Definition Parabacteroides distasonis ATCC 8503 chromosome, complete genome.
Accession NC_009615
Length 4,811,379

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The map label for this gene is 150008839

Identifier: 150008839

GI number: 150008839

Start: 2617793

End: 2619007

Strand: Reverse

Name: 150008839

Synonym: BDI_2229

Alternate gene names: NA

Gene position: 2619007-2617793 (Counterclockwise)

Preceding gene: 150008840

Following gene: 150008837

Centisome position: 54.43

GC content: 56.54

Gene sequence:

>1215_bases
ATGGCAACAATCAAAACCAAATTCAGGTCCTCGTCCGTGGAAGGCAGGGAGGGGACGCTCTATTTCCAGGTCATCCACGG
AAGGGTGGCGCGCCAGATAAACACCGGTTACAGGCTGTTCCCTTCGGAATGGGACGGACGCACGTCGGAAATCATACTGC
CGGTATCCGGTGATGCCAGAAGAAGCCTCCTGCTCGCGTTAAAGGAGCGGATGGAAAAAGACATCCGCCGTCTGGAAAGT
ATCATCGCCGGACTGGAACGTTCCGGCGGTACCTATCCCGCCGGCAGGGTTGTCGAACTTTTTCACAACCCGCCCCCTGA
GGACAGCCATAATTTCATGGCCTTCGGAAAGAGGCTCGTGGAGGAACTGGAGCGTGTCGGCAAGAAGCGCACCGCCGAGA
GGTACACCACCGTACTGAACAGCTTCACGCACTTCCGGGGCAGGGACGGCGACATCCCGCTGGAGGATATCGGCTCCACC
CTCATGCTGGAATACGAGGCATGGCTGAAGGACAAGGGGATATGTCCGAACAGCACCTCCTATTACATGCGGAACCTGCG
TGCCGTCTACAACCGTGCGGTGGACAGGGAACTGACGGTACAGCGCAGCCCTTTCAAGCATGTCTACACCGGAATAGACA
AGACCGTAAAACGTGCTGTTCCATTGAAAGCGGTCCGCATGATACGTGACCTGGACCTGCGCCTTTCCCCGGGCATGGAA
TACGCCAGGGACATGTTCATGCTGAGCTTTTATACTCGGGGCATGTCGTTCGTCGACATCGCCTACCTGAAAAAGGCAGA
TCTGAAGAGCGGCGTGCTGACCTACCGCAGGCGGAAGACCGGCCGGCGTCTGTCCATTAAATGGGAGAAGCCCATGCAGG
AGATCCTGGACAGGTATGGCCACAATGACAGCCCCTACCTTTTTCCGGTCATCAGGGATACGGCCAAGGATGCCGTGCGG
CAGTACAGGAGCGCAGCGCATTTCATCAACGGAAAACTCAAGGAACTCGGGAAACGGCTCGGGCTCGGCATGCCGCTCAC
CATGTATGTAGCGCGCCATGCATGGGCGAGTATTGCCAGAAGCAAGAATGTGCCGCTGGCAACCATCAGCGAGGCGATGG
GACATGATTCGGAAAACACGACCAGAATCTACCTCGCCTCGCTGGACACCTCACAAGTGGACAAGGCAAACGACATCATA
CTCAAATCCTTATAA

Upstream 100 bases:

>100_bases
GAAATGGCGGCCTACAAGGACAGTCTGGCGCACCGGCTGTTCAGGGAGGCACAGGAAATCAGGAAGCAACTGGACAATCC
TAATTCAAAATGACTGCACT

Downstream 100 bases:

>100_bases
CGGGGACGGATGCGGCACGTAGAATAACGGACAAAGGCTGTGCCGTTCCTGCTTCTCTTTTTAAGAGAAATATTACACAT
TGCAAAGATAATCAAAATAT

Product: transposase

Products: NA

Alternate protein names: Transposase; Tyrosine Type Site-Specific Recombinase; Tyrosine Site-Specific Recombinase; Integrase Family Protein; Phage Integrase Family Protein; Site-Specific Recombinase Phage Integrase Family; Site-Specific Recombinase IntIA; Integrase/Site-Specific Recombinase; Recombinase/Integrase; Bacteriophage Integrase; LOW QUALITY PROTEIN Tyrosine Recombinase; Integrase/Transposase

Number of amino acids: Translated: 404; Mature: 403

Protein sequence:

>404_residues
MATIKTKFRSSSVEGREGTLYFQVIHGRVARQINTGYRLFPSEWDGRTSEIILPVSGDARRSLLLALKERMEKDIRRLES
IIAGLERSGGTYPAGRVVELFHNPPPEDSHNFMAFGKRLVEELERVGKKRTAERYTTVLNSFTHFRGRDGDIPLEDIGST
LMLEYEAWLKDKGICPNSTSYYMRNLRAVYNRAVDRELTVQRSPFKHVYTGIDKTVKRAVPLKAVRMIRDLDLRLSPGME
YARDMFMLSFYTRGMSFVDIAYLKKADLKSGVLTYRRRKTGRRLSIKWEKPMQEILDRYGHNDSPYLFPVIRDTAKDAVR
QYRSAAHFINGKLKELGKRLGLGMPLTMYVARHAWASIARSKNVPLATISEAMGHDSENTTRIYLASLDTSQVDKANDII
LKSL

Sequences:

>Translated_404_residues
MATIKTKFRSSSVEGREGTLYFQVIHGRVARQINTGYRLFPSEWDGRTSEIILPVSGDARRSLLLALKERMEKDIRRLES
IIAGLERSGGTYPAGRVVELFHNPPPEDSHNFMAFGKRLVEELERVGKKRTAERYTTVLNSFTHFRGRDGDIPLEDIGST
LMLEYEAWLKDKGICPNSTSYYMRNLRAVYNRAVDRELTVQRSPFKHVYTGIDKTVKRAVPLKAVRMIRDLDLRLSPGME
YARDMFMLSFYTRGMSFVDIAYLKKADLKSGVLTYRRRKTGRRLSIKWEKPMQEILDRYGHNDSPYLFPVIRDTAKDAVR
QYRSAAHFINGKLKELGKRLGLGMPLTMYVARHAWASIARSKNVPLATISEAMGHDSENTTRIYLASLDTSQVDKANDII
LKSL
>Mature_403_residues
ATIKTKFRSSSVEGREGTLYFQVIHGRVARQINTGYRLFPSEWDGRTSEIILPVSGDARRSLLLALKERMEKDIRRLESI
IAGLERSGGTYPAGRVVELFHNPPPEDSHNFMAFGKRLVEELERVGKKRTAERYTTVLNSFTHFRGRDGDIPLEDIGSTL
MLEYEAWLKDKGICPNSTSYYMRNLRAVYNRAVDRELTVQRSPFKHVYTGIDKTVKRAVPLKAVRMIRDLDLRLSPGMEY
ARDMFMLSFYTRGMSFVDIAYLKKADLKSGVLTYRRRKTGRRLSIKWEKPMQEILDRYGHNDSPYLFPVIRDTAKDAVRQ
YRSAAHFINGKLKELGKRLGLGMPLTMYVARHAWASIARSKNVPLATISEAMGHDSENTTRIYLASLDTSQVDKANDIIL
KSL

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 46313; Mature: 46182

Theoretical pI: Translated: 10.41; Mature: 10.41

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.2 %Cys     (Translated Protein)
3.5 %Met     (Translated Protein)
3.7 %Cys+Met (Translated Protein)
0.2 %Cys     (Mature Protein)
3.2 %Met     (Mature Protein)
3.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MATIKTKFRSSSVEGREGTLYFQVIHGRVARQINTGYRLFPSEWDGRTSEIILPVSGDAR
CCCCCCCCCCCCCCCCCCEEEEEEHHHHHHHHHCCCCEECCCCCCCCCCEEEEECCCCHH
RSLLLALKERMEKDIRRLESIIAGLERSGGTYPAGRVVELFHNPPPEDSHNFMAFGKRLV
HHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHCCCCCCCCCHHHHHHHHHH
EELERVGKKRTAERYTTVLNSFTHFRGRDGDIPLEDIGSTLMLEYEAWLKDKGICPNSTS
HHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHCCCCEEEHHHHHHCCCCCCCCCHH
YYMRNLRAVYNRAVDRELTVQRSPFKHVYTGIDKTVKRAVPLKAVRMIRDLDLRLSPGME
HHHHHHHHHHHHHHCCHHCCCCCCHHHHHHHHHHHHHHHCCHHHHHHHHHCCCCCCCCHH
YARDMFMLSFYTRGMSFVDIAYLKKADLKSGVLTYRRRKTGRRLSIKWEKPMQEILDRYG
HHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEEHHHHHHHHHHHC
HNDSPYLFPVIRDTAKDAVRQYRSAAHFINGKLKELGKRLGLGMPLTMYVARHAWASIAR
CCCCCEEEHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHCCCCCHHHHHHHHHHHHHHH
SKNVPLATISEAMGHDSENTTRIYLASLDTSQVDKANDIILKSL
CCCCCHHHHHHHHCCCCCCCEEEEEEECCCHHCCCCCCHHCCCC
>Mature Secondary Structure 
ATIKTKFRSSSVEGREGTLYFQVIHGRVARQINTGYRLFPSEWDGRTSEIILPVSGDAR
CCCCCCCCCCCCCCCCCEEEEEEHHHHHHHHHCCCCEECCCCCCCCCCEEEEECCCCHH
RSLLLALKERMEKDIRRLESIIAGLERSGGTYPAGRVVELFHNPPPEDSHNFMAFGKRLV
HHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHCCCCCCCCCHHHHHHHHHH
EELERVGKKRTAERYTTVLNSFTHFRGRDGDIPLEDIGSTLMLEYEAWLKDKGICPNSTS
HHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHCCCCEEEHHHHHHCCCCCCCCCHH
YYMRNLRAVYNRAVDRELTVQRSPFKHVYTGIDKTVKRAVPLKAVRMIRDLDLRLSPGME
HHHHHHHHHHHHHHCCHHCCCCCCHHHHHHHHHHHHHHHCCHHHHHHHHHCCCCCCCCHH
YARDMFMLSFYTRGMSFVDIAYLKKADLKSGVLTYRRRKTGRRLSIKWEKPMQEILDRYG
HHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEEHHHHHHHHHHHC
HNDSPYLFPVIRDTAKDAVRQYRSAAHFINGKLKELGKRLGLGMPLTMYVARHAWASIAR
CCCCCEEEHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHCCCCCHHHHHHHHHHHHHHH
SKNVPLATISEAMGHDSENTTRIYLASLDTSQVDKANDIILKSL
CCCCCHHHHHHHHCCCCCCCEEEEEEECCCHHCCCCCCHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA