| Definition | Parabacteroides distasonis ATCC 8503 chromosome, complete genome. |
|---|---|
| Accession | NC_009615 |
| Length | 4,811,379 |
Click here to switch to the map view.
The map label for this gene is 150008519
Identifier: 150008519
GI number: 150008519
Start: 2261847
End: 2262716
Strand: Reverse
Name: 150008519
Synonym: BDI_1905
Alternate gene names: NA
Gene position: 2262716-2261847 (Counterclockwise)
Preceding gene: 150008520
Following gene: 150008513
Centisome position: 47.03
GC content: 36.55
Gene sequence:
>870_bases ATGAAAGAATATATAAAAAATATAATTGCGGAAAGTCTCAAAGACGAAGTAGATGTTGATAGGGAGTGGGAGCGTTTGTT TTCATCCATAGAGAAAAAAACTATTTCCAAAATGAAAACAAGAAGGCTATTCCTTCAATACATGAAATATGCCGCTGCCG TGGTTTTGGGCATAGGTGTTTCACTATCAACGTTGTATCTTACGAATCAAGAGAACTTATCGACAGTTGGAAATTATAAA TTAGTAACGAGCAAAGGAGAGAAGAGCTATTTGCAATTACCGGATGGTACGAGGGTTTGGCTTAACTCTTGTACAACTCT AGAATATGCGGAGAACTACGGCCATTCCAATCGTAGCATTTATTTGGATGGAGAAGCTTATTTTGAAGTCGCAAAGAATA AAGACTTACCATTTGTTGTAAAGGCAAACGGTATTGATGTGAAAGCGATTGGTACGGCCTTTAATGTTTCCGCTTATATG GAAGACTCGCAACTAACCACAACCTTGTTCAATGGCAAGGTCGCCGTACAACCTACGTTGACTAAACAAGAGGTCTTACT TGAGCCTAACCAAGTGGCGGTTTATGATAAAAGTAGAAATAAGATAGAAGTAGTACCTTACGATAAGAAACTATTCGCTC AATGGAGAGGAGGTTTCTTGTCTTTTAAAATGATGTATCTGCAAGATATAACAAAGTTGTTGGAAAGGAACTATAACGTT GTATTTCGTTATGAAAATCAAGGGATAAAAAAATTAAGGTTTAGCGGTAGTTTCCGTAACAACGAAGATTTATCGGAGAT TCTCAATGTGATAAAGACGAATACGGGTATTCGCTATCAAATACTGAAAGATACTATAGTAATCAAATAA
Upstream 100 bases:
>100_bases GATTATCTGGTTTCTTGAAAAAATATAATACAAAAATCTATCAATCTTGTAAGTAGCACATCGTTTTGAAGTGTCATACA TATAGAATCGAGAAAAAACA
Downstream 100 bases:
>100_bases TAAATCATTGAATTATTAATCTTAAAAACAGTCTTGCTTATGAGAAATGGATGATTTTTAGTGTAATACGGATAAAAAAC GTAACATTGTTAGATCTTAT
Product: putative anti-sigma factor
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 289; Mature: 289
Protein sequence:
>289_residues MKEYIKNIIAESLKDEVDVDREWERLFSSIEKKTISKMKTRRLFLQYMKYAAAVVLGIGVSLSTLYLTNQENLSTVGNYK LVTSKGEKSYLQLPDGTRVWLNSCTTLEYAENYGHSNRSIYLDGEAYFEVAKNKDLPFVVKANGIDVKAIGTAFNVSAYM EDSQLTTTLFNGKVAVQPTLTKQEVLLEPNQVAVYDKSRNKIEVVPYDKKLFAQWRGGFLSFKMMYLQDITKLLERNYNV VFRYENQGIKKLRFSGSFRNNEDLSEILNVIKTNTGIRYQILKDTIVIK
Sequences:
>Translated_289_residues MKEYIKNIIAESLKDEVDVDREWERLFSSIEKKTISKMKTRRLFLQYMKYAAAVVLGIGVSLSTLYLTNQENLSTVGNYK LVTSKGEKSYLQLPDGTRVWLNSCTTLEYAENYGHSNRSIYLDGEAYFEVAKNKDLPFVVKANGIDVKAIGTAFNVSAYM EDSQLTTTLFNGKVAVQPTLTKQEVLLEPNQVAVYDKSRNKIEVVPYDKKLFAQWRGGFLSFKMMYLQDITKLLERNYNV VFRYENQGIKKLRFSGSFRNNEDLSEILNVIKTNTGIRYQILKDTIVIK >Mature_289_residues MKEYIKNIIAESLKDEVDVDREWERLFSSIEKKTISKMKTRRLFLQYMKYAAAVVLGIGVSLSTLYLTNQENLSTVGNYK LVTSKGEKSYLQLPDGTRVWLNSCTTLEYAENYGHSNRSIYLDGEAYFEVAKNKDLPFVVKANGIDVKAIGTAFNVSAYM EDSQLTTTLFNGKVAVQPTLTKQEVLLEPNQVAVYDKSRNKIEVVPYDKKLFAQWRGGFLSFKMMYLQDITKLLERNYNV VFRYENQGIKKLRFSGSFRNNEDLSEILNVIKTNTGIRYQILKDTIVIK
Specific function: Unknown
COG id: COG3712
COG function: function code PT; Fe2+-dicitrate sensor, membrane component
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 33257; Mature: 33257
Theoretical pI: Translated: 9.64; Mature: 9.64
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.3 %Cys (Translated Protein) 2.1 %Met (Translated Protein) 2.4 %Cys+Met (Translated Protein) 0.3 %Cys (Mature Protein) 2.1 %Met (Mature Protein) 2.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKEYIKNIIAESLKDEVDVDREWERLFSSIEKKTISKMKTRRLFLQYMKYAAAVVLGIGV CHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC SLSTLYLTNQENLSTVGNYKLVTSKGEKSYLQLPDGTRVWLNSCTTLEYAENYGHSNRSI EEEEEEEECCCCCCCCCCEEEEECCCCCCEEECCCCCEEEECCCCEEHHHHHCCCCCCEE YLDGEAYFEVAKNKDLPFVVKANGIDVKAIGTAFNVSAYMEDSQLTTTLFNGKVAVQPTL EECCHHEEEEECCCCCCEEEEECCEEEEEECCEEEEEEEECCCCEEEEEECCEEEEECCC TKQEVLLEPNQVAVYDKSRNKIEVVPYDKKLFAQWRGGFLSFKMMYLQDITKLLERNYNV CCHHHEECCCEEEEEECCCCEEEEECCCHHHHHHHCCCHHHHHHHHHHHHHHHHHCCCCE VFRYENQGIKKLRFSGSFRNNEDLSEILNVIKTNTGIRYQILKDTIVIK EEEECCCCCEEEEECCCCCCCHHHHHHHHHHHCCCCEEEEEEEEEEEEC >Mature Secondary Structure MKEYIKNIIAESLKDEVDVDREWERLFSSIEKKTISKMKTRRLFLQYMKYAAAVVLGIGV CHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC SLSTLYLTNQENLSTVGNYKLVTSKGEKSYLQLPDGTRVWLNSCTTLEYAENYGHSNRSI EEEEEEEECCCCCCCCCCEEEEECCCCCCEEECCCCCEEEECCCCEEHHHHHCCCCCCEE YLDGEAYFEVAKNKDLPFVVKANGIDVKAIGTAFNVSAYMEDSQLTTTLFNGKVAVQPTL EECCHHEEEEECCCCCCEEEEECCEEEEEECCEEEEEEEECCCCEEEEEECCEEEEECCC TKQEVLLEPNQVAVYDKSRNKIEVVPYDKKLFAQWRGGFLSFKMMYLQDITKLLERNYNV CCHHHEECCCEEEEEECCCCEEEEECCCHHHHHHHCCCHHHHHHHHHHHHHHHHHCCCCE VFRYENQGIKKLRFSGSFRNNEDLSEILNVIKTNTGIRYQILKDTIVIK EEEECCCCCEEEEECCCCCCCHHHHHHHHHHHCCCCEEEEEEEEEEEEC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA