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The map label for this gene is yafV [H]

Identifier: 150008615

GI number: 150008615

Start: 2368232

End: 2369017

Strand: Reverse

Name: yafV [H]

Synonym: BDI_2001

Alternate gene names: 150008615

Gene position: 2369017-2368232 (Counterclockwise)

Preceding gene: 150008616

Following gene: 150008614

Centisome position: 49.24

GC content: 48.47

Gene sequence:

>786_bases
ATGACTGAAGACTTACGTATCAGCATGATACAATCCCATATCATTTGGGAAGACCGTGAAGAGAACTTGGGTTATTACGG
CGAACTGTTGCGCCGTGTTAGTGGAAGAACCGATTTAGCCGTATTGCCGGAGACGTTTACCACGGGATTTTCCATGGACG
TGGAGAAACAAGCCGATACGATGGAGGGCCAGACCGTACCGACTATAAAGGAATGGGCTAAGAAATATAAACTGGCCGTG
GCCGGGAGTTTTATCGCGAAAGATAACGGAAAGTTCTACAACCGGGCTTTTTTCATCACTCCGGAAGGAGAGGAGTATTA
TTACGATAAGCGTCATTTGTTCCGTATGGCGGAAGAGGACAAGCATTTCTCGGCGGGCGACAAACGGCTGATCGTGCCCT
ATAAAGGCTGGAATATCTGTTTGCAGGTTTGTTATGACCTGCGTTTCCCGGTTTGGAGCCGCAACGTAAATAACGAATAT
GATCTTTTGATTTATGTGGCCAATTGGCCCGAGGCCCGGAAGAAGGCGTGGAAGGCATTGCTGCATGCCCGTGCCATTGA
GAACATGGCTTATGTCTGTGGCGTGAACCGTGTGGGGGTAGATGGGAAAGGTTTTCTTTTCAGAGGGGATTCCATGATTT
ATAACGCAAAAGGAAAGAAATTGGCTGATGCCGGAAAACGGGAGGAAATCACCCGGACATGTACCTTGAAGAAGAGCGAG
CTGGATGAGTTCCGGGCTAAGTTCCCGGCGTGGAAGGATGCGGATGGATTTAGTATTGACTTCTAA

Upstream 100 bases:

>100_bases
GAGAAACAAAAGTTTTGCTATGAAGAAACTACTGTTTCTTCACCATGAAACTGTTTCCTTGTCACAATATGTCTTTTTAT
TACCTTAATATCTTTATTCT

Downstream 100 bases:

>100_bases
TCATCTGATTCCTGCTGATTATGGAAAAACGTAGTCCTTGGGCTTGGATCCCGTCTCTTTATTTCGCCGAAGGCTTGCCC
TACGTGGTAGTCATGACGCT

Product: putative amidohydrolase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 261; Mature: 260

Protein sequence:

>261_residues
MTEDLRISMIQSHIIWEDREENLGYYGELLRRVSGRTDLAVLPETFTTGFSMDVEKQADTMEGQTVPTIKEWAKKYKLAV
AGSFIAKDNGKFYNRAFFITPEGEEYYYDKRHLFRMAEEDKHFSAGDKRLIVPYKGWNICLQVCYDLRFPVWSRNVNNEY
DLLIYVANWPEARKKAWKALLHARAIENMAYVCGVNRVGVDGKGFLFRGDSMIYNAKGKKLADAGKREEITRTCTLKKSE
LDEFRAKFPAWKDADGFSIDF

Sequences:

>Translated_261_residues
MTEDLRISMIQSHIIWEDREENLGYYGELLRRVSGRTDLAVLPETFTTGFSMDVEKQADTMEGQTVPTIKEWAKKYKLAV
AGSFIAKDNGKFYNRAFFITPEGEEYYYDKRHLFRMAEEDKHFSAGDKRLIVPYKGWNICLQVCYDLRFPVWSRNVNNEY
DLLIYVANWPEARKKAWKALLHARAIENMAYVCGVNRVGVDGKGFLFRGDSMIYNAKGKKLADAGKREEITRTCTLKKSE
LDEFRAKFPAWKDADGFSIDF
>Mature_260_residues
TEDLRISMIQSHIIWEDREENLGYYGELLRRVSGRTDLAVLPETFTTGFSMDVEKQADTMEGQTVPTIKEWAKKYKLAVA
GSFIAKDNGKFYNRAFFITPEGEEYYYDKRHLFRMAEEDKHFSAGDKRLIVPYKGWNICLQVCYDLRFPVWSRNVNNEYD
LLIYVANWPEARKKAWKALLHARAIENMAYVCGVNRVGVDGKGFLFRGDSMIYNAKGKKLADAGKREEITRTCTLKKSEL
DEFRAKFPAWKDADGFSIDF

Specific function: Unknown

COG id: COG0388

COG function: function code R; Predicted amidohydrolase

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 CN hydrolase domain [H]

Homologues:

Organism=Homo sapiens, GI9910460, Length=263, Percent_Identity=26.2357414448669, Blast_Score=74, Evalue=1e-13,
Organism=Escherichia coli, GI1786412, Length=255, Percent_Identity=45.0980392156863, Blast_Score=231, Evalue=3e-62,
Organism=Saccharomyces cerevisiae, GI6323383, Length=273, Percent_Identity=23.0769230769231, Blast_Score=68, Evalue=1e-12,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003010
- InterPro:   IPR001110 [H]

Pfam domain/function: PF00795 CN_hydrolase [H]

EC number: 3.5.-.- [C]

Molecular weight: Translated: 30317; Mature: 30186

Theoretical pI: Translated: 8.27; Mature: 8.27

Prosite motif: PS50263 CN_HYDROLASE

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.5 %Cys     (Translated Protein)
2.7 %Met     (Translated Protein)
4.2 %Cys+Met (Translated Protein)
1.5 %Cys     (Mature Protein)
2.3 %Met     (Mature Protein)
3.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTEDLRISMIQSHIIWEDREENLGYYGELLRRVSGRTDLAVLPETFTTGFSMDVEKQADT
CCCCHHHHHHHHHHCCCCCCCCCCHHHHHHHHHCCCCCEEECCCHHCCCCCCCHHHHHHH
MEGQTVPTIKEWAKKYKLAVAGSFIAKDNGKFYNRAFFITPEGEEYYYDKRHLFRMAEED
CCCCCCCHHHHHHHHHHHHEEEEEEECCCCCEEEEEEEEECCCCCEEHHHHHHHHHHHCC
KHFSAGDKRLIVPYKGWNICLQVCYDLRFPVWSRNVNNEYDLLIYVANWPEARKKAWKAL
CCCCCCCCEEEEEECCHHHHHHHHHHCCCCCCCCCCCCCEEEEEEEECCCHHHHHHHHHH
LHARAIENMAYVCGVNRVGVDGKGFLFRGDSMIYNAKGKKLADAGKREEITRTCTLKKSE
HHHHHHHHHHHHHCCCEECCCCCEEEEECCCEEEECCCCCHHCCCCHHHHHHHHCCCHHH
LDEFRAKFPAWKDADGFSIDF
HHHHHHHCCCCCCCCCCEECC
>Mature Secondary Structure 
TEDLRISMIQSHIIWEDREENLGYYGELLRRVSGRTDLAVLPETFTTGFSMDVEKQADT
CCCHHHHHHHHHHCCCCCCCCCCHHHHHHHHHCCCCCEEECCCHHCCCCCCCHHHHHHH
MEGQTVPTIKEWAKKYKLAVAGSFIAKDNGKFYNRAFFITPEGEEYYYDKRHLFRMAEED
CCCCCCCHHHHHHHHHHHHEEEEEEECCCCCEEEEEEEEECCCCCEEHHHHHHHHHHHCC
KHFSAGDKRLIVPYKGWNICLQVCYDLRFPVWSRNVNNEYDLLIYVANWPEARKKAWKAL
CCCCCCCCEEEEEECCHHHHHHHHHHCCCCCCCCCCCCCEEEEEEEECCCHHHHHHHHHH
LHARAIENMAYVCGVNRVGVDGKGFLFRGDSMIYNAKGKKLADAGKREEITRTCTLKKSE
HHHHHHHHHHHHHCCCEECCCCCEEEEECCCEEEECCCCCHHCCCCHHHHHHHHCCCHHH
LDEFRAKFPAWKDADGFSIDF
HHHHHHHCCCCCCCCCCEECC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9278503 [H]