| Definition | Parabacteroides distasonis ATCC 8503 chromosome, complete genome. |
|---|---|
| Accession | NC_009615 |
| Length | 4,811,379 |
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The map label for this gene is 150008571
Identifier: 150008571
GI number: 150008571
Start: 2318701
End: 2319963
Strand: Reverse
Name: 150008571
Synonym: BDI_1957
Alternate gene names: NA
Gene position: 2319963-2318701 (Counterclockwise)
Preceding gene: 150008572
Following gene: 150008570
Centisome position: 48.22
GC content: 54.55
Gene sequence:
>1263_bases ATGATACAACATTTATTACAATTGATCTGGAACCAGCGCAAGCAAAACGCTTGGTTGTGGGCTGAGTTATTGCTGGTCTC GGTCTTCCTTTGGTTCCTTGTGGACTACCTGTATGTGATGGGGCGCACGTATACGGCTCCTCTGGGCTTCGATATCCGGC ATACGTACAGCATCGTGATCAGTAGCCTTTCGGAAAGAAGCCCGGATTATATCCCGAAGGAGAAGCGGGAGCGGCCGGAT GGTGTTCATCTGCTGACGGCGTTGGATCGCATCCGCACCTATCCCGGCGTGGAATCGGCCTGCCTTACGGATGGGGGGAT GCCTTATTATATGGGAAGCCGTAACCTCGTTTGGCGGATTGATACATTGCAGGTGCCCTGCCGCTATGCTTTCGTCACCC CGGAGTTCTTCGACGTGTTCCGTATCTATGATAAGGACGGCAAGACGGCTTCCTTGAAACGGGCCATCGAGGATAACAAC TCCATCGTAATCTCCGCCGACGTGGAGACGATGAATCCCGGCCTTTCCCTACTCGGGCAAAAGGCGTACCGGGGGAATGT GACCGACGAGATCGAGGAGACGATCCGTGGTATCAGCGTCCCCATCCGCCGTCATGAGTACACCAAGGCGGAACCCAACG TCTATAGGGCCCTGCGGCTAAGCCGGATGGAGGAAGGATACTATGAGGGGATGATAGATGCCGTGCGACTCTGCGTACGT GTCCGTCCGGATGTCGATAATGCTGATTTCCCCGCACGCTTCCGCAAGGATATGGCCGAACAGCTTCGGCTAGGCAACCT CTATCTGCTAGACGTACAGCCCTTGTCATATATTCGCGACGGTTATATCCGTTCGATCGGCGTAGAGAACGAGGTGAAAA CCCGTGTGGCGGTAGCCTGCTTCCTATTGGCGAATATATTCCTCGGCATCATCGGTACCTTCTGGTTCCGTACGGAATAT CGCAAAGGCGAGATGGGGCTTAGGATGGCCTTAGGCTCTACCCGCCGTCAGTTGAACTCGATCATGGTGGGAGAGGGTGT CCTATTGCTGGTCTTGGCGTTCATCCCGTCCTTACTCATCAGCTTCAACATCGCCCATATGGATTTGATAGATACCTATC AGCTTCCGTTCACGTGGCTGCGCTTCGCGATTTGCGGAGGGATTACGTTTGTCTTGATCGTCCTCATGATCATCTGTGGC GTATGGTATCCCGCCCGCTCGACAGCTCGCTTGGAGCCGGCGGAGGCTCTGCATTACGAGTGA
Upstream 100 bases:
>100_bases GCTTGGCGAGCCTCAAGGATGCGTATCATCTCGGCTCTCAACGAGAATGTTCATTAATCTCCTGCGTTGGATGATAGCTA TACTAAAATAATAGAAAGAT
Downstream 100 bases:
>100_bases TCAGGGTAGCTAGCCTGCTTTCGGGAGTGTCCGATAACGAGCCAGATGTTCGTTATCGGACACTTTTTTATGATATGGCT GTTGATATACAGCTGCTTAC
Product: ABC transporter permease
Products: NA
Alternate protein names: Efflux ABC Transporter Permease Protein; ABC Transporter Permease Component; ABC Transporter Permease Protein
Number of amino acids: Translated: 420; Mature: 420
Protein sequence:
>420_residues MIQHLLQLIWNQRKQNAWLWAELLLVSVFLWFLVDYLYVMGRTYTAPLGFDIRHTYSIVISSLSERSPDYIPKEKRERPD GVHLLTALDRIRTYPGVESACLTDGGMPYYMGSRNLVWRIDTLQVPCRYAFVTPEFFDVFRIYDKDGKTASLKRAIEDNN SIVISADVETMNPGLSLLGQKAYRGNVTDEIEETIRGISVPIRRHEYTKAEPNVYRALRLSRMEEGYYEGMIDAVRLCVR VRPDVDNADFPARFRKDMAEQLRLGNLYLLDVQPLSYIRDGYIRSIGVENEVKTRVAVACFLLANIFLGIIGTFWFRTEY RKGEMGLRMALGSTRRQLNSIMVGEGVLLLVLAFIPSLLISFNIAHMDLIDTYQLPFTWLRFAICGGITFVLIVLMIICG VWYPARSTARLEPAEALHYE
Sequences:
>Translated_420_residues MIQHLLQLIWNQRKQNAWLWAELLLVSVFLWFLVDYLYVMGRTYTAPLGFDIRHTYSIVISSLSERSPDYIPKEKRERPD GVHLLTALDRIRTYPGVESACLTDGGMPYYMGSRNLVWRIDTLQVPCRYAFVTPEFFDVFRIYDKDGKTASLKRAIEDNN SIVISADVETMNPGLSLLGQKAYRGNVTDEIEETIRGISVPIRRHEYTKAEPNVYRALRLSRMEEGYYEGMIDAVRLCVR VRPDVDNADFPARFRKDMAEQLRLGNLYLLDVQPLSYIRDGYIRSIGVENEVKTRVAVACFLLANIFLGIIGTFWFRTEY RKGEMGLRMALGSTRRQLNSIMVGEGVLLLVLAFIPSLLISFNIAHMDLIDTYQLPFTWLRFAICGGITFVLIVLMIICG VWYPARSTARLEPAEALHYE >Mature_420_residues MIQHLLQLIWNQRKQNAWLWAELLLVSVFLWFLVDYLYVMGRTYTAPLGFDIRHTYSIVISSLSERSPDYIPKEKRERPD GVHLLTALDRIRTYPGVESACLTDGGMPYYMGSRNLVWRIDTLQVPCRYAFVTPEFFDVFRIYDKDGKTASLKRAIEDNN SIVISADVETMNPGLSLLGQKAYRGNVTDEIEETIRGISVPIRRHEYTKAEPNVYRALRLSRMEEGYYEGMIDAVRLCVR VRPDVDNADFPARFRKDMAEQLRLGNLYLLDVQPLSYIRDGYIRSIGVENEVKTRVAVACFLLANIFLGIIGTFWFRTEY RKGEMGLRMALGSTRRQLNSIMVGEGVLLLVLAFIPSLLISFNIAHMDLIDTYQLPFTWLRFAICGGITFVLIVLMIICG VWYPARSTARLEPAEALHYE
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 48347; Mature: 48347
Theoretical pI: Translated: 7.81; Mature: 7.81
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.4 %Cys (Translated Protein) 3.1 %Met (Translated Protein) 4.5 %Cys+Met (Translated Protein) 1.4 %Cys (Mature Protein) 3.1 %Met (Mature Protein) 4.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MIQHLLQLIWNQRKQNAWLWAELLLVSVFLWFLVDYLYVMGRTYTAPLGFDIRHTYSIVI CHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCEECCCCCCHHHHHHHHH SSLSERSPDYIPKEKRERPDGVHLLTALDRIRTYPGVESACLTDGGMPYYMGSRNLVWRI HHHHHCCCCCCCCHHCCCCCCHHHHHHHHHHHCCCCCCHHHHCCCCCCEEECCCCEEEEE DTLQVPCRYAFVTPEFFDVFRIYDKDGKTASLKRAIEDNNSIVISADVETMNPGLSLLGQ EEEECCEEEEEECHHHHHHHHHHCCCCCHHHHHHHHCCCCCEEEEECCCCCCCCHHHHHC KAYRGNVTDEIEETIRGISVPIRRHEYTKAEPNVYRALRLSRMEEGYYEGMIDAVRLCVR HHHCCCCHHHHHHHHHHCCCCHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH VRPDVDNADFPARFRKDMAEQLRLGNLYLLDVQPLSYIRDGYIRSIGVENEVKTRVAVAC CCCCCCCCCCCHHHHHHHHHHHCCCCEEEEECCHHHHHHCCHHHHCCCCHHHHHHHHHHH FLLANIFLGIIGTFWFRTEYRKGEMGLRMALGSTRRQLNSIMVGEGVLLLVLAFIPSLLI HHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHH SFNIAHMDLIDTYQLPFTWLRFAICGGITFVLIVLMIICGVWYPARSTARLEPAEALHYE HHCHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHCCCC >Mature Secondary Structure MIQHLLQLIWNQRKQNAWLWAELLLVSVFLWFLVDYLYVMGRTYTAPLGFDIRHTYSIVI CHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCEECCCCCCHHHHHHHHH SSLSERSPDYIPKEKRERPDGVHLLTALDRIRTYPGVESACLTDGGMPYYMGSRNLVWRI HHHHHCCCCCCCCHHCCCCCCHHHHHHHHHHHCCCCCCHHHHCCCCCCEEECCCCEEEEE DTLQVPCRYAFVTPEFFDVFRIYDKDGKTASLKRAIEDNNSIVISADVETMNPGLSLLGQ EEEECCEEEEEECHHHHHHHHHHCCCCCHHHHHHHHCCCCCEEEEECCCCCCCCHHHHHC KAYRGNVTDEIEETIRGISVPIRRHEYTKAEPNVYRALRLSRMEEGYYEGMIDAVRLCVR HHHCCCCHHHHHHHHHHCCCCHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH VRPDVDNADFPARFRKDMAEQLRLGNLYLLDVQPLSYIRDGYIRSIGVENEVKTRVAVAC CCCCCCCCCCCHHHHHHHHHHHCCCCEEEEECCHHHHHHCCHHHHCCCCHHHHHHHHHHH FLLANIFLGIIGTFWFRTEYRKGEMGLRMALGSTRRQLNSIMVGEGVLLLVLAFIPSLLI HHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHH SFNIAHMDLIDTYQLPFTWLRFAICGGITFVLIVLMIICGVWYPARSTARLEPAEALHYE HHCHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA