| Definition | Parabacteroides distasonis ATCC 8503 chromosome, complete genome. |
|---|---|
| Accession | NC_009615 |
| Length | 4,811,379 |
Click here to switch to the map view.
The map label for this gene is 150008836
Identifier: 150008836
GI number: 150008836
Start: 2616454
End: 2617014
Strand: Reverse
Name: 150008836
Synonym: BDI_2226
Alternate gene names: NA
Gene position: 2617014-2616454 (Counterclockwise)
Preceding gene: 150008837
Following gene: 150008835
Centisome position: 54.39
GC content: 49.38
Gene sequence:
>561_bases ATGGGTATGAGTTTTTCTACGGCGGAAGAAAAAAAGCAGGTCCGCTGGTTCGTCATGCGCGCCTACAAGAATGAGAAAAT GGCGGAGGACAGGCTGAAGGACAAGGAATACGGTCTAGAATATTTCATTCCGAAACATTACGCCGTAAGGACTTACCACG GGGTGAAGTCGACAAGGCTAGTGCCGGTCATACCGAGTCTGGTTTTCGTCCACGCCAGCCACTCGCAGATCACCGAATTC AAGAAACGGTACAACTTCCTGCAATTCGCCATGTGGGAAAAAAGCACGGGTATGGAATATATCACCGTGCCGGACGACCA GATGGACAGTTTCATCCAAATAGCTTCCCTGCATGAGAAGGATACGGCCTATTATAAGCCGGATGAAATCGACGTACGGA AAGGTACCCGTGTATGTATTCACGGCGGCAAGCTTGATGGAGTTAAGGGTGTGTTTATGCGGGTAAAAGGGAAACGCAAC CGCCGAGTGGTCGTAATGCTTGAGGGGATTATGGGGATATCGGCTGAGGTTCATCCCGATTTGATTGAAGTCATTTCCTG A
Upstream 100 bases:
>100_bases TATTATGAATAAAGGAAATGTAATCCGTTGTAATACATACCAATATACGAATTGGCATGAACTAGGGGTATATCCTCACC TATAAAATAGTCCCGGCAAT
Downstream 100 bases:
>100_bases TATGGAAAAGTCTGGAATCCTCATTCACGGTTTTACGCAAATAAAAAACAATATCTGAATATATGTATTTTTGGATTGTA AATTGTTCACTGGCATTTTT
Product: putative transcriptional regulator UpxY-like protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 186; Mature: 185
Protein sequence:
>186_residues MGMSFSTAEEKKQVRWFVMRAYKNEKMAEDRLKDKEYGLEYFIPKHYAVRTYHGVKSTRLVPVIPSLVFVHASHSQITEF KKRYNFLQFAMWEKSTGMEYITVPDDQMDSFIQIASLHEKDTAYYKPDEIDVRKGTRVCIHGGKLDGVKGVFMRVKGKRN RRVVVMLEGIMGISAEVHPDLIEVIS
Sequences:
>Translated_186_residues MGMSFSTAEEKKQVRWFVMRAYKNEKMAEDRLKDKEYGLEYFIPKHYAVRTYHGVKSTRLVPVIPSLVFVHASHSQITEF KKRYNFLQFAMWEKSTGMEYITVPDDQMDSFIQIASLHEKDTAYYKPDEIDVRKGTRVCIHGGKLDGVKGVFMRVKGKRN RRVVVMLEGIMGISAEVHPDLIEVIS >Mature_185_residues GMSFSTAEEKKQVRWFVMRAYKNEKMAEDRLKDKEYGLEYFIPKHYAVRTYHGVKSTRLVPVIPSLVFVHASHSQITEFK KRYNFLQFAMWEKSTGMEYITVPDDQMDSFIQIASLHEKDTAYYKPDEIDVRKGTRVCIHGGKLDGVKGVFMRVKGKRNR RVVVMLEGIMGISAEVHPDLIEVIS
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 21615; Mature: 21484
Theoretical pI: Translated: 9.73; Mature: 9.73
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.5 %Cys (Translated Protein) 5.4 %Met (Translated Protein) 5.9 %Cys+Met (Translated Protein) 0.5 %Cys (Mature Protein) 4.9 %Met (Mature Protein) 5.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MGMSFSTAEEKKQVRWFVMRAYKNEKMAEDRLKDKEYGLEYFIPKHYAVRTYHGVKSTRL CCCCCCCHHHHHHHHHHHHHHHCCCHHHHHHHCHHHCCEEEECCCCEEEEEECCCCCCEE VPVIPSLVFVHASHSQITEFKKRYNFLQFAMWEKSTGMEYITVPDDQMDSFIQIASLHEK HEECCCEEEEECCHHHHHHHHHHHHHHHHEEECCCCCCEEEECCCHHHHHHHHHHHHCCC DTAYYKPDEIDVRKGTRVCIHGGKLDGVKGVFMRVKGKRNRRVVVMLEGIMGISAEVHPD CCCEECCCCEEECCCCEEEEECCCCCCCEEEEEEEECCCCCEEEEEEECCCCCCCCCCHH LIEVIS HHHHCC >Mature Secondary Structure GMSFSTAEEKKQVRWFVMRAYKNEKMAEDRLKDKEYGLEYFIPKHYAVRTYHGVKSTRL CCCCCCHHHHHHHHHHHHHHHCCCHHHHHHHCHHHCCEEEECCCCEEEEEECCCCCCEE VPVIPSLVFVHASHSQITEFKKRYNFLQFAMWEKSTGMEYITVPDDQMDSFIQIASLHEK HEECCCEEEEECCHHHHHHHHHHHHHHHHEEECCCCCCEEEECCCHHHHHHHHHHHHCCC DTAYYKPDEIDVRKGTRVCIHGGKLDGVKGVFMRVKGKRNRRVVVMLEGIMGISAEVHPD CCCEECCCCEEECCCCEEEEECCCCCCCEEEEEEEECCCCCEEEEEEECCCCCCCCCCHH LIEVIS HHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA