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The map label for this gene is capC [H]

Identifier: 150008832

GI number: 150008832

Start: 2611257

End: 2612030

Strand: Reverse

Name: capC [H]

Synonym: BDI_2222

Alternate gene names: 150008832

Gene position: 2612030-2611257 (Counterclockwise)

Preceding gene: 150008833

Following gene: 150008831

Centisome position: 54.29

GC content: 47.42

Gene sequence:

>774_bases
ATGGTTGGTTGTCAAATAATTAAAAAAAATAGATATCCTATACAAAAAACAGACATTGTCGTGTGGTGTTTTAGGAAACG
TATCCCACTGAAAGATAGCGGTATATTCGAGGGGTTTACCGACTGGCATTCGCACATCCTGCCGGGTGTGGACGACGGGG
TGCAGACGATGCAGGAATCCTTGCAAGTTCTCTCCCATTATGAGGAGTTGGGTATCAGCGAGGTTTGGCTGACACCCCAC
ATCATGGAGGACATTTCGAACCGTACGGAGGATTTGAAACAACGGTTTATGGAACTGAATGCCGCCTATCAAGGCAAAAT
CACTCTTCACCTTGCTGCGGAAAACATGCTCGACAACCTGTTTGAAGAGCGGCTCGCGAAGAATGACCTGCTTCCTTTGG
GGAAGGAAGGGAAACACCTGTTGGTGGAAACCTCTTATTTTAACCCACCGATGGGGTTGAACAACATCCTGCTCCGCATC
AAGTCGAAAGGCTATGTCCCCGTCCTGGCACATCCCGAACGGTATGTGTATATGGATGAAAGTGATTACCGGCAACTGAA
AGGGATGAACGTACTCTTCCAGCTCAATTTGTCCAGCATCGTTGGTGGCTACGGGTCGGAAGTCAAAAAGAAAGCCGAAT
GGCTGTTGAAGAACGGCTTCTATTACTTGACTGGCAGTGACACTCATTGTCTTGCAGCTTGGGAAACAACCATAGCGAGG
AAGTCAACTAAAATCGAAGACTTGCCACTGAAAAACAGGGGCATGCTTTTGTAG

Upstream 100 bases:

>100_bases
CGGTGGTCGCTACGGATACCGTTACGGCTACCGCTATGGTTATCACTACGGTTACGGTTCGGGATACCATTATGGCTCGG
ATAAAAAACGGGGGGGGTAA

Downstream 100 bases:

>100_bases
GTTCCAAATCGTGATGACCCACAATCAATGCTTTAGGGAATCTGCGGTGCAAGTCCGCAAGCAACCGTTCCAAAGCCTTC
TTTTGGGCAGGTGTTCGGGT

Product: capsular polysaccharide biosynthesis protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 257; Mature: 257

Protein sequence:

>257_residues
MVGCQIIKKNRYPIQKTDIVVWCFRKRIPLKDSGIFEGFTDWHSHILPGVDDGVQTMQESLQVLSHYEELGISEVWLTPH
IMEDISNRTEDLKQRFMELNAAYQGKITLHLAAENMLDNLFEERLAKNDLLPLGKEGKHLLVETSYFNPPMGLNNILLRI
KSKGYVPVLAHPERYVYMDESDYRQLKGMNVLFQLNLSSIVGGYGSEVKKKAEWLLKNGFYYLTGSDTHCLAAWETTIAR
KSTKIEDLPLKNRGMLL

Sequences:

>Translated_257_residues
MVGCQIIKKNRYPIQKTDIVVWCFRKRIPLKDSGIFEGFTDWHSHILPGVDDGVQTMQESLQVLSHYEELGISEVWLTPH
IMEDISNRTEDLKQRFMELNAAYQGKITLHLAAENMLDNLFEERLAKNDLLPLGKEGKHLLVETSYFNPPMGLNNILLRI
KSKGYVPVLAHPERYVYMDESDYRQLKGMNVLFQLNLSSIVGGYGSEVKKKAEWLLKNGFYYLTGSDTHCLAAWETTIAR
KSTKIEDLPLKNRGMLL
>Mature_257_residues
MVGCQIIKKNRYPIQKTDIVVWCFRKRIPLKDSGIFEGFTDWHSHILPGVDDGVQTMQESLQVLSHYEELGISEVWLTPH
IMEDISNRTEDLKQRFMELNAAYQGKITLHLAAENMLDNLFEERLAKNDLLPLGKEGKHLLVETSYFNPPMGLNNILLRI
KSKGYVPVLAHPERYVYMDESDYRQLKGMNVLFQLNLSSIVGGYGSEVKKKAEWLLKNGFYYLTGSDTHCLAAWETTIAR
KSTKIEDLPLKNRGMLL

Specific function: Required for the biosynthesis of type 1 capsular polysaccharide [H]

COG id: COG4464

COG function: function code GM; Capsular polysaccharide biosynthesis protein

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the CpsB/CapC family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR016667
- InterPro:   IPR004013
- InterPro:   IPR016195 [H]

Pfam domain/function: PF02811 PHP [H]

EC number: =3.1.3.48 [H]

Molecular weight: Translated: 29564; Mature: 29564

Theoretical pI: Translated: 7.25; Mature: 7.25

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.2 %Cys     (Translated Protein)
3.5 %Met     (Translated Protein)
4.7 %Cys+Met (Translated Protein)
1.2 %Cys     (Mature Protein)
3.5 %Met     (Mature Protein)
4.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MVGCQIIKKNRYPIQKTDIVVWCFRKRIPLKDSGIFEGFTDWHSHILPGVDDGVQTMQES
CCCCEEEECCCCCCCCCCEEEEEECCCCCCCCCCCCCCHHHHHHHCCCCCCHHHHHHHHH
LQVLSHYEELGISEVWLTPHIMEDISNRTEDLKQRFMELNAAYQGKITLHLAAENMLDNL
HHHHHHHHHCCCCEEECCHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEEEEHHHHHHHH
FEERLAKNDLLPLGKEGKHLLVETSYFNPPMGLNNILLRIKSKGYVPVLAHPERYVYMDE
HHHHHHHCCCCCCCCCCCEEEEEECCCCCCCCCCCEEEEECCCCCEEEEECCCEEEEECC
SDYRQLKGMNVLFQLNLSSIVGGYGSEVKKKAEWLLKNGFYYLTGSDTHCLAAWETTIAR
HHHHHHCCCEEEEEEEHHHHHCCCCHHHHHHHHHHHHCCEEEEECCCCEEEEHHHHHHHH
KSTKIEDLPLKNRGMLL
CCCCCCCCCCCCCCCCC
>Mature Secondary Structure
MVGCQIIKKNRYPIQKTDIVVWCFRKRIPLKDSGIFEGFTDWHSHILPGVDDGVQTMQES
CCCCEEEECCCCCCCCCCEEEEEECCCCCCCCCCCCCCHHHHHHHCCCCCCHHHHHHHHH
LQVLSHYEELGISEVWLTPHIMEDISNRTEDLKQRFMELNAAYQGKITLHLAAENMLDNL
HHHHHHHHHCCCCEEECCHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEEEEHHHHHHHH
FEERLAKNDLLPLGKEGKHLLVETSYFNPPMGLNNILLRIKSKGYVPVLAHPERYVYMDE
HHHHHHHCCCCCCCCCCCEEEEEECCCCCCCCCCCEEEEECCCCCEEEEECCCEEEEECC
SDYRQLKGMNVLFQLNLSSIVGGYGSEVKKKAEWLLKNGFYYLTGSDTHCLAAWETTIAR
HHHHHHCCCEEEEEEEHHHHHCCCCHHHHHHHHHHHHCCEEEEECCCCEEEEHHHHHHHH
KSTKIEDLPLKNRGMLL
CCCCCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 7961465 [H]