| Definition | Parabacteroides distasonis ATCC 8503 chromosome, complete genome. |
|---|---|
| Accession | NC_009615 |
| Length | 4,811,379 |
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The map label for this gene is 150008579
Identifier: 150008579
GI number: 150008579
Start: 2328498
End: 2329769
Strand: Reverse
Name: 150008579
Synonym: BDI_1965
Alternate gene names: NA
Gene position: 2329769-2328498 (Counterclockwise)
Preceding gene: 150008580
Following gene: 150008578
Centisome position: 48.42
GC content: 57.0
Gene sequence:
>1272_bases ATGTATAAGATGATTCTAAAACAACTCTGGAACGAGCGCAAGGGGAACTTGTTTATCTGGTTGGAAATGCTCGTGGTCTC TATCTTCCTGTGGTACGCGGCGGACGCCTTGTTCGTGATGTACAGACTCTACTCGCAGCCCTTGGGCTTTAACATCGAGC ATACGTATCATGTGAGTTTCGGCGTGATCCCGGAGGAAAGCCCCGATTATGACACGACCTCCGTGCATAGCGAGCGGGGA GGCGGGGATTACCTGACCTTGATGGACCGCATCCGCCGGAACCCCTCCGTGGAATCAATCTGTTTCACCACCGGCGTGCA TTTTCATTACCGGGGATCGAATCAATACGCCACGTTCCGGAAGGACTCGTTGATCCGTAATGGCTTCGTGCGCTTCGTCT CGCCCACCTATTTCGAGGTGTTCGGCGTGAAGACGGCAGAAGGCGGTTCCCCCTCGGAGTTGGTGGATGCCCTGCGCGAC AACCAAGTGGTGGTGACGGGCCGTGTAGCCGATGACTTCTTCGGTAACCCGGCGGCGGCCGTGCGCCAAGAGATCTATAT CACCGACCAAGGCTCTCGTGATAGCGTGGCCTACCGTATCGGTGGTGTCTGCGAGAAACAACGTTACTGCGAGTTCACCG GTTATGATTACGCCTACTATAAGCTGGTGGACGAGAACAAGGTGGCCGAGGAGGGCGATTGGGTCGGAGAGGGCCTGAAC ACCTTCATCCGGGTGAAGCCCGGTGCGGACGGCGCCGCTTTCGCCACCAACTTCCGGAAGGAGATGGAGCAGCAATTGTG CGTGGGCAATATCTATCTGAAGGATGTTTTCCCGATGTCCCATTACCGGGACCAGTTCCTTGAGCGTTGGTTGGATCAAG TCCGCCTTTACGTGGCGGGCATCGCCTTCTTCCTGCTGAATGTCCTGCTCGGCGTGGTGGGAACCTTCTGGTATCGTACG CAACAAAGGAGCGCCGAGATCGGCCTCCGTATGGCGATGGGAGCCACCCGCAAGGGCATATTCTGGCAATTGGTGAAGGA GGGCTTGGCGCTACTCACCATCGCTTTCATCCCCTCTACCGTCATCTTCGCCAACCTGCTGCATATGGAGGTGACGCAAG GCTCGGAGATACCGCCCGACATGGCCTCACGCCTGTTGTTCGGTTTCGTCTTCTCGTATGCGGTGATGGCTGCGATGATT GTCGTGGGAATCAGTTTTCCGTCTTACCGGGCCATGCGGATGCATCCGGCGGACGCCTTGCGGCAGGAATGA
Upstream 100 bases:
>100_bases GCCTTCCTGTTCTGCCTCGTGCTGAACCTGTTTTCCGCCGGCCTCCCGGCTTGGCGAATGTCAAGATTGAATATTACGGA CTCTATAAATGGTTGACGCT
Downstream 100 bases:
>100_bases TCAGACACGGACATCTGTGTTCGGGAATGAACCGACTGTTCGATAATGGACAGTGCTTTTTCAGGAAGATGCCATGGAAT CAATGAGATACGTTTCTGGC
Product: ABC transporter permease
Products: NA
Alternate protein names: Efflux ABC Transporter Permease Protein; ABC Transporter Permease Protein
Number of amino acids: Translated: 423; Mature: 423
Protein sequence:
>423_residues MYKMILKQLWNERKGNLFIWLEMLVVSIFLWYAADALFVMYRLYSQPLGFNIEHTYHVSFGVIPEESPDYDTTSVHSERG GGDYLTLMDRIRRNPSVESICFTTGVHFHYRGSNQYATFRKDSLIRNGFVRFVSPTYFEVFGVKTAEGGSPSELVDALRD NQVVVTGRVADDFFGNPAAAVRQEIYITDQGSRDSVAYRIGGVCEKQRYCEFTGYDYAYYKLVDENKVAEEGDWVGEGLN TFIRVKPGADGAAFATNFRKEMEQQLCVGNIYLKDVFPMSHYRDQFLERWLDQVRLYVAGIAFFLLNVLLGVVGTFWYRT QQRSAEIGLRMAMGATRKGIFWQLVKEGLALLTIAFIPSTVIFANLLHMEVTQGSEIPPDMASRLLFGFVFSYAVMAAMI VVGISFPSYRAMRMHPADALRQE
Sequences:
>Translated_423_residues MYKMILKQLWNERKGNLFIWLEMLVVSIFLWYAADALFVMYRLYSQPLGFNIEHTYHVSFGVIPEESPDYDTTSVHSERG GGDYLTLMDRIRRNPSVESICFTTGVHFHYRGSNQYATFRKDSLIRNGFVRFVSPTYFEVFGVKTAEGGSPSELVDALRD NQVVVTGRVADDFFGNPAAAVRQEIYITDQGSRDSVAYRIGGVCEKQRYCEFTGYDYAYYKLVDENKVAEEGDWVGEGLN TFIRVKPGADGAAFATNFRKEMEQQLCVGNIYLKDVFPMSHYRDQFLERWLDQVRLYVAGIAFFLLNVLLGVVGTFWYRT QQRSAEIGLRMAMGATRKGIFWQLVKEGLALLTIAFIPSTVIFANLLHMEVTQGSEIPPDMASRLLFGFVFSYAVMAAMI VVGISFPSYRAMRMHPADALRQE >Mature_423_residues MYKMILKQLWNERKGNLFIWLEMLVVSIFLWYAADALFVMYRLYSQPLGFNIEHTYHVSFGVIPEESPDYDTTSVHSERG GGDYLTLMDRIRRNPSVESICFTTGVHFHYRGSNQYATFRKDSLIRNGFVRFVSPTYFEVFGVKTAEGGSPSELVDALRD NQVVVTGRVADDFFGNPAAAVRQEIYITDQGSRDSVAYRIGGVCEKQRYCEFTGYDYAYYKLVDENKVAEEGDWVGEGLN TFIRVKPGADGAAFATNFRKEMEQQLCVGNIYLKDVFPMSHYRDQFLERWLDQVRLYVAGIAFFLLNVLLGVVGTFWYRT QQRSAEIGLRMAMGATRKGIFWQLVKEGLALLTIAFIPSTVIFANLLHMEVTQGSEIPPDMASRLLFGFVFSYAVMAAMI VVGISFPSYRAMRMHPADALRQE
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 48272; Mature: 48272
Theoretical pI: Translated: 6.52; Mature: 6.52
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.9 %Cys (Translated Protein) 3.5 %Met (Translated Protein) 4.5 %Cys+Met (Translated Protein) 0.9 %Cys (Mature Protein) 3.5 %Met (Mature Protein) 4.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MYKMILKQLWNERKGNLFIWLEMLVVSIFLWYAADALFVMYRLYSQPLGFNIEHTYHVSF CHHHHHHHHHCCCCCCEEEEHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCEEEEEEEE GVIPEESPDYDTTSVHSERGGGDYLTLMDRIRRNPSVESICFTTGVHFHYRGSNQYATFR ECCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHCCCCCCCEEEEECEEEEEECCCCEEEHH KDSLIRNGFVRFVSPTYFEVFGVKTAEGGSPSELVDALRDNQVVVTGRVADDFFGNPAAA HHHHHHCCHHHHCCCCEEEEEEEEECCCCCHHHHHHHHCCCCEEEEEEEHHHHCCCCHHH VRQEIYITDQGSRDSVAYRIGGVCEKQRYCEFTGYDYAYYKLVDENKVAEEGDWVGEGLN HHEEEEEECCCCCCCHHHHHCCHHHHCCCCCCCCCCEEEEEEECCCCCCCCCCHHHCCCC TFIRVKPGADGAAFATNFRKEMEQQLCVGNIYLKDVFPMSHYRDQFLERWLDQVRLYVAG EEEEEECCCCCHHHHHHHHHHHHHHHHHCCEEEECCCCHHHHHHHHHHHHHHHHHHHHHH IAFFLLNVLLGVVGTFWYRTQQRSAEIGLRMAMGATRKGIFWQLVKEGLALLTIAFIPST HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHH VIFANLLHMEVTQGSEIPPDMASRLLFGFVFSYAVMAAMIVVGISFPSYRAMRMHPADAL HHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEECCHHHH RQE CCC >Mature Secondary Structure MYKMILKQLWNERKGNLFIWLEMLVVSIFLWYAADALFVMYRLYSQPLGFNIEHTYHVSF CHHHHHHHHHCCCCCCEEEEHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCEEEEEEEE GVIPEESPDYDTTSVHSERGGGDYLTLMDRIRRNPSVESICFTTGVHFHYRGSNQYATFR ECCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHCCCCCCCEEEEECEEEEEECCCCEEEHH KDSLIRNGFVRFVSPTYFEVFGVKTAEGGSPSELVDALRDNQVVVTGRVADDFFGNPAAA HHHHHHCCHHHHCCCCEEEEEEEEECCCCCHHHHHHHHCCCCEEEEEEEHHHHCCCCHHH VRQEIYITDQGSRDSVAYRIGGVCEKQRYCEFTGYDYAYYKLVDENKVAEEGDWVGEGLN HHEEEEEECCCCCCCHHHHHCCHHHHCCCCCCCCCCEEEEEEECCCCCCCCCCHHHCCCC TFIRVKPGADGAAFATNFRKEMEQQLCVGNIYLKDVFPMSHYRDQFLERWLDQVRLYVAG EEEEEECCCCCHHHHHHHHHHHHHHHHHCCEEEECCCCHHHHHHHHHHHHHHHHHHHHHH IAFFLLNVLLGVVGTFWYRTQQRSAEIGLRMAMGATRKGIFWQLVKEGLALLTIAFIPST HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHH VIFANLLHMEVTQGSEIPPDMASRLLFGFVFSYAVMAAMIVVGISFPSYRAMRMHPADAL HHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEECCHHHH RQE CCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA