Definition Parabacteroides distasonis ATCC 8503 chromosome, complete genome.
Accession NC_009615
Length 4,811,379

Click here to switch to the map view.

The map label for this gene is 150008620

Identifier: 150008620

GI number: 150008620

Start: 2374664

End: 2376046

Strand: Reverse

Name: 150008620

Synonym: BDI_2006

Alternate gene names: NA

Gene position: 2376046-2374664 (Counterclockwise)

Preceding gene: 150008627

Following gene: 150008617

Centisome position: 49.38

GC content: 45.12

Gene sequence:

>1383_bases
ATGAAGAAAAAAGTAGTATTAGGTGCGGCATTGATGATGATGCCTTTGGTTTCTTTCGCTGGAGGATATTTGACGAATAC
GAATCAGCATGCAGCCTTTTTAAGGTCACTTTCGCGAGGTGCTGCAATTGATATAGACGGCGCTTTGTCAAACCCGGCGG
GTCTTTCTTTTTTGCCGACAGACGGTTTCCGCGTTGGTGTGAGTATCCAAAGTGCTTTCCAGACCCGGGATATCGATGCC
TCTTTCAGTACATACAATGGTTTCGACCCAGTGAATAAGGTGCCGACAGTGAGCGACGTTCCCTATAAAAAGTATTACAA
AGGAAAGGCAGCCGCTCCCGTGATTCCGAGTGTTTTTGCGGCTTACAAAAAAGGTGATTGGACGATCTCCGGTTTCTTTG
CCATTACGGGTGGAGGTGGTAAGGCTTCGTTTGACGATGGTCTGCCAATGTTCGAATCGGCTGCTATGGCCGGTATCTTC
AAGGAAAGTGTAGCGAAATATATAAAGACTGGCGGTCAAAGTCCCATCGTCACGCCGGATATGTATACTATTAACAGTGC
GATGGACGGAAAACAGTATATTTATTCCCTACAACTTGGCCTATCATACAAGATCACGGATTGGCTTTCTGCCTTTGCCG
GTGGCCGGATGAACTATTTCTCAGGAAACTATGACGGGTATCTGGATGCAAAATTAAAACAGAATTTTGGTGGAGCGGAT
TTAATGAACCTGGCTTTGGATTGCGACCAGACAGGTTGGGGGTTGACACCGGTTTTGGGTGTCGATGTCAAATATGGTAA
ATTCAATTTCGGAGCTAAATATGAGTTTAAGACGAACTTGAACATCGAAAACAATACCAAGAAGTTGGATTATCCCGACA
GTGCGGAAGGTTTGGTTGGCCCTTATAAGCATGGTGTAAATACGCCGAACGATATTCCTTCCATGCTTTCGGTGGCAGCT
TCTTATCGGTTTTTGCCCATGTTGAAGGCTTCTGTTGAGTATCACTTCTTCGATGATAAGAAGGCGGGAATGGCCGGTGG
AAAGCAGAAGGAACTGGAAAGAGGTACGAATGAGTATCTGTTTGGTATAGAGTGGGATGTTGTCAAGAGATTGACCATTA
GCGGTGGCGCTCAAATTACAGATTATGGTTTGTCTGATAATTTCCAAAGTGATGTTAGTTTCTCCTGCGATTCTTATTCG
CTGGGCTTTGGTGCTAAAGTGATGTTGAGCGAAAAAATGGCTTTGAACGTGGGATATATGTGGACAACTTACCACGATTA
TACCAAGAAGATGGACAACTACTGCGGCACGGGACTTCCTGGGCAGAATGTGTATAGCCGCACCAACAAGGTGTTCGGAT
TAAGTTTGGACTACGCTTTCTAA

Upstream 100 bases:

>100_bases
AGTATTTGCTGTTTTGTGCGGCACATTTTTATTAAAAGTGTGCAGTGTTTGAAAAAAGTATTTATCTTTGCGACCGTTTT
GTAATCAAGAAAAGTAAAAC

Downstream 100 bases:

>100_bases
GCTTGAAAATATTCGTATCCTATTGAAAAAGGAAGCTGCCTGTCGTGTGGCTTCCTTTTTTTAATTCATGGGTATTCAAC
GGACTATATGAAACCCTATG

Product: putative outer membrane protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 460; Mature: 460

Protein sequence:

>460_residues
MKKKVVLGAALMMMPLVSFAGGYLTNTNQHAAFLRSLSRGAAIDIDGALSNPAGLSFLPTDGFRVGVSIQSAFQTRDIDA
SFSTYNGFDPVNKVPTVSDVPYKKYYKGKAAAPVIPSVFAAYKKGDWTISGFFAITGGGGKASFDDGLPMFESAAMAGIF
KESVAKYIKTGGQSPIVTPDMYTINSAMDGKQYIYSLQLGLSYKITDWLSAFAGGRMNYFSGNYDGYLDAKLKQNFGGAD
LMNLALDCDQTGWGLTPVLGVDVKYGKFNFGAKYEFKTNLNIENNTKKLDYPDSAEGLVGPYKHGVNTPNDIPSMLSVAA
SYRFLPMLKASVEYHFFDDKKAGMAGGKQKELERGTNEYLFGIEWDVVKRLTISGGAQITDYGLSDNFQSDVSFSCDSYS
LGFGAKVMLSEKMALNVGYMWTTYHDYTKKMDNYCGTGLPGQNVYSRTNKVFGLSLDYAF

Sequences:

>Translated_460_residues
MKKKVVLGAALMMMPLVSFAGGYLTNTNQHAAFLRSLSRGAAIDIDGALSNPAGLSFLPTDGFRVGVSIQSAFQTRDIDA
SFSTYNGFDPVNKVPTVSDVPYKKYYKGKAAAPVIPSVFAAYKKGDWTISGFFAITGGGGKASFDDGLPMFESAAMAGIF
KESVAKYIKTGGQSPIVTPDMYTINSAMDGKQYIYSLQLGLSYKITDWLSAFAGGRMNYFSGNYDGYLDAKLKQNFGGAD
LMNLALDCDQTGWGLTPVLGVDVKYGKFNFGAKYEFKTNLNIENNTKKLDYPDSAEGLVGPYKHGVNTPNDIPSMLSVAA
SYRFLPMLKASVEYHFFDDKKAGMAGGKQKELERGTNEYLFGIEWDVVKRLTISGGAQITDYGLSDNFQSDVSFSCDSYS
LGFGAKVMLSEKMALNVGYMWTTYHDYTKKMDNYCGTGLPGQNVYSRTNKVFGLSLDYAF
>Mature_460_residues
MKKKVVLGAALMMMPLVSFAGGYLTNTNQHAAFLRSLSRGAAIDIDGALSNPAGLSFLPTDGFRVGVSIQSAFQTRDIDA
SFSTYNGFDPVNKVPTVSDVPYKKYYKGKAAAPVIPSVFAAYKKGDWTISGFFAITGGGGKASFDDGLPMFESAAMAGIF
KESVAKYIKTGGQSPIVTPDMYTINSAMDGKQYIYSLQLGLSYKITDWLSAFAGGRMNYFSGNYDGYLDAKLKQNFGGAD
LMNLALDCDQTGWGLTPVLGVDVKYGKFNFGAKYEFKTNLNIENNTKKLDYPDSAEGLVGPYKHGVNTPNDIPSMLSVAA
SYRFLPMLKASVEYHFFDDKKAGMAGGKQKELERGTNEYLFGIEWDVVKRLTISGGAQITDYGLSDNFQSDVSFSCDSYS
LGFGAKVMLSEKMALNVGYMWTTYHDYTKKMDNYCGTGLPGQNVYSRTNKVFGLSLDYAF

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 50168; Mature: 50168

Theoretical pI: Translated: 8.30; Mature: 8.30

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.7 %Cys     (Translated Protein)
3.7 %Met     (Translated Protein)
4.3 %Cys+Met (Translated Protein)
0.7 %Cys     (Mature Protein)
3.7 %Met     (Mature Protein)
4.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKKKVVLGAALMMMPLVSFAGGYLTNTNQHAAFLRSLSRGAAIDIDGALSNPAGLSFLPT
CCCEEEHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHCCCCEEEECCCCCCCCCCEEECC
DGFRVGVSIQSAFQTRDIDASFSTYNGFDPVNKVPTVSDVPYKKYYKGKAAAPVIPSVFA
CCEEEEEEHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHCCCCCCCHHHHHHH
AYKKGDWTISGFFAITGGGGKASFDDGLPMFESAAMAGIFKESVAKYIKTGGQSPIVTPD
HHCCCCEEEEEEEEEECCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCC
MYTINSAMDGKQYIYSLQLGLSYKITDWLSAFAGGRMNYFSGNYDGYLDAKLKQNFGGAD
CEEECCCCCCCEEEEEEEECCEEEHHHHHHHHHCCCEEECCCCCCCEEEHHHHCCCCCCH
LMNLALDCDQTGWGLTPVLGVDVKYGKFNFGAKYEFKTNLNIENNTKKLDYPDSAEGLVG
HHHEEEECCCCCCCCCCEEEEEEEECCCCCCEEEEEEEECCCCCCCCCCCCCCCCCCCCC
PYKHGVNTPNDIPSMLSVAASYRFLPMLKASVEYHFFDDKKAGMAGGKQKELERGTNEYL
CHHCCCCCCCHHHHHHHHHHHHHHHHHHHHCEEEEEECCCCCCCCCCCHHHHHCCCCCEE
FGIEWDVVKRLTISGGAQITDYGLSDNFQSDVSFSCDSYSLGFGAKVMLSEKMALNVGYM
EEEEHHHHHEEEECCCCEEEECCCCCCCCCCCCCCCCCEECCCCEEEEEECCEEEEECEE
WTTYHDYTKKMDNYCGTGLPGQNVYSRTNKVFGLSLDYAF
EEEHHHHHHHHHHHCCCCCCCCHHHHHCCEEEEEEECCCC
>Mature Secondary Structure
MKKKVVLGAALMMMPLVSFAGGYLTNTNQHAAFLRSLSRGAAIDIDGALSNPAGLSFLPT
CCCEEEHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHCCCCEEEECCCCCCCCCCEEECC
DGFRVGVSIQSAFQTRDIDASFSTYNGFDPVNKVPTVSDVPYKKYYKGKAAAPVIPSVFA
CCEEEEEEHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHCCCCCCCHHHHHHH
AYKKGDWTISGFFAITGGGGKASFDDGLPMFESAAMAGIFKESVAKYIKTGGQSPIVTPD
HHCCCCEEEEEEEEEECCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCC
MYTINSAMDGKQYIYSLQLGLSYKITDWLSAFAGGRMNYFSGNYDGYLDAKLKQNFGGAD
CEEECCCCCCCEEEEEEEECCEEEHHHHHHHHHCCCEEECCCCCCCEEEHHHHCCCCCCH
LMNLALDCDQTGWGLTPVLGVDVKYGKFNFGAKYEFKTNLNIENNTKKLDYPDSAEGLVG
HHHEEEECCCCCCCCCCEEEEEEEECCCCCCEEEEEEEECCCCCCCCCCCCCCCCCCCCC
PYKHGVNTPNDIPSMLSVAASYRFLPMLKASVEYHFFDDKKAGMAGGKQKELERGTNEYL
CHHCCCCCCCHHHHHHHHHHHHHHHHHHHHCEEEEEECCCCCCCCCCCHHHHHCCCCCEE
FGIEWDVVKRLTISGGAQITDYGLSDNFQSDVSFSCDSYSLGFGAKVMLSEKMALNVGYM
EEEEHHHHHEEEECCCCEEEECCCCCCCCCCCCCCCCCEECCCCEEEEEECCEEEEECEE
WTTYHDYTKKMDNYCGTGLPGQNVYSRTNKVFGLSLDYAF
EEEHHHHHHHHHHHCCCCCCCCHHHHHCCEEEEEEECCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA