| Definition | Parabacteroides distasonis ATCC 8503 chromosome, complete genome. |
|---|---|
| Accession | NC_009615 |
| Length | 4,811,379 |
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The map label for this gene is 150008909
Identifier: 150008909
GI number: 150008909
Start: 2701091
End: 2702584
Strand: Direct
Name: 150008909
Synonym: BDI_2305
Alternate gene names: NA
Gene position: 2701091-2702584 (Clockwise)
Preceding gene: 150008901
Following gene: 150008910
Centisome position: 56.14
GC content: 48.13
Gene sequence:
>1494_bases ATGAAAAGTAAAAAGACCGTCTTTCTGACCGGAGCCACCGGGACGATGGGCCATGCCGGATTGGTCGAGTTGTCCAAACG GCTAGATCGTTTTAATATAACACTCTTGGCTCGTCCGAGCAAAATCAATAAAGAGAAGTTGGCCACCTATGAGGCTATGC AAGGGATCCGTATCGTTTGGGGAGACTTGACGAGTTATCAAGATGTCTTAAATGGAGTAACGGGGGCGGACTACGTATTA CACGTAGGTGGAATGGTTTCGCCGGCGGCGGATTATTTCCCTAAAAAGACCTTGAAAGTAAACACGACCGCCGCTCAACA CATCGTGGATGCCGTAAAAGCGCAACCGAACGCAGATCAGATCAAGGTAGTCTATATCGGCTCCGTGGCGCAAACCGGCC ACCGTAACGCACCGGTTCATTGGGGACGTACGGGAGATCCGATCAATATAAGTGTCTATGATCATTATGCCATCTCAAAG ACAATAGCCGAACGTATTTTCGTGGAGTCGGGTATTAAACATTGGGCGTGCCTTCGCCAAACCGGTATCTTATGCCCCGA ATTATTATTCAAGGGTTCGGACCCAATCACATTCCACGTACCGCTAGACGGCGTGCTGGAATGGGCTACCGCCGAGGATT CCGGTCGCTTACTAGCGAATGTATGCGAGGAAGAGGTGCCGGATGAGTTTTGGAACCGTTTCTATAACATTAGTAGCGGC CCATCTTTCCGCCTGACGAATTATGAGTTTGAGAGTAAATTGTTAAAAGCGATCGGCTGTCCCGCCCCGGAGAAAATATT CGAACCGAACTGGTTCGCTATCCGTAATTTCCACGGACAATGGTATACCGATTCAGATCTATTAGAAGGATATCTGCATT TCCGCAGTAACCAAACTTGCGACGATTATTTTAAATGGATGGCCAGCCAAGTCCCTTGGTATTTCCACCTAGCAAAGATC GTCCCTCCTATCTTCATAAAACTGGGTATGGGAGCCATCGCTAAAAAGCCGGGACTGGGAACCCGTAACTGGATCAAGAA CAGACACCAAGATCGTATATCCGCCTATTTTGGCTCGTATGAGGATTGGCAAGCAATCCCGGGTTGGGATAAGATCCGGA CAAAACGCCCCTCCGAAACACCCGTCTTTCTGGATCATGGTTATGATGAAAGTAAGCCGAAGTCGGAATGGGATATCGAG GATATGCGTAAAGCCGCAGAATTCAGGGGAGGAAAATGCTTGTCCCCGGCCATGACAAAAGGAGACTTATCGACTCCGCT CGATTGGGAATGCCAATTCGGTCACCGTTTTAAGGCCTCTCCCACATTAGTATTATTAGGAGGCCATTGGTGCCCGGAAT GTTTACCGCTCCCTTGGAATTACGACGAGATCGCTAAAGGAAATCCGTTCTTTGCCCAAGTATGGTATCCATTCCACGAT AAAAAGGAACACAATGTATACGATGAATCCATATTCGCTGACTTCAAGGAATAA
Upstream 100 bases:
>100_bases CACTACAAAAGCTCTCAACCTATTGGTTGGGAGCTTTTTTTTATATACCTTCGCTACCCGATAGTATCCTAAGATTTTTA TTATACACTTAAATTATATC
Downstream 100 bases:
>100_bases AATTCAACGCATCAAGAGATTTTTGTTTTTTAGATTATTTATCTCAACGCAACATACTTTTACCGGATATTATCTGTTAT AACAATATAAGCACTATATA
Product: hypothetical protein
Products: NA
Alternate protein names: 3-Beta Hydroxysteroid Dehydrogenase/Isomerase; 3-Beta Hydroxysteroid Dehydrogenase/Isomerase Family; Nucleoside-Diphosphate-Sugar Epimerases
Number of amino acids: Translated: 497; Mature: 497
Protein sequence:
>497_residues MKSKKTVFLTGATGTMGHAGLVELSKRLDRFNITLLARPSKINKEKLATYEAMQGIRIVWGDLTSYQDVLNGVTGADYVL HVGGMVSPAADYFPKKTLKVNTTAAQHIVDAVKAQPNADQIKVVYIGSVAQTGHRNAPVHWGRTGDPINISVYDHYAISK TIAERIFVESGIKHWACLRQTGILCPELLFKGSDPITFHVPLDGVLEWATAEDSGRLLANVCEEEVPDEFWNRFYNISSG PSFRLTNYEFESKLLKAIGCPAPEKIFEPNWFAIRNFHGQWYTDSDLLEGYLHFRSNQTCDDYFKWMASQVPWYFHLAKI VPPIFIKLGMGAIAKKPGLGTRNWIKNRHQDRISAYFGSYEDWQAIPGWDKIRTKRPSETPVFLDHGYDESKPKSEWDIE DMRKAAEFRGGKCLSPAMTKGDLSTPLDWECQFGHRFKASPTLVLLGGHWCPECLPLPWNYDEIAKGNPFFAQVWYPFHD KKEHNVYDESIFADFKE
Sequences:
>Translated_497_residues MKSKKTVFLTGATGTMGHAGLVELSKRLDRFNITLLARPSKINKEKLATYEAMQGIRIVWGDLTSYQDVLNGVTGADYVL HVGGMVSPAADYFPKKTLKVNTTAAQHIVDAVKAQPNADQIKVVYIGSVAQTGHRNAPVHWGRTGDPINISVYDHYAISK TIAERIFVESGIKHWACLRQTGILCPELLFKGSDPITFHVPLDGVLEWATAEDSGRLLANVCEEEVPDEFWNRFYNISSG PSFRLTNYEFESKLLKAIGCPAPEKIFEPNWFAIRNFHGQWYTDSDLLEGYLHFRSNQTCDDYFKWMASQVPWYFHLAKI VPPIFIKLGMGAIAKKPGLGTRNWIKNRHQDRISAYFGSYEDWQAIPGWDKIRTKRPSETPVFLDHGYDESKPKSEWDIE DMRKAAEFRGGKCLSPAMTKGDLSTPLDWECQFGHRFKASPTLVLLGGHWCPECLPLPWNYDEIAKGNPFFAQVWYPFHD KKEHNVYDESIFADFKE >Mature_497_residues MKSKKTVFLTGATGTMGHAGLVELSKRLDRFNITLLARPSKINKEKLATYEAMQGIRIVWGDLTSYQDVLNGVTGADYVL HVGGMVSPAADYFPKKTLKVNTTAAQHIVDAVKAQPNADQIKVVYIGSVAQTGHRNAPVHWGRTGDPINISVYDHYAISK TIAERIFVESGIKHWACLRQTGILCPELLFKGSDPITFHVPLDGVLEWATAEDSGRLLANVCEEEVPDEFWNRFYNISSG PSFRLTNYEFESKLLKAIGCPAPEKIFEPNWFAIRNFHGQWYTDSDLLEGYLHFRSNQTCDDYFKWMASQVPWYFHLAKI VPPIFIKLGMGAIAKKPGLGTRNWIKNRHQDRISAYFGSYEDWQAIPGWDKIRTKRPSETPVFLDHGYDESKPKSEWDIE DMRKAAEFRGGKCLSPAMTKGDLSTPLDWECQFGHRFKASPTLVLLGGHWCPECLPLPWNYDEIAKGNPFFAQVWYPFHD KKEHNVYDESIFADFKE
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 56513; Mature: 56513
Theoretical pI: Translated: 7.26; Mature: 7.26
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.8 %Cys (Translated Protein) 1.6 %Met (Translated Protein) 3.4 %Cys+Met (Translated Protein) 1.8 %Cys (Mature Protein) 1.6 %Met (Mature Protein) 3.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKSKKTVFLTGATGTMGHAGLVELSKRLDRFNITLLARPSKINKEKLATYEAMQGIRIVW CCCCCEEEEECCCCCCCCHHHHHHHHHHCCEEEEEEECCCCCCHHHHHHHHHHCCCEEEE GDLTSYQDVLNGVTGADYVLHVGGMVSPAADYFPKKTLKVNTTAAQHIVDAVKAQPNADQ CCHHHHHHHHCCCCCCCHHEEECCCCCCHHHHCCCCEEEEECHHHHHHHHHHHCCCCCCC IKVVYIGSVAQTGHRNAPVHWGRTGDPINISVYDHYAISKTIAERIFVESGIKHWACLRQ EEEEEEECHHCCCCCCCCEECCCCCCCEEEEEECCHHHHHHHHHHHHHHHCHHHHHHHHH TGILCPELLFKGSDPITFHVPLDGVLEWATAEDSGRLLANVCEEEVPDEFWNRFYNISSG HCCCCHHHHHCCCCCEEEEECHHHHHEECCCCCCCHHHHHHHHHHCCHHHHHHHCCCCCC PSFRLTNYEFESKLLKAIGCPAPEKIFEPNWFAIRNFHGQWYTDSDLLEGYLHFRSNQTC CCEEEECCHHHHHHHHHHCCCCCHHHCCCCEEEEEECCCCCCCCHHHHHHHHHHCCCCCH DDYFKWMASQVPWYFHLAKIVPPIFIKLGMGAIAKKPGLGTRNWIKNRHQDRISAYFGSY HHHHHHHHHCCCHHHHHHHHHHHHHHHHCCCHHHCCCCCCCHHHHHHHHHHHHHHHHCCC EDWQAIPGWDKIRTKRPSETPVFLDHGYDESKPKSEWDIEDMRKAAEFRGGKCLSPAMTK CCCCCCCCHHHHCCCCCCCCCEEEECCCCCCCCCCCCCHHHHHHHHHHCCCCCCCCCCCC GDLSTPLDWECQFGHRFKASPTLVLLGGHWCPECLPLPWNYDEIAKGNPFFAQVWYPFHD CCCCCCCCCEECCCCEECCCCEEEEECCCCCCCCCCCCCCHHHHCCCCCEEEEEEECCCC KKEHNVYDESIFADFKE CCCCCCHHHHHHHCCCC >Mature Secondary Structure MKSKKTVFLTGATGTMGHAGLVELSKRLDRFNITLLARPSKINKEKLATYEAMQGIRIVW CCCCCEEEEECCCCCCCCHHHHHHHHHHCCEEEEEEECCCCCCHHHHHHHHHHCCCEEEE GDLTSYQDVLNGVTGADYVLHVGGMVSPAADYFPKKTLKVNTTAAQHIVDAVKAQPNADQ CCHHHHHHHHCCCCCCCHHEEECCCCCCHHHHCCCCEEEEECHHHHHHHHHHHCCCCCCC IKVVYIGSVAQTGHRNAPVHWGRTGDPINISVYDHYAISKTIAERIFVESGIKHWACLRQ EEEEEEECHHCCCCCCCCEECCCCCCCEEEEEECCHHHHHHHHHHHHHHHCHHHHHHHHH TGILCPELLFKGSDPITFHVPLDGVLEWATAEDSGRLLANVCEEEVPDEFWNRFYNISSG HCCCCHHHHHCCCCCEEEEECHHHHHEECCCCCCCHHHHHHHHHHCCHHHHHHHCCCCCC PSFRLTNYEFESKLLKAIGCPAPEKIFEPNWFAIRNFHGQWYTDSDLLEGYLHFRSNQTC CCEEEECCHHHHHHHHHHCCCCCHHHCCCCEEEEEECCCCCCCCHHHHHHHHHHCCCCCH DDYFKWMASQVPWYFHLAKIVPPIFIKLGMGAIAKKPGLGTRNWIKNRHQDRISAYFGSY HHHHHHHHHCCCHHHHHHHHHHHHHHHHCCCHHHCCCCCCCHHHHHHHHHHHHHHHHCCC EDWQAIPGWDKIRTKRPSETPVFLDHGYDESKPKSEWDIEDMRKAAEFRGGKCLSPAMTK CCCCCCCCHHHHCCCCCCCCCEEEECCCCCCCCCCCCCHHHHHHHHHHCCCCCCCCCCCC GDLSTPLDWECQFGHRFKASPTLVLLGGHWCPECLPLPWNYDEIAKGNPFFAQVWYPFHD CCCCCCCCCEECCCCEECCCCEEEEECCCCCCCCCCCCCCHHHHCCCCCEEEEEEECCCC KKEHNVYDESIFADFKE CCCCCCHHHHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA