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The map label for this gene is rpiB [H]

Identifier: 150008300

GI number: 150008300

Start: 1973593

End: 1974024

Strand: Direct

Name: rpiB [H]

Synonym: BDI_1669

Alternate gene names: 150008300

Gene position: 1973593-1974024 (Clockwise)

Preceding gene: 150008299

Following gene: 150008304

Centisome position: 41.02

GC content: 46.06

Gene sequence:

>432_bases
ATGGGTATAGTAGGTTTGTGTAGCGATCACGCTGGTTTTGAGTTAAAAGAATATATAAAGACAATCCTCGATGAAAGGGG
ATTGTCTTATAAAGATTTTGGAACTTATTCCTCTGACAGTTGCGATTATCCGGATTTCGCCCATCTGATGGGCAAGGCCG
TAGAAGCTGGTGAGGTTTATCCGGGAATAGCTGTCTGCGGTACAGGGAATGGCATTAGTATGACCTTGAACAAACATCGG
GGTGTCCGTGCCGCCTTATGCTGGCGAGAGGATATCGCGAAACTGGCACGTGAGCATAACGATGCGAACGTGTTATCAAT
GCCCGGTCGTTTTATCAGCAAGGAAGAGGCTAAGAAAATCGTTGAGATATTCTTGGATACACCTTTTGAGGGTGGTCGCC
ACCAACGTCGTATAGACAAGATCCCTTTGTAG

Upstream 100 bases:

>100_bases
AATCCTTCGGTTTCTCCGCCCCTTACAAAGTATTGGACGAGAAATTAGGTTTCACGGCTAAGAACGTTTATAACCAAGTA
AAAGAATTATTAGCATAAAG

Downstream 100 bases:

>100_bases
AGTCCGCGTAAAAGTCACTTTATAAAATAAAGAAGGCTCTCCCATGGTTCGCTTACCATTCGGAGAGCCTTTTCGTATCA
CCGTTTAAACGGCAACGTAC

Product: ribose 5-phosphate isomerase B

Products: NA

Alternate protein names: Phosphoriboisomerase B [H]

Number of amino acids: Translated: 143; Mature: 142

Protein sequence:

>143_residues
MGIVGLCSDHAGFELKEYIKTILDERGLSYKDFGTYSSDSCDYPDFAHLMGKAVEAGEVYPGIAVCGTGNGISMTLNKHR
GVRAALCWREDIAKLAREHNDANVLSMPGRFISKEEAKKIVEIFLDTPFEGGRHQRRIDKIPL

Sequences:

>Translated_143_residues
MGIVGLCSDHAGFELKEYIKTILDERGLSYKDFGTYSSDSCDYPDFAHLMGKAVEAGEVYPGIAVCGTGNGISMTLNKHR
GVRAALCWREDIAKLAREHNDANVLSMPGRFISKEEAKKIVEIFLDTPFEGGRHQRRIDKIPL
>Mature_142_residues
GIVGLCSDHAGFELKEYIKTILDERGLSYKDFGTYSSDSCDYPDFAHLMGKAVEAGEVYPGIAVCGTGNGISMTLNKHRG
VRAALCWREDIAKLAREHNDANVLSMPGRFISKEEAKKIVEIFLDTPFEGGRHQRRIDKIPL

Specific function: In addition to its activity on D-ribose 5-phosphate it probably also has activity on D-allose 6-phosphate [H]

COG id: COG0698

COG function: function code G; Ribose 5-phosphate isomerase RpiB

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the lacAB/rpiB family [H]

Homologues:

Organism=Escherichia coli, GI1790528, Length=134, Percent_Identity=47.7611940298507, Blast_Score=125, Evalue=8e-31,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003500
- InterPro:   IPR004785 [H]

Pfam domain/function: PF02502 LacAB_rpiB [H]

EC number: =5.3.1.6 [H]

Molecular weight: Translated: 15878; Mature: 15747

Theoretical pI: Translated: 6.67; Mature: 6.67

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.8 %Cys     (Translated Protein)
2.8 %Met     (Translated Protein)
5.6 %Cys+Met (Translated Protein)
2.8 %Cys     (Mature Protein)
2.1 %Met     (Mature Protein)
4.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MGIVGLCSDHAGFELKEYIKTILDERGLSYKDFGTYSSDSCDYPDFAHLMGKAVEAGEVY
CCCCCCCCCCCCCCHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCHHHHHHHHHHCCCCCC
PGIAVCGTGNGISMTLNKHRGVRAALCWREDIAKLAREHNDANVLSMPGRFISKEEAKKI
CCEEEEECCCCEEEEECCCCCCCHHHHHHHHHHHHHHHCCCCCEEECCCCCCCHHHHHHH
VEIFLDTPFEGGRHQRRIDKIPL
HHHHHCCCCCCCCCHHHHCCCCC
>Mature Secondary Structure 
GIVGLCSDHAGFELKEYIKTILDERGLSYKDFGTYSSDSCDYPDFAHLMGKAVEAGEVY
CCCCCCCCCCCCCHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCHHHHHHHHHHCCCCCC
PGIAVCGTGNGISMTLNKHRGVRAALCWREDIAKLAREHNDANVLSMPGRFISKEEAKKI
CCEEEEECCCCEEEEECCCCCCCHHHHHHHHHHHHHHHCCCCCEEECCCCCCCHHHHHHH
VEIFLDTPFEGGRHQRRIDKIPL
HHHHHCCCCCCCCCHHHHCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 8576032; 7610040; 9278503; 1840580; 7984428; 9401019 [H]