| Definition | Parabacteroides distasonis ATCC 8503 chromosome, complete genome. |
|---|---|
| Accession | NC_009615 |
| Length | 4,811,379 |
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The map label for this gene is 150008560
Identifier: 150008560
GI number: 150008560
Start: 2306792
End: 2307889
Strand: Direct
Name: 150008560
Synonym: BDI_1946
Alternate gene names: NA
Gene position: 2306792-2307889 (Clockwise)
Preceding gene: 150008559
Following gene: 150008567
Centisome position: 47.94
GC content: 45.26
Gene sequence:
>1098_bases ATGGCAAAAACGAAAGAACAATTACTAAACATCTTGGATCAGTTCCAGTTGGACGAGAAAGTAGTTTCCGCTGAACCATT CGGAAACGGACACATTAATGATACATTGAAAGTGACCAACGAGAAAGGGGAGATCAAATACGTGCTACAGCGTATCAACC ATTTAATCTTCACCAATGTGGATATGCTGCAAAATAACATCCATGTGGTTACCACTCATATCCGCAAAAAGCTGGAGGAA AAAGGTGAAACGGATATCGACCGTAAGGTATTAACCTTCTTGCCGACTAAAGACGGGAAAAAATATTATTTCGATGGAGA TAGTTATTGGCGGGTATGCCTATTCATCCCTCGCAGCAAAAGCTATGAGGAAGTAACTCCTGAGCTTTCTTATGAGGCTG GCAAAGCGTTCGGTGATTTCCAGACCATGTTGTCCGATATACCCGAGGGTACGCTGGGCGAGACCATCCCGGATTTCCAT AATATGGAGTTCCGCTTGCGACAATTCCATGAGGCTGTAGCCGCTAATCCGGCAGGCCGGTTGGAAGAGGTGAAAGATTT GGTAGAGGAGATCGAGAAACGTGCCGAAGCGATGTGCATTCAAGAACGCCTGTACCGTGAGGGCCAATTGAAGAAACGCA CGAACCATTGCGATACAAAAGTTAACAATATGATGTTTGACGCTGATAGCGACAAGGTGCTTTGCGTGATCGACTTGGAC ACCGTGATGCCGGGCTTCGTCCTTTCCGATATCGGCGACTTTATCCGTACCGGAGCCAATACGGGTGCCGAGGACGATGA GAATCTGGATAACGTAAACGTTAATATGGAGATATTCAAAGCCTATACCCGTGGATACATGGAAAAGGCCAAGGCGTTCT TAACTCCTACCGAGATCAAATTGCTACCTTACGGTGGACGCTTATTGACTTATATGCAGACCGTTCGTTTCTTAACCGAT TATATCAACGGCGATACCTATTACAAGATCCATAGCCCGAAACATAACTTAATCCGTACGAAAGCCCAATTCAAGCTACT TCAAAGCCTAGAAGCCCATGCGGAAGAGATGGATCAGTTCATGAATCAATGGTTATAA
Upstream 100 bases:
>100_bases ACAAGAAATAAGATTTCTTTCTTTAAGAAATAAAAAAAGGTCACGATTTGTATCGTGGCCTTTTTTTGTATCTTTGCCGG AGTTAACATAATGAAATATC
Downstream 100 bases:
>100_bases TATAAAGTAACTAAGGAATATAAAAACGGGCGGGGTGACTCATCGATTCATCCCGCCCATTCTTTTTATTTCGTCCAATA ATCCAACACCGTAACCGCCG
Product: hypothetical protein
Products: NA
Alternate protein names: Mucin-Desulfating Sulfatase; Phosphotransferase Family; Homoserine/Choline Kinase Family Protein; Desulfatase Possibly For Mucin; N-Acetylhexosamine-1-Kinase NahK; Desulfatase; Phosphotransferase Family Protein; Phosphotransferase
Number of amino acids: Translated: 365; Mature: 364
Protein sequence:
>365_residues MAKTKEQLLNILDQFQLDEKVVSAEPFGNGHINDTLKVTNEKGEIKYVLQRINHLIFTNVDMLQNNIHVVTTHIRKKLEE KGETDIDRKVLTFLPTKDGKKYYFDGDSYWRVCLFIPRSKSYEEVTPELSYEAGKAFGDFQTMLSDIPEGTLGETIPDFH NMEFRLRQFHEAVAANPAGRLEEVKDLVEEIEKRAEAMCIQERLYREGQLKKRTNHCDTKVNNMMFDADSDKVLCVIDLD TVMPGFVLSDIGDFIRTGANTGAEDDENLDNVNVNMEIFKAYTRGYMEKAKAFLTPTEIKLLPYGGRLLTYMQTVRFLTD YINGDTYYKIHSPKHNLIRTKAQFKLLQSLEAHAEEMDQFMNQWL
Sequences:
>Translated_365_residues MAKTKEQLLNILDQFQLDEKVVSAEPFGNGHINDTLKVTNEKGEIKYVLQRINHLIFTNVDMLQNNIHVVTTHIRKKLEE KGETDIDRKVLTFLPTKDGKKYYFDGDSYWRVCLFIPRSKSYEEVTPELSYEAGKAFGDFQTMLSDIPEGTLGETIPDFH NMEFRLRQFHEAVAANPAGRLEEVKDLVEEIEKRAEAMCIQERLYREGQLKKRTNHCDTKVNNMMFDADSDKVLCVIDLD TVMPGFVLSDIGDFIRTGANTGAEDDENLDNVNVNMEIFKAYTRGYMEKAKAFLTPTEIKLLPYGGRLLTYMQTVRFLTD YINGDTYYKIHSPKHNLIRTKAQFKLLQSLEAHAEEMDQFMNQWL >Mature_364_residues AKTKEQLLNILDQFQLDEKVVSAEPFGNGHINDTLKVTNEKGEIKYVLQRINHLIFTNVDMLQNNIHVVTTHIRKKLEEK GETDIDRKVLTFLPTKDGKKYYFDGDSYWRVCLFIPRSKSYEEVTPELSYEAGKAFGDFQTMLSDIPEGTLGETIPDFHN MEFRLRQFHEAVAANPAGRLEEVKDLVEEIEKRAEAMCIQERLYREGQLKKRTNHCDTKVNNMMFDADSDKVLCVIDLDT VMPGFVLSDIGDFIRTGANTGAEDDENLDNVNVNMEIFKAYTRGYMEKAKAFLTPTEIKLLPYGGRLLTYMQTVRFLTDY INGDTYYKIHSPKHNLIRTKAQFKLLQSLEAHAEEMDQFMNQWL
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 42241; Mature: 42109
Theoretical pI: Translated: 5.22; Mature: 5.22
Prosite motif: PS00018 EF_HAND_1
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.1 %Cys (Translated Protein) 3.6 %Met (Translated Protein) 4.7 %Cys+Met (Translated Protein) 1.1 %Cys (Mature Protein) 3.3 %Met (Mature Protein) 4.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MAKTKEQLLNILDQFQLDEKVVSAEPFGNGHINDTLKVTNEKGEIKYVLQRINHLIFTNV CCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCEEEECCCCHHHHHHHHHHHHHHCCH DMLQNNIHVVTTHIRKKLEEKGETDIDRKVLTFLPTKDGKKYYFDGDSYWRVCLFIPRSK HHHHCCHHEEEHHHHHHHHHCCCCCHHHHHHHEECCCCCCEEEECCCCEEEEEEEECCCC SYEEVTPELSYEAGKAFGDFQTMLSDIPEGTLGETIPDFHNMEFRLRQFHEAVAANPAGR CHHHCCCCCCHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHHHHHHHCCCCHH LEEVKDLVEEIEKRAEAMCIQERLYREGQLKKRTNHCDTKVNNMMFDADSDKVLCVIDLD HHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHCEEEECCCCCEEEEEEHH TVMPGFVLSDIGDFIRTGANTGAEDDENLDNVNVNMEIFKAYTRGYMEKAKAFLTPTEIK HHCCHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCEEE LLPYGGRLLTYMQTVRFLTDYINGDTYYKIHSPKHNLIRTKAQFKLLQSLEAHAEEMDQF EEECCCHHHHHHHHHHHHHHHHCCCEEEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHH MNQWL HHHCC >Mature Secondary Structure AKTKEQLLNILDQFQLDEKVVSAEPFGNGHINDTLKVTNEKGEIKYVLQRINHLIFTNV CCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCEEEECCCCHHHHHHHHHHHHHHCCH DMLQNNIHVVTTHIRKKLEEKGETDIDRKVLTFLPTKDGKKYYFDGDSYWRVCLFIPRSK HHHHCCHHEEEHHHHHHHHHCCCCCHHHHHHHEECCCCCCEEEECCCCEEEEEEEECCCC SYEEVTPELSYEAGKAFGDFQTMLSDIPEGTLGETIPDFHNMEFRLRQFHEAVAANPAGR CHHHCCCCCCHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHHHHHHHCCCCHH LEEVKDLVEEIEKRAEAMCIQERLYREGQLKKRTNHCDTKVNNMMFDADSDKVLCVIDLD HHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHCEEEECCCCCEEEEEEHH TVMPGFVLSDIGDFIRTGANTGAEDDENLDNVNVNMEIFKAYTRGYMEKAKAFLTPTEIK HHCCHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCEEE LLPYGGRLLTYMQTVRFLTDYINGDTYYKIHSPKHNLIRTKAQFKLLQSLEAHAEEMDQF EEECCCHHHHHHHHHHHHHHHHCCCEEEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHH MNQWL HHHCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA