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The map label for this gene is yibD [C]

Identifier: 150008460

GI number: 150008460

Start: 2197141

End: 2198070

Strand: Reverse

Name: yibD [C]

Synonym: BDI_1844

Alternate gene names: 150008460

Gene position: 2198070-2197141 (Counterclockwise)

Preceding gene: 150008461

Following gene: 150008459

Centisome position: 45.68

GC content: 34.84

Gene sequence:

>930_bases
ATGTTGATTAGTGTAGTATTGCCGGCTTATAATGTTCAAGATACGATAGGGGAATCTATCGATAGTATTTTAAGCCAAAC
ATTTACGGACTTTGAGTTGATCATTATCAATGACGGATCGCAGGATAATACAGAAGAGGTGATTCATGCTTATTCGGATA
AGAGAATTCGTTATTATCGGAATGAAAAAAATGAGGGTTTGATCTATACATTGAATAGAGGATTGGACTTGGCTCAAGGG
AAATATATAGCACGGATGGATGCTGATGATGTTTCTCTTCCAACACGTTTTGAAAAGCAAGTCAAGGTGATGGAGGAAAG
TCCAAATATCGTAGTTTGTGGAACGCAAATCATTCTTTTTGGAGTAGATACGGCTAAGAGATTCACTCTGTTTTTGCCAG
AAGAATCGGAAGATCTGAAAAATCTATTGTTTATTCAGACTTGTTTTGCTCATCCAACGGTAATGGTTCGTCGGCAAGTG
CTCATTGATAACGAGGTGAGGTATGATGCTGATTATCCTCATGCGGAGGATTATAAGATGTGGATTGATTTATCTTTGTT
GGGTGAGTTTTATAATATACAGGAACCGTTGTTGAGATATAGATTGTCGGATGGGCAAGTAAGTCATAAATTTAGTGATG
TCCAGAAACGGACTGCATCTGCTTGTCGTAGGTTTTTAATTTCTGCACGGTTTAAGGATGAAAAGTTGGATCGTCAAATC
GAAAATAGTATAGATATAAGTACAATTTGTTATATAAAAAAGAAAGAGTACCCACGAGAATTATTGGAAGTACTTTATTC
CTCTTTAAGAAAGTATAACTTTAAATGTTTGTGTTATTTGTTTGTTAGTGGTGATATTTTTCGATTTGAAATTGTTGTTG
CATTGGCTTTATTAAAGAGATTTATTATAAAGAAAGATAGACTATTATGA

Upstream 100 bases:

>100_bases
ATAAATAATACGACAGGCAAATTATCAGCTTATGTGGATACATGGCATTTGCAGGATATTTTAGAAGTATCTCCTTATGT
GGATAAAATATTAGAAAAGC

Downstream 100 bases:

>100_bases
ATGTGTCTAATAGAGGGTATCTATATTTTGTTCGTTTGTCAGGAAAAATAATTCTGCTATTTTGTGTGTTTTCTTATGTG
TATCAAATACATTATAAGAT

Product: glycosyl transferase family protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 309; Mature: 309

Protein sequence:

>309_residues
MLISVVLPAYNVQDTIGESIDSILSQTFTDFELIIINDGSQDNTEEVIHAYSDKRIRYYRNEKNEGLIYTLNRGLDLAQG
KYIARMDADDVSLPTRFEKQVKVMEESPNIVVCGTQIILFGVDTAKRFTLFLPEESEDLKNLLFIQTCFAHPTVMVRRQV
LIDNEVRYDADYPHAEDYKMWIDLSLLGEFYNIQEPLLRYRLSDGQVSHKFSDVQKRTASACRRFLISARFKDEKLDRQI
ENSIDISTICYIKKKEYPRELLEVLYSSLRKYNFKCLCYLFVSGDIFRFEIVVALALLKRFIIKKDRLL

Sequences:

>Translated_309_residues
MLISVVLPAYNVQDTIGESIDSILSQTFTDFELIIINDGSQDNTEEVIHAYSDKRIRYYRNEKNEGLIYTLNRGLDLAQG
KYIARMDADDVSLPTRFEKQVKVMEESPNIVVCGTQIILFGVDTAKRFTLFLPEESEDLKNLLFIQTCFAHPTVMVRRQV
LIDNEVRYDADYPHAEDYKMWIDLSLLGEFYNIQEPLLRYRLSDGQVSHKFSDVQKRTASACRRFLISARFKDEKLDRQI
ENSIDISTICYIKKKEYPRELLEVLYSSLRKYNFKCLCYLFVSGDIFRFEIVVALALLKRFIIKKDRLL
>Mature_309_residues
MLISVVLPAYNVQDTIGESIDSILSQTFTDFELIIINDGSQDNTEEVIHAYSDKRIRYYRNEKNEGLIYTLNRGLDLAQG
KYIARMDADDVSLPTRFEKQVKVMEESPNIVVCGTQIILFGVDTAKRFTLFLPEESEDLKNLLFIQTCFAHPTVMVRRQV
LIDNEVRYDADYPHAEDYKMWIDLSLLGEFYNIQEPLLRYRLSDGQVSHKFSDVQKRTASACRRFLISARFKDEKLDRQI
ENSIDISTICYIKKKEYPRELLEVLYSSLRKYNFKCLCYLFVSGDIFRFEIVVALALLKRFIIKKDRLL

Specific function: Unknown

COG id: COG0463

COG function: function code M; Glycosyltransferases involved in cell wall biogenesis

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the glycosyltransferase 2 family [H]

Homologues:

Organism=Escherichia coli, GI1790044, Length=115, Percent_Identity=36.5217391304348, Blast_Score=81, Evalue=7e-17,
Organism=Escherichia coli, GI1788372, Length=98, Percent_Identity=35.7142857142857, Blast_Score=69, Evalue=4e-13,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001173 [H]

Pfam domain/function: PF00535 Glycos_transf_2 [H]

EC number: 2.-.-.- [C]

Molecular weight: Translated: 36160; Mature: 36160

Theoretical pI: Translated: 5.82; Mature: 5.82

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.9 %Cys     (Translated Protein)
1.6 %Met     (Translated Protein)
3.6 %Cys+Met (Translated Protein)
1.9 %Cys     (Mature Protein)
1.6 %Met     (Mature Protein)
3.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLISVVLPAYNVQDTIGESIDSILSQTFTDFELIIINDGSQDNTEEVIHAYSDKRIRYYR
CEEEEEECCCCCHHHHHHHHHHHHHHCCCCEEEEEEECCCCCCHHHHHHHHCCCEEEEEE
NEKNEGLIYTLNRGLDLAQGKYIARMDADDVSLPTRFEKQVKVMEESPNIVVCGTQIILF
CCCCCCEEEEECCCCCCCCCCEEEEECCCCCCCCHHHHHHHHHHHCCCCEEEECCEEEEE
GVDTAKRFTLFLPEESEDLKNLLFIQTCFAHPTVMVRRQVLIDNEVRYDADYPHAEDYKM
ECCCCCEEEEECCCCHHHHHHHHHHHHHHCCCHHHHHHHHHCCCCEEECCCCCCCCCEEE
WIDLSLLGEFYNIQEPLLRYRLSDGQVSHKFSDVQKRTASACRRFLISARFKDEKLDRQI
EEEHHHHHHHHCHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHH
ENSIDISTICYIKKKEYPRELLEVLYSSLRKYNFKCLCYLFVSGDIFRFEIVVALALLKR
HCCCCEEEEEEEECCCCHHHHHHHHHHHHHHCCCEEEEEEEECCCCHHHHHHHHHHHHHH
FIIKKDRLL
HHHHHCCCC
>Mature Secondary Structure
MLISVVLPAYNVQDTIGESIDSILSQTFTDFELIIINDGSQDNTEEVIHAYSDKRIRYYR
CEEEEEECCCCCHHHHHHHHHHHHHHCCCCEEEEEEECCCCCCHHHHHHHHCCCEEEEEE
NEKNEGLIYTLNRGLDLAQGKYIARMDADDVSLPTRFEKQVKVMEESPNIVVCGTQIILF
CCCCCCEEEEECCCCCCCCCCEEEEECCCCCCCCHHHHHHHHHHHCCCCEEEECCEEEEE
GVDTAKRFTLFLPEESEDLKNLLFIQTCFAHPTVMVRRQVLIDNEVRYDADYPHAEDYKM
ECCCCCEEEEECCCCHHHHHHHHHHHHHHCCCHHHHHHHHHCCCCEEECCCCCCCCCEEE
WIDLSLLGEFYNIQEPLLRYRLSDGQVSHKFSDVQKRTASACRRFLISARFKDEKLDRQI
EEEHHHHHHHHCHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHH
ENSIDISTICYIKKKEYPRELLEVLYSSLRKYNFKCLCYLFVSGDIFRFEIVVALALLKR
HCCCCEEEEEEEECCCCHHHHHHHHHHHHHHCCCEEEEEEEECCCCHHHHHHHHHHHHHH
FIIKKDRLL
HHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 7542800 [H]