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The map label for this gene is ytfH [C]

Identifier: 150008290

GI number: 150008290

Start: 1960088

End: 1960441

Strand: Reverse

Name: ytfH [C]

Synonym: BDI_1659

Alternate gene names: 150008290

Gene position: 1960441-1960088 (Counterclockwise)

Preceding gene: 150008292

Following gene: 150008288

Centisome position: 40.75

GC content: 45.76

Gene sequence:

>354_bases
ATGAAAAACTTTCATCCGACAGGGAATTGCCCCGTAAGAGACGTATTGAGCCGGCTAGGAGATAAATGGTCTATGCTAGT
GCTTATCACTTTAAGTGCTAACGGTACCATGCGTTTTAGTGATATCCATAAAACCATTGCGGATGTATCGCAACGTATGC
TGACCGTAACCTTGCGCACGTTGGAATCGGATGGTCTGATCGAACGAAAGGTCTATGCGGAAGTTCCTCCCCGAGTAGAA
TACTGCTTAACGGAAAGAGGATTAAGTCTTATTCCCCATATCCAAGGCTTGGTGGATTGGGCGTTGCAGCAGATGAGTGG
TATTATGGAAAGCCGGGTTTTACATACGTCATGA

Upstream 100 bases:

>100_bases
TAAGTCCCTTTTTTAGAGAAAACAAGAAGGCACTTATAAATAAGGAACTTACATGGATGTAACCATTGTTGAGATTCAAG
TAAATAGAAAAGGTTAAAAA

Downstream 100 bases:

>100_bases
CTTGCTCTGGCATTAATCTATCAGTGAGCTTTTTCTGCAAAAATATCTGCCAGCGACCGTTGGGTTAATTTACTCTCAAT
CCAAGCAAGGACATCAAATG

Product: putative transcriptional regulator

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 117; Mature: 117

Protein sequence:

>117_residues
MKNFHPTGNCPVRDVLSRLGDKWSMLVLITLSANGTMRFSDIHKTIADVSQRMLTVTLRTLESDGLIERKVYAEVPPRVE
YCLTERGLSLIPHIQGLVDWALQQMSGIMESRVLHTS

Sequences:

>Translated_117_residues
MKNFHPTGNCPVRDVLSRLGDKWSMLVLITLSANGTMRFSDIHKTIADVSQRMLTVTLRTLESDGLIERKVYAEVPPRVE
YCLTERGLSLIPHIQGLVDWALQQMSGIMESRVLHTS
>Mature_117_residues
MKNFHPTGNCPVRDVLSRLGDKWSMLVLITLSANGTMRFSDIHKTIADVSQRMLTVTLRTLESDGLIERKVYAEVPPRVE
YCLTERGLSLIPHIQGLVDWALQQMSGIMESRVLHTS

Specific function: Unknown

COG id: COG1733

COG function: function code K; Predicted transcriptional regulators

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 HTH hxlR-type DNA-binding domain [H]

Homologues:

Organism=Escherichia coli, GI87082391, Length=92, Percent_Identity=42.3913043478261, Blast_Score=84, Evalue=3e-18,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR002577
- InterPro:   IPR011991 [H]

Pfam domain/function: PF01638 DUF24 [H]

EC number: NA

Molecular weight: Translated: 13223; Mature: 13223

Theoretical pI: Translated: 8.25; Mature: 8.25

Prosite motif: PS51118 HTH_HXLR

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.7 %Cys     (Translated Protein)
5.1 %Met     (Translated Protein)
6.8 %Cys+Met (Translated Protein)
1.7 %Cys     (Mature Protein)
5.1 %Met     (Mature Protein)
6.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKNFHPTGNCPVRDVLSRLGDKWSMLVLITLSANGTMRFSDIHKTIADVSQRMLTVTLRT
CCCCCCCCCCCHHHHHHHCCCCEEEEEEEEECCCCEEEHHHHHHHHHHHHHHHHHHHHHH
LESDGLIERKVYAEVPPRVEYCLTERGLSLIPHIQGLVDWALQQMSGIMESRVLHTS
HCCCCCCHHHHHHCCCCHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCC
>Mature Secondary Structure
MKNFHPTGNCPVRDVLSRLGDKWSMLVLITLSANGTMRFSDIHKTIADVSQRMLTVTLRT
CCCCCCCCCCCHHHHHHHCCCCEEEEEEEEECCCCEEEHHHHHHHHHHHHHHHHHHHHHH
LESDGLIERKVYAEVPPRVEYCLTERGLSLIPHIQGLVDWALQQMSGIMESRVLHTS
HCCCCCCHHHHHHCCCCHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9371463 [H]