| Definition | Parabacteroides distasonis ATCC 8503 chromosome, complete genome. |
|---|---|
| Accession | NC_009615 |
| Length | 4,811,379 |
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The map label for this gene is yfbL [C]
Identifier: 150008393
GI number: 150008393
Start: 2102132
End: 2103136
Strand: Reverse
Name: yfbL [C]
Synonym: BDI_1767
Alternate gene names: 150008393
Gene position: 2103136-2102132 (Counterclockwise)
Preceding gene: 150008394
Following gene: 150008392
Centisome position: 43.71
GC content: 50.55
Gene sequence:
>1005_bases ATGAAAAAAGCAGGATTACTCTTAATGTCGCTGGCATTAAGTACGGCTCTTTGGGCGGAAAGTCCGGAGAAGAAAGGTTT GGACGTGATAAATAGATCGACCGCCGAGGCGCATATCGGTTTCTTGGCCGATGATGATCTGGAGGGCCGTGAGGCCGGTT TCCGTGGAGGCCGTATAGCGGGAGATTATATCGTGGCGAACTTGAAGTCTTTAGGTATCGATCCCGTGGGCGATTCCTAT TACCATCCGTTCGAGGCTTACCATCTGGAACGCCAGAAAAGAGGAGCCCGTTGGCAAGTCCACCCGGACTCGGTGGCCGC TATCAAGCAGACCGGTGTTTTCCAGAAGCTATCCTTGAATAATATATTGGGTAAGATAGAGGGGAAGAACCCGAACGAGA TCGTGATTGTCGGCGCTCACTATGACCATCTGGGTATCGACCCGATGCTGGATGGCGACCAGATCTATAACGGGGCGGAC GATAACGCCTCCGGAGTCTCTGCCGTTTTGCAGATAGCGAGGGCTTTCCTTGCCACGGGCCAGCAACCGGAGCGAACCGT TGTATTCGCTTTCTGGGACGGTGAGGAGAAAGGGCTTCTCGGATCGAAAGCCTTCGTTCAGTCTTTTCCAGAGATAAAGA ACGTGAAAGGATATTTGAATTTCGATATGATCGGCCGTAACAATAACGAGGCGAAGCCTACCCATGTGGTTTATTTCTAT ACGGAGGCGCACCCTGCTTTCGGCGATTGGCTGAAGAACGATATCAAGAAATACAACTTGAATCTGGCACCGGATTATCG TCCGTGGGATAACCCGGTAGGAGGGAGTGATAACGGTTCCTTCGCAAAGATAGGTATCCCTATTATCTGGTATCATACCG ACGGGCATCCGGATTACCATCAACCGAGCGACCATGCCGACCGGATTAATTGGGACAAGGTGGTGAATATCACGAAGGCC TCGTTCCTTAATATGTGGTATATGGCGAATGAGAAAGATTTTTAG
Upstream 100 bases:
>100_bases TTTTTGTGCCCTTTCCTTTCCTTCTCCTTCGCGTATCAGGGAAATTACTTATATTTGTGAATGAAAAAGCTAAAACAATA ATCATTTGAACACAAAAGCG
Downstream 100 bases:
>100_bases AGATTATACTTCTTTTTCAATAGAAGATATCTAATAAAAGTAAGTTAACTTCATCGGCGAAGTAAGTTAACTTACTTTGG CATTTTAATTAACTTACTTT
Product: aminopeptidase
Products: NA
Alternate protein names: SGAP [H]
Number of amino acids: Translated: 334; Mature: 334
Protein sequence:
>334_residues MKKAGLLLMSLALSTALWAESPEKKGLDVINRSTAEAHIGFLADDDLEGREAGFRGGRIAGDYIVANLKSLGIDPVGDSY YHPFEAYHLERQKRGARWQVHPDSVAAIKQTGVFQKLSLNNILGKIEGKNPNEIVIVGAHYDHLGIDPMLDGDQIYNGAD DNASGVSAVLQIARAFLATGQQPERTVVFAFWDGEEKGLLGSKAFVQSFPEIKNVKGYLNFDMIGRNNNEAKPTHVVYFY TEAHPAFGDWLKNDIKKYNLNLAPDYRPWDNPVGGSDNGSFAKIGIPIIWYHTDGHPDYHQPSDHADRINWDKVVNITKA SFLNMWYMANEKDF
Sequences:
>Translated_334_residues MKKAGLLLMSLALSTALWAESPEKKGLDVINRSTAEAHIGFLADDDLEGREAGFRGGRIAGDYIVANLKSLGIDPVGDSY YHPFEAYHLERQKRGARWQVHPDSVAAIKQTGVFQKLSLNNILGKIEGKNPNEIVIVGAHYDHLGIDPMLDGDQIYNGAD DNASGVSAVLQIARAFLATGQQPERTVVFAFWDGEEKGLLGSKAFVQSFPEIKNVKGYLNFDMIGRNNNEAKPTHVVYFY TEAHPAFGDWLKNDIKKYNLNLAPDYRPWDNPVGGSDNGSFAKIGIPIIWYHTDGHPDYHQPSDHADRINWDKVVNITKA SFLNMWYMANEKDF >Mature_334_residues MKKAGLLLMSLALSTALWAESPEKKGLDVINRSTAEAHIGFLADDDLEGREAGFRGGRIAGDYIVANLKSLGIDPVGDSY YHPFEAYHLERQKRGARWQVHPDSVAAIKQTGVFQKLSLNNILGKIEGKNPNEIVIVGAHYDHLGIDPMLDGDQIYNGAD DNASGVSAVLQIARAFLATGQQPERTVVFAFWDGEEKGLLGSKAFVQSFPEIKNVKGYLNFDMIGRNNNEAKPTHVVYFY TEAHPAFGDWLKNDIKKYNLNLAPDYRPWDNPVGGSDNGSFAKIGIPIIWYHTDGHPDYHQPSDHADRINWDKVVNITKA SFLNMWYMANEKDF
Specific function: Specific for larger hydrophobic acids, especially leucine. No cleavage occurs if the next residue is proline [H]
COG id: COG2234
COG function: function code R; Predicted aminopeptidases
Gene ontology:
Cell location: Secreted [H]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the peptidase M28 family. M28A subfamily [H]
Homologues:
Organism=Saccharomyces cerevisiae, GI6320623, Length=174, Percent_Identity=33.9080459770115, Blast_Score=72, Evalue=2e-13,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR007484 [H]
Pfam domain/function: PF04389 Peptidase_M28 [H]
EC number: =3.4.11.24 [H]
Molecular weight: Translated: 37236; Mature: 37236
Theoretical pI: Translated: 6.09; Mature: 6.09
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 1.8 %Met (Translated Protein) 1.8 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 1.8 %Met (Mature Protein) 1.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKKAGLLLMSLALSTALWAESPEKKGLDVINRSTAEAHIGFLADDDLEGREAGFRGGRIA CCCHHHHHHHHHHHHHHHCCCCCCCCCHHHCCCCCHHEEEEEECCCCCCCCCCCCCCEEE GDYIVANLKSLGIDPVGDSYYHPFEAYHLERQKRGARWQVHPDSVAAIKQTGVFQKLSLN HHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHCCCEEEECCCHHHHHHHCCCHHHHHHH NILGKIEGKNPNEIVIVGAHYDHLGIDPMLDGDQIYNGADDNASGVSAVLQIARAFLATG HHHEEECCCCCCEEEEEECCCCCCCCCCCCCCHHHCCCCCCCHHHHHHHHHHHHHHHHCC QQPERTVVFAFWDGEEKGLLGSKAFVQSFPEIKNVKGYLNFDMIGRNNNEAKPTHVVYFY CCCCEEEEEEEECCCCCCCCCCHHHHHHCHHHHCCCEEEEEEEEECCCCCCCCEEEEEEE TEAHPAFGDWLKNDIKKYNLNLAPDYRPWDNPVGGSDNGSFAKIGIPIIWYHTDGHPDYH ECCCCCHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCEEEECCEEEEEECCCCCCCC QPSDHADRINWDKVVNITKASFLNMWYMANEKDF CCCCCCCCCCHHHHEEEHHHHHEEEEEECCCCCC >Mature Secondary Structure MKKAGLLLMSLALSTALWAESPEKKGLDVINRSTAEAHIGFLADDDLEGREAGFRGGRIA CCCHHHHHHHHHHHHHHHCCCCCCCCCHHHCCCCCHHEEEEEECCCCCCCCCCCCCCEEE GDYIVANLKSLGIDPVGDSYYHPFEAYHLERQKRGARWQVHPDSVAAIKQTGVFQKLSLN HHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHCCCEEEECCCHHHHHHHCCCHHHHHHH NILGKIEGKNPNEIVIVGAHYDHLGIDPMLDGDQIYNGADDNASGVSAVLQIARAFLATG HHHEEECCCCCCEEEEEECCCCCCCCCCCCCCHHHCCCCCCCHHHHHHHHHHHHHHHHCC QQPERTVVFAFWDGEEKGLLGSKAFVQSFPEIKNVKGYLNFDMIGRNNNEAKPTHVVYFY CCCCEEEEEEEECCCCCCCCCCHHHHHHCHHHHCCCEEEEEEEEECCCCCCCCEEEEEEE TEAHPAFGDWLKNDIKKYNLNLAPDYRPWDNPVGGSDNGSFAKIGIPIIWYHTDGHPDYH ECCCCCHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCEEEECCEEEEEECCCCCCCC QPSDHADRINWDKVVNITKASFLNMWYMANEKDF CCCCCCCCCCHHHHEEEHHHHHEEEEEECCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 8665903; 2503378; 8444149; 9048953 [H]