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The map label for this gene is ydeA [H]

Identifier: 150008775

GI number: 150008775

Start: 2551787

End: 2552395

Strand: Direct

Name: ydeA [H]

Synonym: BDI_2165

Alternate gene names: 150008775

Gene position: 2551787-2552395 (Clockwise)

Preceding gene: 150008768

Following gene: 150008778

Centisome position: 53.04

GC content: 45.81

Gene sequence:

>609_bases
ATGAAAAAAGAAATTCTATTCGTCTTGTTAAAAGACTTTGCCGACTGGGAAGGGGCTTATATCGCTCCAAACCTCAATGC
AGGTGTTGAACCCGGAAGTCAAAGCAAATATATAGTTAAAACCGTATCAGTCACAAAAGAGCCGGTTATATCGATCGGAG
GATTCAAGGTGCTCCCCGACTATGGGATCCATGACATTCCGGCCGATTATGCAGGGATCGTATTAATAGGTGGCATGAGC
TGGTTCACCCCGGAAGCCGAAGCCATTGTTCCTCTGGTAAAAGAGGCCATCGAGAAGAAGAGGCTGGTAGCCGGAATTTG
TAACGCCTCCGTCTTTCTTGGCAGGCACGGTTTCTTGAACCATGTAAATCATACCAGTAACGGATTGGATTACCTCAAAC
AATTCGCTGGGCCAAATTATACAGGTGAAAGTCTTTATATAAATGAACCGGCCGTCAGAGCCGGAAACATTATTACCGCC
AACGGATTTGCCACTCTGGAGTTCTGTCGTGAAATACTCTATGCGCTGGAGGCAGACTCTTCCCCAAAGATAGAGAGAAG
CTATCGAATGAACAAAACAGGTGTTTGGGAAGATCCAGAAGTGGGATAA

Upstream 100 bases:

>100_bases
TAAACTTCTGCCCAGGTTGGAAAGGATATTTCAAATCTCTTTCGCCTGACGAGCAAAACGAGATTAGAAAGAAGTATAAC
TTCGATAAATACAATAAATA

Downstream 100 bases:

>100_bases
ATCACTTATCTAATGGTGGTAGATAATAAAAACATCTACCACCAACAACTTACATCTACCATCATTTACTACTTTTCGAC
CACTAAATACAACCGTCCCC

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 202; Mature: 202

Protein sequence:

>202_residues
MKKEILFVLLKDFADWEGAYIAPNLNAGVEPGSQSKYIVKTVSVTKEPVISIGGFKVLPDYGIHDIPADYAGIVLIGGMS
WFTPEAEAIVPLVKEAIEKKRLVAGICNASVFLGRHGFLNHVNHTSNGLDYLKQFAGPNYTGESLYINEPAVRAGNIITA
NGFATLEFCREILYALEADSSPKIERSYRMNKTGVWEDPEVG

Sequences:

>Translated_202_residues
MKKEILFVLLKDFADWEGAYIAPNLNAGVEPGSQSKYIVKTVSVTKEPVISIGGFKVLPDYGIHDIPADYAGIVLIGGMS
WFTPEAEAIVPLVKEAIEKKRLVAGICNASVFLGRHGFLNHVNHTSNGLDYLKQFAGPNYTGESLYINEPAVRAGNIITA
NGFATLEFCREILYALEADSSPKIERSYRMNKTGVWEDPEVG
>Mature_202_residues
MKKEILFVLLKDFADWEGAYIAPNLNAGVEPGSQSKYIVKTVSVTKEPVISIGGFKVLPDYGIHDIPADYAGIVLIGGMS
WFTPEAEAIVPLVKEAIEKKRLVAGICNASVFLGRHGFLNHVNHTSNGLDYLKQFAGPNYTGESLYINEPAVRAGNIITA
NGFATLEFCREILYALEADSSPKIERSYRMNKTGVWEDPEVG

Specific function: Unknown

COG id: COG0693

COG function: function code R; Putative intracellular protease/amidase

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Contains 1 PfpI endopeptidase domain [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR002818 [H]

Pfam domain/function: PF01965 DJ-1_PfpI [H]

EC number: NA

Molecular weight: Translated: 22139; Mature: 22139

Theoretical pI: Translated: 5.31; Mature: 5.31

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.0 %Cys     (Translated Protein)
1.5 %Met     (Translated Protein)
2.5 %Cys+Met (Translated Protein)
1.0 %Cys     (Mature Protein)
1.5 %Met     (Mature Protein)
2.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKKEILFVLLKDFADWEGAYIAPNLNAGVEPGSQSKYIVKTVSVTKEPVISIGGFKVLPD
CCCHHHHHHHHHHCCCCCCEECCCCCCCCCCCCCCCEEEEEEECCCCCEEEECCEEECCC
YGIHDIPADYAGIVLIGGMSWFTPEAEAIVPLVKEAIEKKRLVAGICNASVFLGRHGFLN
CCCCCCCCCCCCEEEECCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCHHHHHCCCCHHH
HVNHTSNGLDYLKQFAGPNYTGESLYINEPAVRAGNIITANGFATLEFCREILYALEADS
CCCCCCHHHHHHHHHCCCCCCCCEEEECCCCCCCCCEEEECCCHHHHHHHHHHHHHCCCC
SPKIERSYRMNKTGVWEDPEVG
CCCCHHHHCCCCCCCCCCCCCC
>Mature Secondary Structure
MKKEILFVLLKDFADWEGAYIAPNLNAGVEPGSQSKYIVKTVSVTKEPVISIGGFKVLPD
CCCHHHHHHHHHHCCCCCCEECCCCCCCCCCCCCCCEEEEEEECCCCCEEEECCEEECCC
YGIHDIPADYAGIVLIGGMSWFTPEAEAIVPLVKEAIEKKRLVAGICNASVFLGRHGFLN
CCCCCCCCCCCCEEEECCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCHHHHHCCCCHHH
HVNHTSNGLDYLKQFAGPNYTGESLYINEPAVRAGNIITANGFATLEFCREILYALEADS
CCCCCCHHHHHHHHHCCCCCCCCEEEECCCCCCCCCEEEECCCHHHHHHHHHHHHHCCCC
SPKIERSYRMNKTGVWEDPEVG
CCCCHHHHCCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9384377 [H]