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The map label for this gene is xerC [C]

Identifier: 150008748

GI number: 150008748

Start: 2522014

End: 2523234

Strand: Direct

Name: xerC [C]

Synonym: BDI_2138

Alternate gene names: 150008748

Gene position: 2522014-2523234 (Clockwise)

Preceding gene: 150008747

Following gene: 150008749

Centisome position: 52.42

GC content: 49.14

Gene sequence:

>1221_bases
ATGGCAAGAAGTACATTCAAAGTGCTGTTCTACGTGAACGGCAGCAAGGAGAAAGACGGTATTGTCCCCATCATGGGACG
AGTGACAATCAACGGTACTGTGGCGCAGTTCAGTTGCAAGCAGACCATCCCGAAAACCCTTTGGGATGCGAAAGGCAACC
GAGCCAAAGGCAAGAGTGCCGAAGCACGGAACATCAATCTGGCATTGGACAACATCAAGGCGCAAATCATCAAGCACTAT
CAGCGCATATCCGACCGAGAGGCATACGTAACGGCTGAAATGGTGCGCAATGCCTACCAAGGGGTAGGAAGCGAGTATGA
GACACTGATAAAGGCTTTTGACAAGGATTGCGCCAACTTCCTGAAACGTGTCGGCAAAGACCGCAGCATCGGCACATACA
AGGTAATGGTAAGGGCAAGGAACTATGTCGCAGCCTTTATCAAGTCATTCTACAGACGGACGGACATGTCCATGCTGGAA
CTTACGCCCGACTTCATCAAGGAGTTTGCGGCTTATCTTACGGCTGAACGGGGACTGAAAAACGCCACCATCTGGCTGAA
CTGCATGTGGCTGAAAGGCGTGGTCATGCGTGCGCACTATAACGGACTGATACCGAGAAATCCGTTTGCGCAGTTCCATA
TCAGCCCGAATGTTAAGGAACGGGAATATCTGACAGAGGACGAAATCAAAAGAATCATGGCGCACGAGTTTGACAACCCC
ACCCTCGCATTGGTGCGAGACCTGTTCATTTTCGCCTGCTTCACCGCCTTGTCTTTCGTGGATATGAAAGAACTCACAAC
GGACGAAATAGTGGAGGTGAACGGCGAGAAATGGATATTGTCGAAACGGCACAAGACAAATGTCCCGTTCCAAGTGAAGC
TGCTTGATATTCCCTTGCAGATAATCGAACGGTACAAGTATCTGTCGGAAGACAAGCTGGTTTTCGGGAAAATCAACTAT
TGGACGATGTGCAAACAACTGAAAAAGGTAATGGCGGAATGCGGAATAGAGAAGCAAATCTCCTACCATTGCGCACGTCA
TACGTTTGGAACACTGGCTCTTAGCAAGGGGATGCCCATTGAAAGCGTGAGCCGTGTTCTGGGACACACGAACATTGTCA
CGACTCAAATCTATGCGAAGATAACCACACAGAAACTTGACAATGACCTGACGATGTTCGGCAACAAGCTGAACGCATCG
TTCGGAAGTGTAACCCCATAA

Upstream 100 bases:

>100_bases
AAGATTTAACATATGAGAGATGCTATTGCACCGTTTGTCACCGATTTGCGTATCAAGGTCTAACTCGTTGATATTTAACT
TTGCAAACAAAAAAACGAGT

Downstream 100 bases:

>100_bases
CCAAGCATAGCCATGAAACGAAGCATCATCACAACGGACGGCAACGGCAACATCACCTTGCCGACCGACATTAGCGCAAC
CGCCATGAGCGAATGGGAAC

Product: integrase

Products: NA

Alternate protein names: Tyrosine Type Site-Specific Recombinase; Transposase; Integrase Family Protein; Site-Specific Recombinase; Phage Integrase Family Protein; Site-Specific Recombinase Phage Integrase Family; Bacteriophage Integrase; Phage Integrase; Integrase/Transposase; Integrase Protein; Mobilizable Transposon Protein Int Protein; Prophage

Number of amino acids: Translated: 406; Mature: 405

Protein sequence:

>406_residues
MARSTFKVLFYVNGSKEKDGIVPIMGRVTINGTVAQFSCKQTIPKTLWDAKGNRAKGKSAEARNINLALDNIKAQIIKHY
QRISDREAYVTAEMVRNAYQGVGSEYETLIKAFDKDCANFLKRVGKDRSIGTYKVMVRARNYVAAFIKSFYRRTDMSMLE
LTPDFIKEFAAYLTAERGLKNATIWLNCMWLKGVVMRAHYNGLIPRNPFAQFHISPNVKEREYLTEDEIKRIMAHEFDNP
TLALVRDLFIFACFTALSFVDMKELTTDEIVEVNGEKWILSKRHKTNVPFQVKLLDIPLQIIERYKYLSEDKLVFGKINY
WTMCKQLKKVMAECGIEKQISYHCARHTFGTLALSKGMPIESVSRVLGHTNIVTTQIYAKITTQKLDNDLTMFGNKLNAS
FGSVTP

Sequences:

>Translated_406_residues
MARSTFKVLFYVNGSKEKDGIVPIMGRVTINGTVAQFSCKQTIPKTLWDAKGNRAKGKSAEARNINLALDNIKAQIIKHY
QRISDREAYVTAEMVRNAYQGVGSEYETLIKAFDKDCANFLKRVGKDRSIGTYKVMVRARNYVAAFIKSFYRRTDMSMLE
LTPDFIKEFAAYLTAERGLKNATIWLNCMWLKGVVMRAHYNGLIPRNPFAQFHISPNVKEREYLTEDEIKRIMAHEFDNP
TLALVRDLFIFACFTALSFVDMKELTTDEIVEVNGEKWILSKRHKTNVPFQVKLLDIPLQIIERYKYLSEDKLVFGKINY
WTMCKQLKKVMAECGIEKQISYHCARHTFGTLALSKGMPIESVSRVLGHTNIVTTQIYAKITTQKLDNDLTMFGNKLNAS
FGSVTP
>Mature_405_residues
ARSTFKVLFYVNGSKEKDGIVPIMGRVTINGTVAQFSCKQTIPKTLWDAKGNRAKGKSAEARNINLALDNIKAQIIKHYQ
RISDREAYVTAEMVRNAYQGVGSEYETLIKAFDKDCANFLKRVGKDRSIGTYKVMVRARNYVAAFIKSFYRRTDMSMLEL
TPDFIKEFAAYLTAERGLKNATIWLNCMWLKGVVMRAHYNGLIPRNPFAQFHISPNVKEREYLTEDEIKRIMAHEFDNPT
LALVRDLFIFACFTALSFVDMKELTTDEIVEVNGEKWILSKRHKTNVPFQVKLLDIPLQIIERYKYLSEDKLVFGKINYW
TMCKQLKKVMAECGIEKQISYHCARHTFGTLALSKGMPIESVSRVLGHTNIVTTQIYAKITTQKLDNDLTMFGNKLNASF
GSVTP

Specific function: Site-Specific Tyrosine Recombinase, Which Acts By Catalyzing The Cutting And Rejoining Of The Recombining DNA Molecules. Binds Cooperatively To Specific DNA Consensus Sequences That Are Separated From Xerd Binding Sites By A Short Central Region, Forming

COG id: COG0582

COG function: function code L; Integrase

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 46492; Mature: 46361

Theoretical pI: Translated: 9.95; Mature: 9.95

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.7 %Cys     (Translated Protein)
3.4 %Met     (Translated Protein)
5.2 %Cys+Met (Translated Protein)
1.7 %Cys     (Mature Protein)
3.2 %Met     (Mature Protein)
4.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MARSTFKVLFYVNGSKEKDGIVPIMGRVTINGTVAQFSCKQTIPKTLWDAKGNRAKGKSA
CCCCEEEEEEEEECCCCCCCCEEEEEEEEECCEEEEEEHHHHHHHHHHCCCCCCCCCCCC
EARNINLALDNIKAQIIKHYQRISDREAYVTAEMVRNAYQGVGSEYETLIKAFDKDCANF
CCCEEEEEHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHH
LKRVGKDRSIGTYKVMVRARNYVAAFIKSFYRRTDMSMLELTPDFIKEFAAYLTAERGLK
HHHHCCCCCCCCEEEEHHHHHHHHHHHHHHHHHCCCHHHHCCHHHHHHHHHHHHHHCCCC
NATIWLNCMWLKGVVMRAHYNGLIPRNPFAQFHISPNVKEREYLTEDEIKRIMAHEFDNP
CCEEEEEEHHHHHHHHHHHCCCCCCCCCCEEEEECCCCCHHHCCCHHHHHHHHHHCCCCC
TLALVRDLFIFACFTALSFVDMKELTTDEIVEVNGEKWILSKRHKTNVPFQVKLLDIPLQ
HHHHHHHHHHHHHHHHHHHHHHHHCCHHHHEEECCCEEEEECCCCCCCCEEEEEECCCHH
IIERYKYLSEDKLVFGKINYWTMCKQLKKVMAECGIEKQISYHCARHTFGTLALSKGMPI
HHHHHHHCCCCCEEEEECHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHCCCCCCH
ESVSRVLGHTNIVTTQIYAKITTQKLDNDLTMFGNKLNASFGSVTP
HHHHHHHCCCCEEEHHHHHHHHHHHHCCCHHHHCCHHCCCCCCCCC
>Mature Secondary Structure 
ARSTFKVLFYVNGSKEKDGIVPIMGRVTINGTVAQFSCKQTIPKTLWDAKGNRAKGKSA
CCCEEEEEEEEECCCCCCCCEEEEEEEEECCEEEEEEHHHHHHHHHHCCCCCCCCCCCC
EARNINLALDNIKAQIIKHYQRISDREAYVTAEMVRNAYQGVGSEYETLIKAFDKDCANF
CCCEEEEEHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHH
LKRVGKDRSIGTYKVMVRARNYVAAFIKSFYRRTDMSMLELTPDFIKEFAAYLTAERGLK
HHHHCCCCCCCCEEEEHHHHHHHHHHHHHHHHHCCCHHHHCCHHHHHHHHHHHHHHCCCC
NATIWLNCMWLKGVVMRAHYNGLIPRNPFAQFHISPNVKEREYLTEDEIKRIMAHEFDNP
CCEEEEEEHHHHHHHHHHHCCCCCCCCCCEEEEECCCCCHHHCCCHHHHHHHHHHCCCCC
TLALVRDLFIFACFTALSFVDMKELTTDEIVEVNGEKWILSKRHKTNVPFQVKLLDIPLQ
HHHHHHHHHHHHHHHHHHHHHHHHCCHHHHEEECCCEEEEECCCCCCCCEEEEEECCCHH
IIERYKYLSEDKLVFGKINYWTMCKQLKKVMAECGIEKQISYHCARHTFGTLALSKGMPI
HHHHHHHCCCCCEEEEECHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHCCCCCCH
ESVSRVLGHTNIVTTQIYAKITTQKLDNDLTMFGNKLNASFGSVTP
HHHHHHHCCCCEEEHHHHHHHHHHHHCCCHHHHCCHHCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: DNA [C]

Specific reaction: Protein + DNA = Protein-DNA [C]

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA