| Definition | Parabacteroides distasonis ATCC 8503 chromosome, complete genome. |
|---|---|
| Accession | NC_009615 |
| Length | 4,811,379 |
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The map label for this gene is fecR [C]
Identifier: 150008309
GI number: 150008309
Start: 1987498
End: 1988469
Strand: Reverse
Name: fecR [C]
Synonym: BDI_1678
Alternate gene names: 150008309
Gene position: 1988469-1987498 (Counterclockwise)
Preceding gene: 150008311
Following gene: 150008308
Centisome position: 41.33
GC content: 47.22
Gene sequence:
>972_bases ATGAGCGAAGATACGAGAACGATATTGAAGAAGTTGATGCGGGATGCTCTGGATGAGAAAGATCGGCAACGTTTGCTGTG TGACCCAAAAGTGGAAGAGCGTATGCGTTCCCAATGGGACGAGGCTGCGGATCGCGTGAATCCCGTGGTGGGGAATCGCA TGTGGGAACGAATCATAGCCCGGACAATGGCGACAAACGGTGTCCGTAAACTCTGGGTCTATAAGATTACGGCGATAGCC GCCTCCATATTGCTACTTTTAGGTGTAGGAAGCGTAGTTTATTGGTCTCATACGAAAGAAGATCAATATATATATGTAAT GGCCTCCGGTGTCCGTTGCATAGAGTCGGTTTCCTTATCGGACGGTACGACCGTGAGAATGGGGCCTAATAGCCAATTGA TCTACCCAAAGAGTTTCGATGGCAAGACCCGTGATGTGGAATTAAAAGGGCAAGCCTTCTTCGACGTGGCGAAAGATCGG GAAAGACCATTTACCGTGCATACCAAGAACATGGATGTAACGGCCTTGGGCACGGCCTTCGAGGTTTTCAATTATGATTC CGAGAGCAAGTTGGAGACGATCCTGCTAAACGGTAAGGTGAAGATTGGCTTGGGAGGTCCCAATATGAAGAACAGGCGTG AGGTGATATTGAATCCGAACGAGATGTTGGTTTTCGACAAACAAGCGAATACCGTTAGAGTTAAGACGGTTAATGCCGAG GAGTATTCGGGTTGGCGTAACGGTGTCCTCAGTTTTGAGAACGAACGCTTGAGCATGATCCTTACCCGTCTGGAGCCTTG GTTCGGGCGGAAGATAAAATGCCCGAAGGAGATAGCGGAGAAATATCGGTTTACGTTTAAGGTACGGGATGAATCCTTGG AGCGAATCCTGTTTATGCTGAGCAATACGTCACCCATTAAATACAGAGAGAAAGACAATGAATATGAACTATATATAAAG GGAGATAAATGA
Upstream 100 bases:
>100_bases TCCGTTATATTTCTTGTATACCTAAGTGAAATTTTTTTATCACCCAATAGGGGGAAGGAAAACATGGCGTGTATTTATAA ATAGAACAAGAATAATAAAC
Downstream 100 bases:
>100_bases GTGTCTAACGTTAAATTCTAAAAGATATGCTTGTTAACAGTTCTTAAGTCTAATAAAAAAACAGGAGGACAAACTAGGTT TCTCCTCCTGAGCAAATGTT
Product: putative anti-sigma factor
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 323; Mature: 322
Protein sequence:
>323_residues MSEDTRTILKKLMRDALDEKDRQRLLCDPKVEERMRSQWDEAADRVNPVVGNRMWERIIARTMATNGVRKLWVYKITAIA ASILLLLGVGSVVYWSHTKEDQYIYVMASGVRCIESVSLSDGTTVRMGPNSQLIYPKSFDGKTRDVELKGQAFFDVAKDR ERPFTVHTKNMDVTALGTAFEVFNYDSESKLETILLNGKVKIGLGGPNMKNRREVILNPNEMLVFDKQANTVRVKTVNAE EYSGWRNGVLSFENERLSMILTRLEPWFGRKIKCPKEIAEKYRFTFKVRDESLERILFMLSNTSPIKYREKDNEYELYIK GDK
Sequences:
>Translated_323_residues MSEDTRTILKKLMRDALDEKDRQRLLCDPKVEERMRSQWDEAADRVNPVVGNRMWERIIARTMATNGVRKLWVYKITAIA ASILLLLGVGSVVYWSHTKEDQYIYVMASGVRCIESVSLSDGTTVRMGPNSQLIYPKSFDGKTRDVELKGQAFFDVAKDR ERPFTVHTKNMDVTALGTAFEVFNYDSESKLETILLNGKVKIGLGGPNMKNRREVILNPNEMLVFDKQANTVRVKTVNAE EYSGWRNGVLSFENERLSMILTRLEPWFGRKIKCPKEIAEKYRFTFKVRDESLERILFMLSNTSPIKYREKDNEYELYIK GDK >Mature_322_residues SEDTRTILKKLMRDALDEKDRQRLLCDPKVEERMRSQWDEAADRVNPVVGNRMWERIIARTMATNGVRKLWVYKITAIAA SILLLLGVGSVVYWSHTKEDQYIYVMASGVRCIESVSLSDGTTVRMGPNSQLIYPKSFDGKTRDVELKGQAFFDVAKDRE RPFTVHTKNMDVTALGTAFEVFNYDSESKLETILLNGKVKIGLGGPNMKNRREVILNPNEMLVFDKQANTVRVKTVNAEE YSGWRNGVLSFENERLSMILTRLEPWFGRKIKCPKEIAEKYRFTFKVRDESLERILFMLSNTSPIKYREKDNEYELYIKG DK
Specific function: Regulation Of Iron Dicitrate Transport. In The Absence Of Citrate Fecr Inactivates Feci. Fecr Is Probably A Sensor That Recognizes Iron Dicitrate In The Periplasm. [C]
COG id: COG3712
COG function: function code PT; Fe2+-dicitrate sensor, membrane component
Gene ontology:
Cell location: Periplasmic Protein [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 37408; Mature: 37276
Theoretical pI: Translated: 9.60; Mature: 9.60
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.9 %Cys (Translated Protein) 3.7 %Met (Translated Protein) 4.6 %Cys+Met (Translated Protein) 0.9 %Cys (Mature Protein) 3.4 %Met (Mature Protein) 4.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSEDTRTILKKLMRDALDEKDRQRLLCDPKVEERMRSQWDEAADRVNPVVGNRMWERIIA CCCHHHHHHHHHHHHHHCHHHHHHCCCCCHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHH RTMATNGVRKLWVYKITAIAASILLLLGVGSVVYWSHTKEDQYIYVMASGVRCIESVSLS HHHHCCCHHHHHHHHHHHHHHHHHHHHCCCCEEEEECCCCCCEEEEEECCCHHHHHCCCC DGTTVRMGPNSQLIYPKSFDGKTRDVELKGQAFFDVAKDRERPFTVHTKNMDVTALGTAF CCCEEEECCCCCEEECCCCCCCCEEEEECCCEEEEHHCCCCCCEEEEECCCCEEEECCEE EVFNYDSESKLETILLNGKVKIGLGGPNMKNRREVILNPNEMLVFDKQANTVRVKTVNAE EEECCCCCCCEEEEEEECEEEEEECCCCCCCCCEEEECCCEEEEEECCCCEEEEEEECCH EYSGWRNGVLSFENERLSMILTRLEPWFGRKIKCPKEIAEKYRFTFKVRDESLERILFML HHCCHHCCCEEECCCHHHHHHHHHCHHCCCCCCCHHHHHHHHEEEEEECHHHHHHHHHHH SNTSPIKYREKDNEYELYIKGDK CCCCCEEEECCCCCEEEEEECCC >Mature Secondary Structure SEDTRTILKKLMRDALDEKDRQRLLCDPKVEERMRSQWDEAADRVNPVVGNRMWERIIA CCHHHHHHHHHHHHHHCHHHHHHCCCCCHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHH RTMATNGVRKLWVYKITAIAASILLLLGVGSVVYWSHTKEDQYIYVMASGVRCIESVSLS HHHHCCCHHHHHHHHHHHHHHHHHHHHCCCCEEEEECCCCCCEEEEEECCCHHHHHCCCC DGTTVRMGPNSQLIYPKSFDGKTRDVELKGQAFFDVAKDRERPFTVHTKNMDVTALGTAF CCCEEEECCCCCEEECCCCCCCCEEEEECCCEEEEHHCCCCCCEEEEECCCCEEEECCEE EVFNYDSESKLETILLNGKVKIGLGGPNMKNRREVILNPNEMLVFDKQANTVRVKTVNAE EEECCCCCCCEEEEEEECEEEEEECCCCCCCCCEEEECCCEEEEEECCCCEEEEEEECCH EYSGWRNGVLSFENERLSMILTRLEPWFGRKIKCPKEIAEKYRFTFKVRDESLERILFML HHCCHHCCCEEECCCHHHHHHHHHCHHCCCCCCCHHHHHHHHEEEEEECHHHHHHHHHHH SNTSPIKYREKDNEYELYIKGDK CCCCCEEEECCCCCEEEEEECCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA