| Definition | Parabacteroides distasonis ATCC 8503 chromosome, complete genome. |
|---|---|
| Accession | NC_009615 |
| Length | 4,811,379 |
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The map label for this gene is 150008294
Identifier: 150008294
GI number: 150008294
Start: 1964332
End: 1966791
Strand: Reverse
Name: 150008294
Synonym: BDI_1663
Alternate gene names: NA
Gene position: 1966791-1964332 (Counterclockwise)
Preceding gene: 150008301
Following gene: 150008293
Centisome position: 40.88
GC content: 42.76
Gene sequence:
>2460_bases ATGCGGTCGTCCTATAAATATATCATACTCATACTCTTTGTGCTTATGCCCGGCTTGCTTTATTCCCAATCTCAAGATTG GGTACGTAAGTCCATTTATCCGCAAGCGGATAGTGGTAAAAGCAAGATCTATAATTGGATGTGGGGGAGGCATTATCGTC ACCTTTATACGATCCCGATCAGGGTTCCTTCGGCTACGATAGAAACGTTGGGGGGTGGGATGGATATCGTCGGGCAAGCG GAAGGGTTTCACGGATTATTGTTGGAGAATAAGCGTAAGCAATTGTATTTGCTAAAGCCCTTGGGTGGCTCTACAAGTTT CTTGGAGTCGAAGTTTTTCCGGGAAATATATAATAAGACTGATTTTAAGAATACATATTTGGATGAGTTCTTAGGAGATG CTTATACGATTATCAATCCCTATACCTTTTTGGTCGCAGATTATTTAGCGAAGTCCGCGGGATTGAGTTTTTCTCCCTCC CGTATTTACTATATTCCTTCCCACATACGGAAAGACACAGTTGCGGACGGCAGCGATATACAAGATAGGCTGGTCAATCT AATCAATGTTCCGGATATTAATTTAAGGTCTAATTTGTATACCACGGAAGACTTTCTAGACAGCCTTCAAGTGAGTAAAA ACTATATGGCGGATCAAAATCTATACATTCGGGAACGTATTTTCGATATGTGGACCGGAGATTGGAATAAGACGAACGAA AACTGGGAGTGGCAGTCACATACCGTCAATGATAGCGTAATTTATACCCCGATCGTGATCGATAGGAATCATGCTTTCAC GAAGGTGGACGGAGTATTGTTCAAGCAAATGTTGAAGATGTTATCGTTGGATTTTATCTGTAATTATGATAGCCTGATTT TAAAAGATACAAAGAAAATCAATAAGCTAGCTTTTGCGCTGGATATGGCGGTAGCAGGCCGCAGTGATGAGTCGGTTTGG ATACGCCAAGCCCAAGAAATTCGGAGACAGATGACCGACTCTTTGATCGATAGCGCTTTTACTTATTTGCCGGAAGGTGT AAAACATGATGAGATAGAACTGATTAAACGAAAGTTGAAACGAAGGAGGCTAGAGCTGGAAGCGGTTGCCAGCCAATATT ATCGCTTATTGCAACGTACGCCAGTGGTTGCCGGAACCAATCAATCCGATTATTTCTTGATCGAGCGGCAAGCGCCGGAC CGGACTGTTTTACGGATTTATGATCCCGAGACCGGAGACTGTAGGTTGGAACAACAATTCTCCGGCAAGGAAACCAAGGA ACTGTGGTTATATGGGCTTGCGGGAAACGATACGTTTGAAGTGAAGGGAAATACACGGAAAGATTTTCCGATATACTTGA TCTCCGGAGAGGGGGAGAACCAATACCAATTGAATCATAACCGGAAAATACATGTCTACGATAAAGATTATAAATATGAT TACCAAAAGATAAAATACCATAAGATATCTTTTACCCCGTGGGGAATATATGATTCGGATAAAGGTATTAGTTTGGGTAC GTTCTTTACATATACGATGTATGGCTTTAAACGAGCCCCATTCACCTATCAGCATCGGATCGGGTATAATTATTTGAAAG GGTTCATGTATGCAGGTATCTTCCCTAATTATGATGGCCGGAGACGTTTATACCTAAATGCCTCCATTTCTTCACCCCGT AACTTCGAGAACTTCTTCGGATTTGGAAATAATACGGCGGGCTATAAAGAGGAGAAAAAGAATTATAACCGGGTGAAGCT CCGGACGTATATGTTTAATCCATCCTTCGAGATGGATTTGAGGAAAGAAGAGGTGATGACATTCTTTGGCTCTTTGGATA TGTACAAGGCTAAACGTACGGATGATCGATATATTTATACGGTTTATGGAGAAGATCATCCTATTTTCCGCACGAATTAT TTCGTAGGTCTTGGCGCTACTTACCGGATAACGAAACAGCCTTATTCGTGGCTTCCCCTATTGGAAACCGAATGGACGGC CGGATGGAAAATGAATTTGAAAAAGCCGGAACGTAATTTCCCCTATGCGCAGGGAAGCCTTTCATGGAACGTACGGTTCT CGGATCGTTTTACTTGGGCCTCCTTGATGAAGGGAACGGTATTATTCGATAATGACTATGAGTTCTATCAAGCCGCCACG ATTGATTTAAGGGGATTCCGTGAGAACCGTTTTATCGGAAAGCAATCCTTTTACCAATACTCGGATTTACGCTTGGACAT GGGAAAACTAAAGAATCCGTTCACTCCCTTAAAATATGGTCTATTCGCGGGCTTTGATTATGGGCGGGTCTGGTTTCCCG GTGAGCGTTCCCATAGTTGGCATACTTCCTATGGTGGCGGGATTTGGCTTACTTTCTTGAATAAGTTCACCACTAAATAT TCTTGGTTCGGCTCGACGGATAGTTTCCGGTTCGCCTTTGAGTTGGGGCTTGGGTTTTGA
Upstream 100 bases:
>100_bases TTATACGTCAAGTCCTTGATTCTTCTCTTAGGCTAAAAAAACAAAACAACTCTTGTCTTACCCCTGTTATTAGTAAAACA AAGATAGAAAGAAATTGTCC
Downstream 100 bases:
>100_bases TATAGCCTCAAACCTACACGGGACTGATGAGGGAAATTCTCATCATGATAAGGAGGGTTATTGTCTATTTCTATATTTGT TCTTGTCTTCTGTCGTATGA
Product: putative outer membrane protein/protective antigen OMA87
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 819; Mature: 819
Protein sequence:
>819_residues MRSSYKYIILILFVLMPGLLYSQSQDWVRKSIYPQADSGKSKIYNWMWGRHYRHLYTIPIRVPSATIETLGGGMDIVGQA EGFHGLLLENKRKQLYLLKPLGGSTSFLESKFFREIYNKTDFKNTYLDEFLGDAYTIINPYTFLVADYLAKSAGLSFSPS RIYYIPSHIRKDTVADGSDIQDRLVNLINVPDINLRSNLYTTEDFLDSLQVSKNYMADQNLYIRERIFDMWTGDWNKTNE NWEWQSHTVNDSVIYTPIVIDRNHAFTKVDGVLFKQMLKMLSLDFICNYDSLILKDTKKINKLAFALDMAVAGRSDESVW IRQAQEIRRQMTDSLIDSAFTYLPEGVKHDEIELIKRKLKRRRLELEAVASQYYRLLQRTPVVAGTNQSDYFLIERQAPD RTVLRIYDPETGDCRLEQQFSGKETKELWLYGLAGNDTFEVKGNTRKDFPIYLISGEGENQYQLNHNRKIHVYDKDYKYD YQKIKYHKISFTPWGIYDSDKGISLGTFFTYTMYGFKRAPFTYQHRIGYNYLKGFMYAGIFPNYDGRRRLYLNASISSPR NFENFFGFGNNTAGYKEEKKNYNRVKLRTYMFNPSFEMDLRKEEVMTFFGSLDMYKAKRTDDRYIYTVYGEDHPIFRTNY FVGLGATYRITKQPYSWLPLLETEWTAGWKMNLKKPERNFPYAQGSLSWNVRFSDRFTWASLMKGTVLFDNDYEFYQAAT IDLRGFRENRFIGKQSFYQYSDLRLDMGKLKNPFTPLKYGLFAGFDYGRVWFPGERSHSWHTSYGGGIWLTFLNKFTTKY SWFGSTDSFRFAFELGLGF
Sequences:
>Translated_819_residues MRSSYKYIILILFVLMPGLLYSQSQDWVRKSIYPQADSGKSKIYNWMWGRHYRHLYTIPIRVPSATIETLGGGMDIVGQA EGFHGLLLENKRKQLYLLKPLGGSTSFLESKFFREIYNKTDFKNTYLDEFLGDAYTIINPYTFLVADYLAKSAGLSFSPS RIYYIPSHIRKDTVADGSDIQDRLVNLINVPDINLRSNLYTTEDFLDSLQVSKNYMADQNLYIRERIFDMWTGDWNKTNE NWEWQSHTVNDSVIYTPIVIDRNHAFTKVDGVLFKQMLKMLSLDFICNYDSLILKDTKKINKLAFALDMAVAGRSDESVW IRQAQEIRRQMTDSLIDSAFTYLPEGVKHDEIELIKRKLKRRRLELEAVASQYYRLLQRTPVVAGTNQSDYFLIERQAPD RTVLRIYDPETGDCRLEQQFSGKETKELWLYGLAGNDTFEVKGNTRKDFPIYLISGEGENQYQLNHNRKIHVYDKDYKYD YQKIKYHKISFTPWGIYDSDKGISLGTFFTYTMYGFKRAPFTYQHRIGYNYLKGFMYAGIFPNYDGRRRLYLNASISSPR NFENFFGFGNNTAGYKEEKKNYNRVKLRTYMFNPSFEMDLRKEEVMTFFGSLDMYKAKRTDDRYIYTVYGEDHPIFRTNY FVGLGATYRITKQPYSWLPLLETEWTAGWKMNLKKPERNFPYAQGSLSWNVRFSDRFTWASLMKGTVLFDNDYEFYQAAT IDLRGFRENRFIGKQSFYQYSDLRLDMGKLKNPFTPLKYGLFAGFDYGRVWFPGERSHSWHTSYGGGIWLTFLNKFTTKY SWFGSTDSFRFAFELGLGF >Mature_819_residues MRSSYKYIILILFVLMPGLLYSQSQDWVRKSIYPQADSGKSKIYNWMWGRHYRHLYTIPIRVPSATIETLGGGMDIVGQA EGFHGLLLENKRKQLYLLKPLGGSTSFLESKFFREIYNKTDFKNTYLDEFLGDAYTIINPYTFLVADYLAKSAGLSFSPS RIYYIPSHIRKDTVADGSDIQDRLVNLINVPDINLRSNLYTTEDFLDSLQVSKNYMADQNLYIRERIFDMWTGDWNKTNE NWEWQSHTVNDSVIYTPIVIDRNHAFTKVDGVLFKQMLKMLSLDFICNYDSLILKDTKKINKLAFALDMAVAGRSDESVW IRQAQEIRRQMTDSLIDSAFTYLPEGVKHDEIELIKRKLKRRRLELEAVASQYYRLLQRTPVVAGTNQSDYFLIERQAPD RTVLRIYDPETGDCRLEQQFSGKETKELWLYGLAGNDTFEVKGNTRKDFPIYLISGEGENQYQLNHNRKIHVYDKDYKYD YQKIKYHKISFTPWGIYDSDKGISLGTFFTYTMYGFKRAPFTYQHRIGYNYLKGFMYAGIFPNYDGRRRLYLNASISSPR NFENFFGFGNNTAGYKEEKKNYNRVKLRTYMFNPSFEMDLRKEEVMTFFGSLDMYKAKRTDDRYIYTVYGEDHPIFRTNY FVGLGATYRITKQPYSWLPLLETEWTAGWKMNLKKPERNFPYAQGSLSWNVRFSDRFTWASLMKGTVLFDNDYEFYQAAT IDLRGFRENRFIGKQSFYQYSDLRLDMGKLKNPFTPLKYGLFAGFDYGRVWFPGERSHSWHTSYGGGIWLTFLNKFTTKY SWFGSTDSFRFAFELGLGF
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 96520; Mature: 96520
Theoretical pI: Translated: 9.48; Mature: 9.48
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.2 %Cys (Translated Protein) 2.3 %Met (Translated Protein) 2.6 %Cys+Met (Translated Protein) 0.2 %Cys (Mature Protein) 2.3 %Met (Mature Protein) 2.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MRSSYKYIILILFVLMPGLLYSQSQDWVRKSIYPQADSGKSKIYNWMWGRHYRHLYTIPI CCCCHHHHHHHHHHHHHHHHHCCCHHHHHHHCCCCCCCCHHHHHHHHCCCCCCEEEEEEE RVPSATIETLGGGMDIVGQAEGFHGLLLENKRKQLYLLKPLGGSTSFLESKFFREIYNKT ECCCHHHHHCCCCEEEEECCCCCEEEEEECCCCEEEEEEECCCCHHHHHHHHHHHHHCCC DFKNTYLDEFLGDAYTIINPYTFLVADYLAKSAGLSFSPSRIYYIPSHIRKDTVADGSDI CCCHHHHHHHHCCEEEECCHHHHHHHHHHHHHCCCCCCCCEEEECCCCCCCCCCCCCCCH QDRLVNLINVPDINLRSNLYTTEDFLDSLQVSKNYMADQNLYIRERIFDMWTGDWNKTNE HHHHHHHHCCCCCCCCCCCEEHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHCCCCCCCCC NWEWQSHTVNDSVIYTPIVIDRNHAFTKVDGVLFKQMLKMLSLDFICNYDSLILKDTKKI CCCCCCEECCCCEEEEEEEEECCCCHHHHHHHHHHHHHHHHCHHEEECCCCEEEHHHHHH NKLAFALDMAVAGRSDESVWIRQAQEIRRQMTDSLIDSAFTYLPEGVKHDEIELIKRKLK HHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHH RRRLELEAVASQYYRLLQRTPVVAGTNQSDYFLIERQAPDRTVLRIYDPETGDCRLEQQF HHHHHHHHHHHHHHHHHHHCCCEECCCCCCEEEEEECCCCCEEEEEECCCCCCEEEECCC SGKETKELWLYGLAGNDTFEVKGNTRKDFPIYLISGEGENQYQLNHNRKIHVYDKDYKYD CCCCCEEEEEEEECCCCEEEECCCCCCCCEEEEEECCCCCEEEECCCCEEEEEECCCCCC YQKIKYHKISFTPWGIYDSDKGISLGTFFTYTMYGFKRAPFTYQHRIGYNYLKGFMYAGI CEEEEEEEEECCCCCCCCCCCCCEEHHHHHHHHHCEECCCEEEEHHCCHHHHHHHHHCCC FPNYDGRRRLYLNASISSPRNFENFFGFGNNTAGYKEEKKNYNRVKLRTYMFNPSFEMDL CCCCCCCEEEEEEECCCCCCCCHHHCCCCCCCCCCCHHHCCCCEEEEEEEEECCCCCCCC RKEEVMTFFGSLDMYKAKRTDDRYIYTVYGEDHPIFRTNYFVGLGATYRITKQPYSWLPL CHHHHHHHHCCCHHEECCCCCCCEEEEEECCCCCEEEEEEEEECCCEEEEECCCCCCCCE LETEWTAGWKMNLKKPERNFPYAQGSLSWNVRFSDRFTWASLMKGTVLFDNDYEFYQAAT EECCCCCCEEEECCCCCCCCCCCCCCEEEEEEECCCCCHHHHHCCEEEECCCCCEEEEEE IDLRGFRENRFIGKQSFYQYSDLRLDMGKLKNPFTPLKYGLFAGFDYGRVWFPGERSHSW EEEECCCCCCCCCHHHHHHHHCCEEEHHHCCCCCCCHHHHHHCCCCCCEEECCCCCCCCC HTSYGGGIWLTFLNKFTTKYSWFGSTDSFRFAFELGLGF CCCCCCCEEEEEHHHHHHEEEECCCCCCEEEEEEECCCC >Mature Secondary Structure MRSSYKYIILILFVLMPGLLYSQSQDWVRKSIYPQADSGKSKIYNWMWGRHYRHLYTIPI CCCCHHHHHHHHHHHHHHHHHCCCHHHHHHHCCCCCCCCHHHHHHHHCCCCCCEEEEEEE RVPSATIETLGGGMDIVGQAEGFHGLLLENKRKQLYLLKPLGGSTSFLESKFFREIYNKT ECCCHHHHHCCCCEEEEECCCCCEEEEEECCCCEEEEEEECCCCHHHHHHHHHHHHHCCC DFKNTYLDEFLGDAYTIINPYTFLVADYLAKSAGLSFSPSRIYYIPSHIRKDTVADGSDI CCCHHHHHHHHCCEEEECCHHHHHHHHHHHHHCCCCCCCCEEEECCCCCCCCCCCCCCCH QDRLVNLINVPDINLRSNLYTTEDFLDSLQVSKNYMADQNLYIRERIFDMWTGDWNKTNE HHHHHHHHCCCCCCCCCCCEEHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHCCCCCCCCC NWEWQSHTVNDSVIYTPIVIDRNHAFTKVDGVLFKQMLKMLSLDFICNYDSLILKDTKKI CCCCCCEECCCCEEEEEEEEECCCCHHHHHHHHHHHHHHHHCHHEEECCCCEEEHHHHHH NKLAFALDMAVAGRSDESVWIRQAQEIRRQMTDSLIDSAFTYLPEGVKHDEIELIKRKLK HHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHH RRRLELEAVASQYYRLLQRTPVVAGTNQSDYFLIERQAPDRTVLRIYDPETGDCRLEQQF HHHHHHHHHHHHHHHHHHHCCCEECCCCCCEEEEEECCCCCEEEEEECCCCCCEEEECCC SGKETKELWLYGLAGNDTFEVKGNTRKDFPIYLISGEGENQYQLNHNRKIHVYDKDYKYD CCCCCEEEEEEEECCCCEEEECCCCCCCCEEEEEECCCCCEEEECCCCEEEEEECCCCCC YQKIKYHKISFTPWGIYDSDKGISLGTFFTYTMYGFKRAPFTYQHRIGYNYLKGFMYAGI CEEEEEEEEECCCCCCCCCCCCCEEHHHHHHHHHCEECCCEEEEHHCCHHHHHHHHHCCC FPNYDGRRRLYLNASISSPRNFENFFGFGNNTAGYKEEKKNYNRVKLRTYMFNPSFEMDL CCCCCCCEEEEEEECCCCCCCCHHHCCCCCCCCCCCHHHCCCCEEEEEEEEECCCCCCCC RKEEVMTFFGSLDMYKAKRTDDRYIYTVYGEDHPIFRTNYFVGLGATYRITKQPYSWLPL CHHHHHHHHCCCHHEECCCCCCCEEEEEECCCCCEEEEEEEEECCCEEEEECCCCCCCCE LETEWTAGWKMNLKKPERNFPYAQGSLSWNVRFSDRFTWASLMKGTVLFDNDYEFYQAAT EECCCCCCEEEECCCCCCCCCCCCCCEEEEEEECCCCCHHHHHCCEEEECCCCCEEEEEE IDLRGFRENRFIGKQSFYQYSDLRLDMGKLKNPFTPLKYGLFAGFDYGRVWFPGERSHSW EEEECCCCCCCCCHHHHHHHHCCEEEHHHCCCCCCCHHHHHHCCCCCCEEECCCCCCCCC HTSYGGGIWLTFLNKFTTKYSWFGSTDSFRFAFELGLGF CCCCCCCEEEEEHHHHHHEEEECCCCCCEEEEEEECCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA