Click here to switch to the map view.

The map label for this gene is ycfX [C]

Identifier: 150008375

GI number: 150008375

Start: 2074373

End: 2075230

Strand: Reverse

Name: ycfX [C]

Synonym: BDI_1749

Alternate gene names: 150008375

Gene position: 2075230-2074373 (Counterclockwise)

Preceding gene: 150008376

Following gene: 150008374

Centisome position: 43.13

GC content: 52.56

Gene sequence:

>858_bases
ATGAGTGTAGAGAAGAAAAACGCTTATATCGGAGTGGATTTAGGGGGGACGAATATGCGTGCCGGCCGTATCGTAGGGGA
TCGATTAGTGGCTCAGGGGAGCGCCCCGACTCCCAAGGACGCCGCGGATTGCGAGGAGACATTGGAGGCTTTGATAGAGG
TGATCCGTTCCGTGTGGGACGAGAGTGTGGTAGCTATCGGTATCGGTGTGCCGAGCGTGGTGGATCGTGAGAAGGGGATC
GTATATAACGTGGTGAATATCCCGCATTGGGAGGAGGTACATTTGAAGGAGATATTGGAGGCTTGCTTCTCCGTGCCGGT
TTATGTGGATAACGACGCGAATTGCTTCGCTCTGGGTGAGCGTATCTTTGGCGAAGGAAAGACGGTTGATAACTTCGTGG
GTCTCACCTTGGGTACGGGCTTGGGGGGTGGAATTATCCAGAATGGCAAGCTGTTGGCCGACGCTAATTGTGGCTCGGGA
GAATTTGGCATGATTCCCTACCAAGGTCATATCTTGGAATATTTCTGTAGCGGTTCCTATTTCATGAACGTATGGGGCGT
GGATGGGAAGGAGATGTACACCCGTGCGATGCGGAAGGACGAGCAGGCGCTGGAGGCTTACCGGCAGTTGGGCGTACATG
TGGCCGCCGCTATCAAGATCGTGGTATTGACGGTAGATCCGGAGATGATCGTCTTCGGAGGCTCGGTGACCGCCGCCCAT
GAGTTGTTTGAGGAGAGCATGTATGAGGACTTGAAGGATTTCGCTTATCCGAACTCTATCAAGAACTTGAAGATACGTTT
CTCTAAGCTGGAGAATCCGGGGCTATTCGGTGCCGCTTCCCTTTGTTATGATAAATAA

Upstream 100 bases:

>100_bases
GATGTATTAAATTTATCAGTTTAAAAGGTGATGTTATTCGTAACATTGCCTTTTTTGTTAGCTTTGTGGGAGTATAATCT
AATTTAATATCGTGGAAAGA

Downstream 100 bases:

>100_bases
AGACGGATAATCAATTGTTTACTTAAATCTGATTCATACCATGAGACATGTATTTTGTAGGAAGGTCGTTTTCCTTTTGG
CCGCTTTACTGGTTGTATGC

Product: transcriptional regulator

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 285; Mature: 284

Protein sequence:

>285_residues
MSVEKKNAYIGVDLGGTNMRAGRIVGDRLVAQGSAPTPKDAADCEETLEALIEVIRSVWDESVVAIGIGVPSVVDREKGI
VYNVVNIPHWEEVHLKEILEACFSVPVYVDNDANCFALGERIFGEGKTVDNFVGLTLGTGLGGGIIQNGKLLADANCGSG
EFGMIPYQGHILEYFCSGSYFMNVWGVDGKEMYTRAMRKDEQALEAYRQLGVHVAAAIKIVVLTVDPEMIVFGGSVTAAH
ELFEESMYEDLKDFAYPNSIKNLKIRFSKLENPGLFGAASLCYDK

Sequences:

>Translated_285_residues
MSVEKKNAYIGVDLGGTNMRAGRIVGDRLVAQGSAPTPKDAADCEETLEALIEVIRSVWDESVVAIGIGVPSVVDREKGI
VYNVVNIPHWEEVHLKEILEACFSVPVYVDNDANCFALGERIFGEGKTVDNFVGLTLGTGLGGGIIQNGKLLADANCGSG
EFGMIPYQGHILEYFCSGSYFMNVWGVDGKEMYTRAMRKDEQALEAYRQLGVHVAAAIKIVVLTVDPEMIVFGGSVTAAH
ELFEESMYEDLKDFAYPNSIKNLKIRFSKLENPGLFGAASLCYDK
>Mature_284_residues
SVEKKNAYIGVDLGGTNMRAGRIVGDRLVAQGSAPTPKDAADCEETLEALIEVIRSVWDESVVAIGIGVPSVVDREKGIV
YNVVNIPHWEEVHLKEILEACFSVPVYVDNDANCFALGERIFGEGKTVDNFVGLTLGTGLGGGIIQNGKLLADANCGSGE
FGMIPYQGHILEYFCSGSYFMNVWGVDGKEMYTRAMRKDEQALEAYRQLGVHVAAAIKIVVLTVDPEMIVFGGSVTAAHE
LFEESMYEDLKDFAYPNSIKNLKIRFSKLENPGLFGAASLCYDK

Specific function: Unknown

COG id: COG1940

COG function: function code KG; Transcriptional regulator/sugar kinase

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the ROK (nagC/xylR) family [H]

Homologues:

Organism=Homo sapiens, GI190014632, Length=164, Percent_Identity=34.7560975609756, Blast_Score=71, Evalue=1e-12,
Organism=Homo sapiens, GI298566325, Length=164, Percent_Identity=34.7560975609756, Blast_Score=71, Evalue=1e-12,
Organism=Homo sapiens, GI298566315, Length=164, Percent_Identity=34.7560975609756, Blast_Score=70, Evalue=2e-12,
Organism=Homo sapiens, GI4885285, Length=164, Percent_Identity=34.7560975609756, Blast_Score=70, Evalue=2e-12,
Organism=Escherichia coli, GI1787363, Length=262, Percent_Identity=30.1526717557252, Blast_Score=88, Evalue=6e-19,
Organism=Escherichia coli, GI87081733, Length=301, Percent_Identity=24.9169435215947, Blast_Score=77, Evalue=2e-15,
Organism=Escherichia coli, GI1787878, Length=249, Percent_Identity=21.285140562249, Blast_Score=75, Evalue=4e-15,

Paralogues:

None

Copy number: 10-20 Molecules/Cell [C]

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000600 [H]

Pfam domain/function: PF00480 ROK [H]

EC number: NA

Molecular weight: Translated: 31033; Mature: 30902

Theoretical pI: Translated: 4.51; Mature: 4.51

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.1 %Cys     (Translated Protein)
2.8 %Met     (Translated Protein)
4.9 %Cys+Met (Translated Protein)
2.1 %Cys     (Mature Protein)
2.5 %Met     (Mature Protein)
4.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSVEKKNAYIGVDLGGTNMRAGRIVGDRLVAQGSAPTPKDAADCEETLEALIEVIRSVWD
CCCCCCCCEEEEEECCCCCCCCEEHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHCC
ESVVAIGIGVPSVVDREKGIVYNVVNIPHWEEVHLKEILEACFSVPVYVDNDANCFALGE
CCEEEEECCCCHHHCCCCCEEEEEECCCCCCHHHHHHHHHHHHCCCEEECCCCCEEEECH
RIFGEGKTVDNFVGLTLGTGLGGGIIQNGKLLADANCGSGEFGMIPYQGHILEYFCSGSY
HHHCCCCCHHHEECEEECCCCCCCEEECCEEEEECCCCCCCCCCCCCCCHHHHEECCCCE
FMNVWGVDGKEMYTRAMRKDEQALEAYRQLGVHVAAAIKIVVLTVDPEMIVFGGSVTAAH
EEEEECCCHHHHHHHHHHCHHHHHHHHHHHHHHEEEEEEEEEEEECCCEEEECCCHHHHH
ELFEESMYEDLKDFAYPNSIKNLKIRFSKLENPGLFGAASLCYDK
HHHHHHHHHHHHHHCCCCCCCCEEEEEEECCCCCCEEHHHHHCCC
>Mature Secondary Structure 
SVEKKNAYIGVDLGGTNMRAGRIVGDRLVAQGSAPTPKDAADCEETLEALIEVIRSVWD
CCCCCCCEEEEEECCCCCCCCEEHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHCC
ESVVAIGIGVPSVVDREKGIVYNVVNIPHWEEVHLKEILEACFSVPVYVDNDANCFALGE
CCEEEEECCCCHHHCCCCCEEEEEECCCCCCHHHHHHHHHHHHCCCEEECCCCCEEEECH
RIFGEGKTVDNFVGLTLGTGLGGGIIQNGKLLADANCGSGEFGMIPYQGHILEYFCSGSY
HHHCCCCCHHHEECEEECCCCCCCEEECCEEEEECCCCCCCCCCCCCCCHHHHEECCCCE
FMNVWGVDGKEMYTRAMRKDEQALEAYRQLGVHVAAAIKIVVLTVDPEMIVFGGSVTAAH
EEEEECCCHHHHHHHHHHCHHHHHHHHHHHHHHEEEEEEEEEEEECCCEEEECCCHHHHH
ELFEESMYEDLKDFAYPNSIKNLKIRFSKLENPGLFGAASLCYDK
HHHHHHHHHHHHHHCCCCCCCCEEEEEEECCCCCCEEHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 11792842; 8177218 [H]