIQQASAAGFDLLEILLPPSMEFDAPTVKRQLKQHG
CCCCHHHHHHHHCCCCCCCCCCEEEEECCCCCCHHHHHHHCCCCCCCCCHHHHHHHHHCC
LKATCSLNLPQEAHIPFYPKEATRLIKAALDKASELEVDYLGGVLHSGIGVFSGKQRTRE
CEEEEEECCCCCCCCCCCCHHHHHHHHHHHHHHHHCCHHHHHHHHHCCCCCCCCCHHHHH
EENTLCEVWAEVAEYAGRSGITIGIEPINRYESYMCTSAEEVLRFIKCVDAPNLSLHLDT
HHHHHHHHHHHHHHHCCCCCCEEECCCHHHHHHHHHCCHHHHHHHHHHCCCCCCEEEEEE
FHMNIEETSFYEPVIAAGSRLRHIHMTESDRGMLGEGNVRWDDLFRGLQEIDFNGNLVLE
EEECCCHHHHHHHHHHCCCCEEEEEECCCCCCCCCCCCCCHHHHHHHHHHCCCCCCEEEE
NFSNSVPGMAVAVSLWRPSKYNADELAKGSLAFMRKMTCEHQ
CCCCCCCCCEEEEEECCCCCCCHHHHHHHHHHHHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: DNA [C]

Specific reaction: Protein + DNA = Protein-DNA [C]

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA