| Definition | Parabacteroides distasonis ATCC 8503 chromosome, complete genome. |
|---|---|
| Accession | NC_009615 |
| Length | 4,811,379 |
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The map label for this gene is 150008779
Identifier: 150008779
GI number: 150008779
Start: 2555962
End: 2556858
Strand: Direct
Name: 150008779
Synonym: BDI_2169
Alternate gene names: NA
Gene position: 2555962-2556858 (Clockwise)
Preceding gene: 150008778
Following gene: 150008781
Centisome position: 53.12
GC content: 41.92
Gene sequence:
>897_bases ATGAAAACATCCATCAATTACCTTCCCGAACAAAAACGGGATGACCTCAGAAGAATTGTAGAGTGCGTACTGGAAGTACT TCCCGATTGCGAGATGATCATTCTCTACGGAAGTTATGCCCGGAATACATACGTTGACTACGACCAACGCATCGAATACG GTATCCGCACCTGTTTTATGAGCGATTATGATATTTTGGTAGTTACCAATACCCGTTTCCAAAGATATATTATCAATCAC ATCTTGAGCAAGGCCACCGATAATTACTACAAAGGGAAGAACAGATACGCATCCACCACCGTACAATTTATAGACGAAAG CATCGACGACTTGAATAAAGCCATCGATAAAAACCGATATTTCTATACCGATATCAAGCGAGAAGGTATCATGCTTTACA ACAGCGGCCGTTATAAGTTGGCCCGCCGTCGTAAACTGAACTATCGGGAGATAAAAGAGTTGGCGGAGGAGTATTACAAC GACAGGTTTGAACGTGCGAATGATTTTTTACGAAATGCAATGTATGACAAAAACGACGAGAGATATAAAATATGTTCTTT TCATTTGCATCAAGCTTGTGAGAATTATTACAACAGCATAATCTTGACTTTTACATTGTATAGTCCCAAAGAGCATAGCC TAATAACGTTATCCGGCAGAGCCAAAACGCATTCCCTAGAGTCATCCGAAGCCTTTCCCCGGGATACGGAAGAAGAAAAA CGACTTTTCGATTTGCTGCAGGACGCATACGTTCAGGCTCGTTATAATTTACACTTCCGCGTCACTAAAGAAGATATCGA GGCGCTTATCCCCAAAGTAGAACTGCTCCGGGATATCACACGACAATGTTGCGAGGAGAGAATCAAAGTGTATGCGGCAA AACAAAGACAGGTTTGA
Upstream 100 bases:
>100_bases TCAGCGCACCGCTTTTAGCTATCGTAAAGGCTATCGGGACAGAACAATGTTCATTGAAAGTAAAAAGTGATTACAAACAA TTTGCATAGATAAACAAAGA
Downstream 100 bases:
>100_bases TGAGATTCCCCTCAATCGCCACCTTTATAACCCCATCCAACCTGTTTTCGAAGATACGGTAAGCCTCCTCAATCTCGTTC AATGGAAACTTATGGGTAAT
Product: hypothetical protein
Products: NA
Alternate protein names: DNA Polymerase Beta Domain Protein Region; Nucleotidyltransferase Protein; HEPN Domain-Containing Protein; Nucleotidyltransferase/HEPN Domain-Containing Protein; Hepn Domain Protein; Xin-Antitoxin System Toxin Component; HEPN Domain Protein; DNA Polymerase Beta Subunit; Nucleotidyltransferase Domain-Containing Protein
Number of amino acids: Translated: 298; Mature: 298
Protein sequence:
>298_residues MKTSINYLPEQKRDDLRRIVECVLEVLPDCEMIILYGSYARNTYVDYDQRIEYGIRTCFMSDYDILVVTNTRFQRYIINH ILSKATDNYYKGKNRYASTTVQFIDESIDDLNKAIDKNRYFYTDIKREGIMLYNSGRYKLARRRKLNYREIKELAEEYYN DRFERANDFLRNAMYDKNDERYKICSFHLHQACENYYNSIILTFTLYSPKEHSLITLSGRAKTHSLESSEAFPRDTEEEK RLFDLLQDAYVQARYNLHFRVTKEDIEALIPKVELLRDITRQCCEERIKVYAAKQRQV
Sequences:
>Translated_298_residues MKTSINYLPEQKRDDLRRIVECVLEVLPDCEMIILYGSYARNTYVDYDQRIEYGIRTCFMSDYDILVVTNTRFQRYIINH ILSKATDNYYKGKNRYASTTVQFIDESIDDLNKAIDKNRYFYTDIKREGIMLYNSGRYKLARRRKLNYREIKELAEEYYN DRFERANDFLRNAMYDKNDERYKICSFHLHQACENYYNSIILTFTLYSPKEHSLITLSGRAKTHSLESSEAFPRDTEEEK RLFDLLQDAYVQARYNLHFRVTKEDIEALIPKVELLRDITRQCCEERIKVYAAKQRQV >Mature_298_residues MKTSINYLPEQKRDDLRRIVECVLEVLPDCEMIILYGSYARNTYVDYDQRIEYGIRTCFMSDYDILVVTNTRFQRYIINH ILSKATDNYYKGKNRYASTTVQFIDESIDDLNKAIDKNRYFYTDIKREGIMLYNSGRYKLARRRKLNYREIKELAEEYYN DRFERANDFLRNAMYDKNDERYKICSFHLHQACENYYNSIILTFTLYSPKEHSLITLSGRAKTHSLESSEAFPRDTEEEK RLFDLLQDAYVQARYNLHFRVTKEDIEALIPKVELLRDITRQCCEERIKVYAAKQRQV
Specific function: Unknown
COG id: COG1708
COG function: function code R; Predicted nucleotidyltransferases
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 35891; Mature: 35891
Theoretical pI: Translated: 8.02; Mature: 8.02
Prosite motif: PS50910 HEPN
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.3 %Cys (Translated Protein) 1.7 %Met (Translated Protein) 4.0 %Cys+Met (Translated Protein) 2.3 %Cys (Mature Protein) 1.7 %Met (Mature Protein) 4.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKTSINYLPEQKRDDLRRIVECVLEVLPDCEMIILYGSYARNTYVDYDQRIEYGIRTCFM CCCCCCCCCCCHHHHHHHHHHHHHHHCCCCCEEEEECCCCCCCCCCHHHHHHHHHHHHEE SDYDILVVTNTRFQRYIINHILSKATDNYYKGKNRYASTTVQFIDESIDDLNKAIDKNRY CCCCEEEEECCHHHHHHHHHHHHHHCCCHHCCCCHHHHHHHHHHHHHHHHHHHHHHCCCE FYTDIKREGIMLYNSGRYKLARRRKLNYREIKELAEEYYNDRFERANDFLRNAMYDKNDE EEEEECCCCEEEEECCCHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCC RYKICSFHLHQACENYYNSIILTFTLYSPKEHSLITLSGRAKTHSLESSEAFPRDTEEEK CCHHHHHHHHHHHHHHHCCEEEEEEEECCCCCCEEEEECCCCCCCCCCCCCCCCCCHHHH RLFDLLQDAYVQARYNLHFRVTKEDIEALIPKVELLRDITRQCCEERIKVYAAKQRQV HHHHHHHHHHHHHHEEEEEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC >Mature Secondary Structure MKTSINYLPEQKRDDLRRIVECVLEVLPDCEMIILYGSYARNTYVDYDQRIEYGIRTCFM CCCCCCCCCCCHHHHHHHHHHHHHHHCCCCCEEEEECCCCCCCCCCHHHHHHHHHHHHEE SDYDILVVTNTRFQRYIINHILSKATDNYYKGKNRYASTTVQFIDESIDDLNKAIDKNRY CCCCEEEEECCHHHHHHHHHHHHHHCCCHHCCCCHHHHHHHHHHHHHHHHHHHHHHCCCE FYTDIKREGIMLYNSGRYKLARRRKLNYREIKELAEEYYNDRFERANDFLRNAMYDKNDE EEEEECCCCEEEEECCCHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCC RYKICSFHLHQACENYYNSIILTFTLYSPKEHSLITLSGRAKTHSLESSEAFPRDTEEEK CCHHHHHHHHHHHHHHHCCEEEEEEEECCCCCCEEEEECCCCCCCCCCCCCCCCCCHHHH RLFDLLQDAYVQARYNLHFRVTKEDIEALIPKVELLRDITRQCCEERIKVYAAKQRQV HHHHHHHHHHHHHHEEEEEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA