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The map label for this gene is yibD [H]

Identifier: 150008821

GI number: 150008821

Start: 2599657

End: 2600646

Strand: Reverse

Name: yibD [H]

Synonym: BDI_2211

Alternate gene names: 150008821

Gene position: 2600646-2599657 (Counterclockwise)

Preceding gene: 150008822

Following gene: 150008820

Centisome position: 54.05

GC content: 31.21

Gene sequence:

>990_bases
ATGAATACAGAATTATTGACATCTATTATAATTCCATGTTATAATGCGGAAAAGTATATCCATAAATGCCTTGAAAGTTG
TTTGAATCAAAGACTTGATTATAATACTTTTGAAATCATAGCAATTGATGACGGAAGTGAAGACAACACTCTGAATATCT
TACATGAATTTGCACACAATAATCCACAACTACATATGCAAATTCTTACACAAAAAAATGCCGGACAATCCAGAGCACGC
AATCATGGGTTGGAATATGCACATGGGAAATATATTTTATATTTAGATAGTGATGACTTTTTTGTAGATAACACCATATC
TGAAATTTTATATACAGCCATTGACAACCAACTGGATATGCTTTGGTTTGACCATCAACACGTAGATGAAAATTACAACT
TATTGCCATTGCCACAGGCCGACTGCAAAAAACATGTTCCTACTGATATAATGTCTGGGATAGACTTTATTAAAAAGGCA
TTTAACCATTCAGGCATGGTGTGGCAGTTTATATTTCGTAAAGATTTTCTTATTAAGAACAATATCCTTTTTTTTGATGG
TATAATAATGCAAGATATTGTATACACGCTTCAATGTCTGTACAAATGTAAGAGAGTACAATATTATCCTATATGTGCAT
ATAACTATTTGATACGATCAAATTCTGTGACGAGAGATATGCTAAAAAAAAGAAAACGCTCATTGGATGGTATGAAAGTA
GCGGCACTACTCAACGATACATTTGCAACCTCAAAAGATAACGATTTACGGCTTTGGATAAATGATTTTATGAATGGTAT
CGTGCAATTTAATTTAAGGAGATTAGTGAAAAATAATGATAATACAGGGTATGAACTTTGCATTTCAGAACTAAAGCGAT
ATAATCTTCTTCCATTACCAATGTCATTTATTTGCAGACAGATTTTTTTGACTAAAATATTAAATTTCAGCCCAATACTA
TATAAACAGGTAGTAAAGTTATTACATTAA

Upstream 100 bases:

>100_bases
CGCTGGAACTTAAAACTCTTATTGAGAAAGGCTATCAAAAAGTACAGACCGGTGGATTTGATTACGAATCAATTATAAGA
AATTTGCTAACAAAAATAAT

Downstream 100 bases:

>100_bases
TTATAGTACAATCTACATTTGTTCGCTTTATGGATAAACTGTCTATTATGCATTATTTCCCGATAGATTATTTCCCTCCG
GTGATGAATCTAATTGATGC

Product: glycosyl transferase family protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 329; Mature: 329

Protein sequence:

>329_residues
MNTELLTSIIIPCYNAEKYIHKCLESCLNQRLDYNTFEIIAIDDGSEDNTLNILHEFAHNNPQLHMQILTQKNAGQSRAR
NHGLEYAHGKYILYLDSDDFFVDNTISEILYTAIDNQLDMLWFDHQHVDENYNLLPLPQADCKKHVPTDIMSGIDFIKKA
FNHSGMVWQFIFRKDFLIKNNILFFDGIIMQDIVYTLQCLYKCKRVQYYPICAYNYLIRSNSVTRDMLKKRKRSLDGMKV
AALLNDTFATSKDNDLRLWINDFMNGIVQFNLRRLVKNNDNTGYELCISELKRYNLLPLPMSFICRQIFLTKILNFSPIL
YKQVVKLLH

Sequences:

>Translated_329_residues
MNTELLTSIIIPCYNAEKYIHKCLESCLNQRLDYNTFEIIAIDDGSEDNTLNILHEFAHNNPQLHMQILTQKNAGQSRAR
NHGLEYAHGKYILYLDSDDFFVDNTISEILYTAIDNQLDMLWFDHQHVDENYNLLPLPQADCKKHVPTDIMSGIDFIKKA
FNHSGMVWQFIFRKDFLIKNNILFFDGIIMQDIVYTLQCLYKCKRVQYYPICAYNYLIRSNSVTRDMLKKRKRSLDGMKV
AALLNDTFATSKDNDLRLWINDFMNGIVQFNLRRLVKNNDNTGYELCISELKRYNLLPLPMSFICRQIFLTKILNFSPIL
YKQVVKLLH
>Mature_329_residues
MNTELLTSIIIPCYNAEKYIHKCLESCLNQRLDYNTFEIIAIDDGSEDNTLNILHEFAHNNPQLHMQILTQKNAGQSRAR
NHGLEYAHGKYILYLDSDDFFVDNTISEILYTAIDNQLDMLWFDHQHVDENYNLLPLPQADCKKHVPTDIMSGIDFIKKA
FNHSGMVWQFIFRKDFLIKNNILFFDGIIMQDIVYTLQCLYKCKRVQYYPICAYNYLIRSNSVTRDMLKKRKRSLDGMKV
AALLNDTFATSKDNDLRLWINDFMNGIVQFNLRRLVKNNDNTGYELCISELKRYNLLPLPMSFICRQIFLTKILNFSPIL
YKQVVKLLH

Specific function: Unknown

COG id: COG0463

COG function: function code M; Glycosyltransferases involved in cell wall biogenesis

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the glycosyltransferase 2 family [H]

Homologues:

Organism=Escherichia coli, GI1790044, Length=234, Percent_Identity=32.4786324786325, Blast_Score=134, Evalue=1e-32,
Organism=Escherichia coli, GI1787259, Length=91, Percent_Identity=39.5604395604396, Blast_Score=66, Evalue=4e-12,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001173 [H]

Pfam domain/function: PF00535 Glycos_transf_2 [H]

EC number: 2.-.-.- [C]

Molecular weight: Translated: 38711; Mature: 38711

Theoretical pI: Translated: 7.52; Mature: 7.52

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.7 %Cys     (Translated Protein)
3.0 %Met     (Translated Protein)
5.8 %Cys+Met (Translated Protein)
2.7 %Cys     (Mature Protein)
3.0 %Met     (Mature Protein)
5.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNTELLTSIIIPCYNAEKYIHKCLESCLNQRLDYNTFEIIAIDDGSEDNTLNILHEFAHN
CCHHHHHHHHHCCCCHHHHHHHHHHHHHHCCCCCCCEEEEEECCCCCCCHHHHHHHHHCC
NPQLHMQILTQKNAGQSRARNHGLEYAHGKYILYLDSDDFFVDNTISEILYTAIDNQLDM
CCCEEEEEEECCCCCHHHHHHCCCCEECCEEEEEECCCCCEEHHHHHHHHHHHHCCCHHE
LWFDHQHVDENYNLLPLPQADCKKHVPTDIMSGIDFIKKAFNHSGMVWQFIFRKDFLIKN
EEECCHHCCCCCCEECCCHHHHHHCCCHHHHHHHHHHHHHHCCCCCEEHHHHHHCCEEEC
NILFFDGIIMQDIVYTLQCLYKCKRVQYYPICAYNYLIRSNSVTRDMLKKRKRSLDGMKV
CEEEEHHHHHHHHHHHHHHHHHHHHCEECEEHHHHHHHHCCCHHHHHHHHHHHCCCCHHH
AALLNDTFATSKDNDLRLWINDFMNGIVQFNLRRLVKNNDNTGYELCISELKRYNLLPLP
HHHHHHHHCCCCCCCCEEEHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHCCCCCCC
MSFICRQIFLTKILNFSPILYKQVVKLLH
HHHHHHHHHHHHHHCCCHHHHHHHHHHHC
>Mature Secondary Structure
MNTELLTSIIIPCYNAEKYIHKCLESCLNQRLDYNTFEIIAIDDGSEDNTLNILHEFAHN
CCHHHHHHHHHCCCCHHHHHHHHHHHHHHCCCCCCCEEEEEECCCCCCCHHHHHHHHHCC
NPQLHMQILTQKNAGQSRARNHGLEYAHGKYILYLDSDDFFVDNTISEILYTAIDNQLDM
CCCEEEEEEECCCCCHHHHHHCCCCEECCEEEEEECCCCCEEHHHHHHHHHHHHCCCHHE
LWFDHQHVDENYNLLPLPQADCKKHVPTDIMSGIDFIKKAFNHSGMVWQFIFRKDFLIKN
EEECCHHCCCCCCEECCCHHHHHHCCCHHHHHHHHHHHHHHCCCCCEEHHHHHHCCEEEC
NILFFDGIIMQDIVYTLQCLYKCKRVQYYPICAYNYLIRSNSVTRDMLKKRKRSLDGMKV
CEEEEHHHHHHHHHHHHHHHHHHHHCEECEEHHHHHHHHCCCHHHHHHHHHHHCCCCHHH
AALLNDTFATSKDNDLRLWINDFMNGIVQFNLRRLVKNNDNTGYELCISELKRYNLLPLP
HHHHHHHHCCCCCCCCEEEHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHCCCCCCC
MSFICRQIFLTKILNFSPILYKQVVKLLH
HHHHHHHHHHHHHHCCCHHHHHHHHHHHC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 8041620; 9278503; 2647748 [H]