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The map label for this gene is ihfB [C]

Identifier: 150008609

GI number: 150008609

Start: 2358227

End: 2358499

Strand: Direct

Name: ihfB [C]

Synonym: BDI_1995

Alternate gene names: 150008609

Gene position: 2358227-2358499 (Clockwise)

Preceding gene: 150008603

Following gene: 150008610

Centisome position: 49.01

GC content: 38.83

Gene sequence:

>273_bases
ATGACTAAAGCAGATATTGTTAGCGAGATTTCAAAAAGCACTGGTATCGACAAACAGACAGTGCTAGCAAGCGTTGAGTC
CTTCATGGATATCGTAAAAAGTTCTTTAGCCCAAGGCGAAAACGTTTACTTGAGAGGTTTCGGAAGTTTCGTTATTAAGA
AGAGAGCTCAAAAGACAGCTCGTAATATTTCAAAAAATACTACGATCATCATCCCGGAACACAACATTCCGTCATTCAAG
CCGGCTAAGACTTTTATTGGTGAAGTTAAGTAA

Upstream 100 bases:

>100_bases
TTAAAAATTGAAGCTCAATTCTTTTTCCACTTAAATAAAAAGCTATATATTTGCATTCCAAAAAATTAATAGGTCAAAAT
CAATTAATTAATTTATAGAC

Downstream 100 bases:

>100_bases
TTAATTATTATACGTTTAATTTAAAATTTTAAAGCGATGCCTAGCGGAAAGAAAAGAAAAAGACATAAAATGTCTACGCA
CAAGCGCAAAAAGAGACTGA

Product: DNA-binding protein HU

Products: NA

Alternate protein names: DNA-binding protein II; TL29 [H]

Number of amino acids: Translated: 90; Mature: 89

Protein sequence:

>90_residues
MTKADIVSEISKSTGIDKQTVLASVESFMDIVKSSLAQGENVYLRGFGSFVIKKRAQKTARNISKNTTIIIPEHNIPSFK
PAKTFIGEVK

Sequences:

>Translated_90_residues
MTKADIVSEISKSTGIDKQTVLASVESFMDIVKSSLAQGENVYLRGFGSFVIKKRAQKTARNISKNTTIIIPEHNIPSFK
PAKTFIGEVK
>Mature_89_residues
TKADIVSEISKSTGIDKQTVLASVESFMDIVKSSLAQGENVYLRGFGSFVIKKRAQKTARNISKNTTIIIPEHNIPSFKP
AKTFIGEVK

Specific function: Histone-like DNA-binding protein which is capable of wrapping DNA to stabilize it, and thus to prevent its denaturation under extreme environmental conditions [H]

COG id: COG0776

COG function: function code L; Bacterial nucleoid DNA-binding protein

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the bacterial histone-like protein family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000119
- InterPro:   IPR020816
- InterPro:   IPR010992 [H]

Pfam domain/function: PF00216 Bac_DNA_binding [H]

EC number: NA

Molecular weight: Translated: 9887; Mature: 9755

Theoretical pI: Translated: 10.59; Mature: 10.59

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
2.2 %Met     (Translated Protein)
2.2 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
1.1 %Met     (Mature Protein)
1.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTKADIVSEISKSTGIDKQTVLASVESFMDIVKSSLAQGENVYLRGFGSFVIKKRAQKTA
CCHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHCCCCEEEEHHHHHHHHHHHHHHH
RNISKNTTIIIPEHNIPSFKPAKTFIGEVK
HHCCCCCEEEEECCCCCCCCCHHHHHCCCC
>Mature Secondary Structure 
TKADIVSEISKSTGIDKQTVLASVESFMDIVKSSLAQGENVYLRGFGSFVIKKRAQKTA
CHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHCCCCEEEEHHHHHHHHHHHHHHH
RNISKNTTIIIPEHNIPSFKPAKTFIGEVK
HHCCCCCEEEEECCCCCCCCCHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 2226865 [H]