| Definition | Parabacteroides distasonis ATCC 8503 chromosome, complete genome. |
|---|---|
| Accession | NC_009615 |
| Length | 4,811,379 |
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The map label for this gene is 150008474
Identifier: 150008474
GI number: 150008474
Start: 2213118
End: 2214131
Strand: Direct
Name: 150008474
Synonym: BDI_1860
Alternate gene names: NA
Gene position: 2213118-2214131 (Clockwise)
Preceding gene: 150008473
Following gene: 150008475
Centisome position: 46.0
GC content: 43.0
Gene sequence:
>1014_bases ATGTCACGACTTGAGAACATACAAAATTCCTTCAAGTCTATCCAAGCAAAGACTAAGGCTTTTTTCCACGGAGACAGATG GAAAGAGGTCTTGGTCTTTTTCTTTTTCGCCCTTTTGGCTTTCGGTTTCTGGCTACTCCAAAGCTTGCAGCAGGAATATG AGATAGAACTTGTTTTTCCGGTTAAGTATAAGAACGTACCTGCCGATATAGCGTTTAATGCCCCTGAGGTGGAAACGATT ACCGCAAAGGTAAAAGACAAGGGTAGCGTTTTACTCAACTATACTTTTGGAAGATCGTTTGCTCCGATTGAAGTGAACAT GAAGAATACGAAGGAGAAAAATGGTTCGGTTCAAGTAAGTAAAAGGCAGATCGAGAACGATATTCAAAAACAATTGATAG CCACTACGGCATTACAAAGTTTTGATCCGCAACAAATAGATATGGATTTCAGTCAGCGGGTCCATAAGGAAATACCGGTC GTCTTTAATGGCGATATTCATCTGGAAGCCGGCTTTCAACTATCCGGGGATATCCGAATCACCCCTCAAAAGATCAACGC TTATGCCACCGCGGCGATCTTGGATACACTGACCTCGGTTAAGACGGTCTTCACCGAGGTTAAAAAGGCGAATAAAAACA TTACGAGAACCGTACAACTGATCAAGGTAGACGGCGTTAACTTCGATCCGGAAAGTGTATCCATCACGATTCCGATAGAG GAGTACACGGAGAAGACATTGGAAATACCTGTCTCTTGCAGTCATATACCGCCACATTATACGGTACGTATGTTTCCGGC GGTCGTAAAAGTGACTTGCAGTGTGCCCTTGTCCCGATTCAAAGGACTTTCGGAAGATATGTTCTCGATTCATATACCTT TTGAGGATCTGGAGCAAAACGTATCTGGTACCCTACCCGTCAAACTCACCAAGAAACCAGACTGGGTGCATACGGCAATC TTATTGCCAGATAAGGTAGAATTTATTTTGGAACACAACAATAAGCATGATTAA
Upstream 100 bases:
>100_bases TAATCGAGGTAGCGGATGGAGTACGTATCCGTGTAGATAAAACTTCTATTTTCGCTTCAGCGGAAGACGCTCAGCAGCAG AAATAATCTAACTACAGAAT
Downstream 100 bases:
>100_bases AATAGGTATTACAGGAGGGATCGGGAGCGGCAAATCCGTCGTAGCCTCTTTATTAGCGTTATCCGGTGTACCCGTATACA TAGCGGACGAGGAAAGTAAA
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 337; Mature: 336
Protein sequence:
>337_residues MSRLENIQNSFKSIQAKTKAFFHGDRWKEVLVFFFFALLAFGFWLLQSLQQEYEIELVFPVKYKNVPADIAFNAPEVETI TAKVKDKGSVLLNYTFGRSFAPIEVNMKNTKEKNGSVQVSKRQIENDIQKQLIATTALQSFDPQQIDMDFSQRVHKEIPV VFNGDIHLEAGFQLSGDIRITPQKINAYATAAILDTLTSVKTVFTEVKKANKNITRTVQLIKVDGVNFDPESVSITIPIE EYTEKTLEIPVSCSHIPPHYTVRMFPAVVKVTCSVPLSRFKGLSEDMFSIHIPFEDLEQNVSGTLPVKLTKKPDWVHTAI LLPDKVEFILEHNNKHD
Sequences:
>Translated_337_residues MSRLENIQNSFKSIQAKTKAFFHGDRWKEVLVFFFFALLAFGFWLLQSLQQEYEIELVFPVKYKNVPADIAFNAPEVETI TAKVKDKGSVLLNYTFGRSFAPIEVNMKNTKEKNGSVQVSKRQIENDIQKQLIATTALQSFDPQQIDMDFSQRVHKEIPV VFNGDIHLEAGFQLSGDIRITPQKINAYATAAILDTLTSVKTVFTEVKKANKNITRTVQLIKVDGVNFDPESVSITIPIE EYTEKTLEIPVSCSHIPPHYTVRMFPAVVKVTCSVPLSRFKGLSEDMFSIHIPFEDLEQNVSGTLPVKLTKKPDWVHTAI LLPDKVEFILEHNNKHD >Mature_336_residues SRLENIQNSFKSIQAKTKAFFHGDRWKEVLVFFFFALLAFGFWLLQSLQQEYEIELVFPVKYKNVPADIAFNAPEVETIT AKVKDKGSVLLNYTFGRSFAPIEVNMKNTKEKNGSVQVSKRQIENDIQKQLIATTALQSFDPQQIDMDFSQRVHKEIPVV FNGDIHLEAGFQLSGDIRITPQKINAYATAAILDTLTSVKTVFTEVKKANKNITRTVQLIKVDGVNFDPESVSITIPIEE YTEKTLEIPVSCSHIPPHYTVRMFPAVVKVTCSVPLSRFKGLSEDMFSIHIPFEDLEQNVSGTLPVKLTKKPDWVHTAIL LPDKVEFILEHNNKHD
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 38302; Mature: 38171
Theoretical pI: Translated: 7.03; Mature: 7.03
Prosite motif: PS01095 CHITINASE_18
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.6 %Cys (Translated Protein) 1.5 %Met (Translated Protein) 2.1 %Cys+Met (Translated Protein) 0.6 %Cys (Mature Protein) 1.2 %Met (Mature Protein) 1.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSRLENIQNSFKSIQAKTKAFFHGDRWKEVLVFFFFALLAFGFWLLQSLQQEYEIELVFP CCHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCEEEEEEE VKYKNVPADIAFNAPEVETITAKVKDKGSVLLNYTFGRSFAPIEVNMKNTKEKNGSVQVS EEECCCCCCEEECCCCCEEEEEEECCCCCEEEEEECCCEECEEEEECCCCCCCCCCEEEH KRQIENDIQKQLIATTALQSFDPQQIDMDFSQRVHKEIPVVFNGDIHLEAGFQLSGDIRI HHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHCCCEEECCCEEEEECCEECCCEEE TPQKINAYATAAILDTLTSVKTVFTEVKKANKNITRTVQLIKVDGVNFDPESVSITIPIE CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEEEEECCCCCCCCCEEEEEEHH EYTEKTLEIPVSCSHIPPHYTVRMFPAVVKVTCSVPLSRFKGLSEDMFSIHIPFEDLEQN HHCCHHEECCEEECCCCCCCEEEEEHEEEEEEECCCHHHCCCCCCCCEEEECCHHHHHCC VSGTLPVKLTKKPDWVHTAILLPDKVEFILEHNNKHD CCCCEEEEECCCCCEEEEEEECCCCEEEEEECCCCCC >Mature Secondary Structure SRLENIQNSFKSIQAKTKAFFHGDRWKEVLVFFFFALLAFGFWLLQSLQQEYEIELVFP CHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCEEEEEEE VKYKNVPADIAFNAPEVETITAKVKDKGSVLLNYTFGRSFAPIEVNMKNTKEKNGSVQVS EEECCCCCCEEECCCCCEEEEEEECCCCCEEEEEECCCEECEEEEECCCCCCCCCCEEEH KRQIENDIQKQLIATTALQSFDPQQIDMDFSQRVHKEIPVVFNGDIHLEAGFQLSGDIRI HHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHCCCEEECCCEEEEECCEECCCEEE TPQKINAYATAAILDTLTSVKTVFTEVKKANKNITRTVQLIKVDGVNFDPESVSITIPIE CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEEEEECCCCCCCCCEEEEEEHH EYTEKTLEIPVSCSHIPPHYTVRMFPAVVKVTCSVPLSRFKGLSEDMFSIHIPFEDLEQN HHCCHHEECCEEECCCCCCCEEEEEHEEEEEEECCCHHHCCCCCCCCEEEECCHHHHHCC VSGTLPVKLTKKPDWVHTAILLPDKVEFILEHNNKHD CCCCEEEEECCCCCEEEEEEECCCCEEEEEECCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA