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The map label for this gene is hupE [H]

Identifier: 150008428

GI number: 150008428

Start: 2158678

End: 2159727

Strand: Direct

Name: hupE [H]

Synonym: BDI_1810

Alternate gene names: 150008428

Gene position: 2158678-2159727 (Clockwise)

Preceding gene: 150008427

Following gene: 150008429

Centisome position: 44.87

GC content: 53.05

Gene sequence:

>1050_bases
ATGGATATACACTTGAATTGCCCGATTCCTTTTACCGACTCAGACCGTGTGCTACTGGCGCACGGAGGAGGAGGACGCAT
GACACACCAACTGATCAGCCAAGTATTTTATCCGGCTTTCCGGAACCCATTATTGGAGCAGGATCATGACGGATGCGTGT
TTCTTATGGAAGAAGGGCGACTGGCCTACTCTACCGACTCCTTCGTGGTAGACCCGATCTTTTTCCCCGGAGGAGATATC
GGTGATCTGGCGATCAACGGGACCGTTAACGATCTGGCTTGTTGCGGTGCCCGTCCTTTGTATCTGACCGCCGGGTTTAT
ACTGGAAGAGGGCTTGCCTCTAGCAGATCTTCAGCGTATCGTACAATCCATGAAACGTGCGGCGGAGCGTGCCGGCGTAC
AGATCGTAGCCGGGGACACAAAAGTGGTGGAACGGGGCAAGTGCGATAAATTGTTTATCAACACCAGTGGGATCGGGATC
GTCCCTCCGGGCATACGAATCGCCCCAGACCAAGCCACTCCCGGCGATGTCGTCATTTGTAGCGGCCCGATTGGTCTACA
TGGTATCACGATCCTTTCCGCACGGGAAAGCTTGGGATTCGAGACGGATCTAAAAAGTGATACCGCTTCGCTAAACATTA
TGATTTCTGAGCTGTTACATACTATAGGAGAGGTACATGTCTTACGTGATCCCACCCGAGGTGGCGTAAGCGGAACCCTC
AACGAGATCGCCCAAGACGCTGGTGTGGATATCCTGCTGGACGAAGACGCCCTGCCTATTCCTGAAGCGGTACGTGCCGC
ATCCGAGATGCTAGGATTAGACCCGCTCTATATAGCGAACGAAGGATTAGTTCTTGTGATCCTGCCGGAAAGCCGTGCGG
AACAAGCGTTACCCCTTATGAGAGGTTTCGAGGAGGGCAGGCAAGCGACCGTTATCGGTCGTATCACCAAGCAAAGCGGA
GAGCAAGCCCGGGTCAAGATGAAGACATTATACGGTAACTACCGGATCATCGATATGCTAAGCGGGGAACAACTCCCCCG
TATTTGTTAG

Upstream 100 bases:

>100_bases
CCATTTCGGGAAGGCCTGCCATCCCACCCATCCGCTGGGAGCCCCGATGGTCTCCTCGGAAGGGGTTTGTGCCGCTTATT
ATAGATATAAATAGAAAGAT

Downstream 100 bases:

>100_bases
AATACTTAATTGCTGAGATATGGAAAATAAAAGACCGTCCGTTTACGAAGAGTGCCGTCAGAAAGGCATCTCCCGCCGGG
ACTTCCTGAAGTTCTGTACC

Product: hydrogenase expression/formation protein HypE

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 349; Mature: 349

Protein sequence:

>349_residues
MDIHLNCPIPFTDSDRVLLAHGGGGRMTHQLISQVFYPAFRNPLLEQDHDGCVFLMEEGRLAYSTDSFVVDPIFFPGGDI
GDLAINGTVNDLACCGARPLYLTAGFILEEGLPLADLQRIVQSMKRAAERAGVQIVAGDTKVVERGKCDKLFINTSGIGI
VPPGIRIAPDQATPGDVVICSGPIGLHGITILSARESLGFETDLKSDTASLNIMISELLHTIGEVHVLRDPTRGGVSGTL
NEIAQDAGVDILLDEDALPIPEAVRAASEMLGLDPLYIANEGLVLVILPESRAEQALPLMRGFEEGRQATVIGRITKQSG
EQARVKMKTLYGNYRIIDMLSGEQLPRIC

Sequences:

>Translated_349_residues
MDIHLNCPIPFTDSDRVLLAHGGGGRMTHQLISQVFYPAFRNPLLEQDHDGCVFLMEEGRLAYSTDSFVVDPIFFPGGDI
GDLAINGTVNDLACCGARPLYLTAGFILEEGLPLADLQRIVQSMKRAAERAGVQIVAGDTKVVERGKCDKLFINTSGIGI
VPPGIRIAPDQATPGDVVICSGPIGLHGITILSARESLGFETDLKSDTASLNIMISELLHTIGEVHVLRDPTRGGVSGTL
NEIAQDAGVDILLDEDALPIPEAVRAASEMLGLDPLYIANEGLVLVILPESRAEQALPLMRGFEEGRQATVIGRITKQSG
EQARVKMKTLYGNYRIIDMLSGEQLPRIC
>Mature_349_residues
MDIHLNCPIPFTDSDRVLLAHGGGGRMTHQLISQVFYPAFRNPLLEQDHDGCVFLMEEGRLAYSTDSFVVDPIFFPGGDI
GDLAINGTVNDLACCGARPLYLTAGFILEEGLPLADLQRIVQSMKRAAERAGVQIVAGDTKVVERGKCDKLFINTSGIGI
VPPGIRIAPDQATPGDVVICSGPIGLHGITILSARESLGFETDLKSDTASLNIMISELLHTIGEVHVLRDPTRGGVSGTL
NEIAQDAGVDILLDEDALPIPEAVRAASEMLGLDPLYIANEGLVLVILPESRAEQALPLMRGFEEGRQATVIGRITKQSG
EQARVKMKTLYGNYRIIDMLSGEQLPRIC

Specific function: May be involved in the maturation of the nifE hydrogenase [H]

COG id: COG0309

COG function: function code O; Hydrogenase maturation factor

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the hypE family [H]

Homologues:

Organism=Escherichia coli, GI226510967, Length=340, Percent_Identity=47.6470588235294, Blast_Score=293, Evalue=9e-81,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000728
- InterPro:   IPR010918
- InterPro:   IPR011854
- InterPro:   IPR016188 [H]

Pfam domain/function: PF00586 AIRS; PF02769 AIRS_C [H]

EC number: NA

Molecular weight: Translated: 37566; Mature: 37566

Theoretical pI: Translated: 4.56; Mature: 4.56

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.0 %Cys     (Translated Protein)
2.6 %Met     (Translated Protein)
4.6 %Cys+Met (Translated Protein)
2.0 %Cys     (Mature Protein)
2.6 %Met     (Mature Protein)
4.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MDIHLNCPIPFTDSDRVLLAHGGGGRMTHQLISQVFYPAFRNPLLEQDHDGCVFLMEEGR
CEEEEECCCCCCCCCCEEEEECCCCHHHHHHHHHHHHHHHCCCCCCCCCCCEEEEEECCE
LAYSTDSFVVDPIFFPGGDIGDLAINGTVNDLACCGARPLYLTAGFILEEGLPLADLQRI
EEEECCCEEEEEEECCCCCCCCEEECCCCHHHHHCCCCCEEEEECHHHHCCCCHHHHHHH
VQSMKRAAERAGVQIVAGDTKVVERGKCDKLFINTSGIGIVPPGIRIAPDQATPGDVVIC
HHHHHHHHHHCCEEEEECCHHEECCCCCCEEEEECCCCEEECCCCEECCCCCCCCCEEEE
SGPIGLHGITILSARESLGFETDLKSDTASLNIMISELLHTIGEVHVLRDPTRGGVSGTL
CCCCCCCEEEEEECHHHCCCCCCCCCCCHHHHHHHHHHHHHHCCEEEEECCCCCCCCHHH
NEIAQDAGVDILLDEDALPIPEAVRAASEMLGLDPLYIANEGLVLVILPESRAEQALPLM
HHHHHHCCCEEEECCCCCCCHHHHHHHHHHHCCCCEEEECCCEEEEEECCCCHHHHHHHH
RGFEEGRQATVIGRITKQSGEQARVKMKTLYGNYRIIDMLSGEQLPRIC
HHHHCCCEEEEEEEEECCCCCHHEEEEEEEECCEEEEEECCCCCCCCCC
>Mature Secondary Structure
MDIHLNCPIPFTDSDRVLLAHGGGGRMTHQLISQVFYPAFRNPLLEQDHDGCVFLMEEGR
CEEEEECCCCCCCCCCEEEEECCCCHHHHHHHHHHHHHHHCCCCCCCCCCCEEEEEECCE
LAYSTDSFVVDPIFFPGGDIGDLAINGTVNDLACCGARPLYLTAGFILEEGLPLADLQRI
EEEECCCEEEEEEECCCCCCCCEEECCCCHHHHHCCCCCEEEEECHHHHCCCCHHHHHHH
VQSMKRAAERAGVQIVAGDTKVVERGKCDKLFINTSGIGIVPPGIRIAPDQATPGDVVIC
HHHHHHHHHHCCEEEEECCHHEECCCCCCEEEEECCCCEEECCCCEECCCCCCCCCEEEE
SGPIGLHGITILSARESLGFETDLKSDTASLNIMISELLHTIGEVHVLRDPTRGGVSGTL
CCCCCCCEEEEEECHHHCCCCCCCCCCCHHHHHHHHHHHHHHCCEEEEECCCCCCCCHHH
NEIAQDAGVDILLDEDALPIPEAVRAASEMLGLDPLYIANEGLVLVILPESRAEQALPLM
HHHHHHCCCEEEECCCCCCCHHHHHHHHHHHCCCCEEEECCCEEEEEECCCCHHHHHHHH
RGFEEGRQATVIGRITKQSGEQARVKMKTLYGNYRIIDMLSGEQLPRIC
HHHHCCCEEEEEEEEECCCCCHHEEEEEEEECCEEEEEECCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 1526470 [H]